DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SPHAL (ATP synthase subunit beta OS=Sphingopyxis alaskensis GN=atpD PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 2.846e-52 Identity = 104/165 (63.03%), Postives = 129/165 (78.18%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 G++ QVIGAVVDV+F LP IL ALE ++ RLVLEVAQH+GE VRTIAMD T+GL RGQ V +TG+ I+VPVG TLGRI+NVIGEPIDE+G + ++ PIH +AP FV+Q+TE ILVTGIKV+DL+APY +GGKIGLFGGAGVGK L+ L+ + + Sbjct: 41 GRIAQVIGAVVDVQFTGELPAILNALETDNNGNRLVLEVAQHLGENTVRTIAMDATDGLTRGQPVRDTGAQISVPVGPQTLGRILNVIGEPIDERGPVNSDMTAPIHAKAPEFVDQSTEASILVTGIKVIDLIAPYAKGGKIGLFGGAGVGKTVLIQELINNIAK 205 HSP 2 Score: 73.559 bits (179), Expect = 2.879e-12 Identity = 60/145 (41.38%), Postives = 71/145 (48.97%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINL---GEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINN+AK HGG SVFAGVGERT EGNDLY + + GVI G + L + P A AR GL + + FR+ EG + F F F TQ + LG P VGY G+L R Sbjct: 192 KTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKDADGNPTPDGSKVALVFGQMNEPPGARARVALS-GLTMAEYFRDQEG-QDVLFFVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLSTDMGALQER 331
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_GEOSL (ATP synthase subunit beta OS=Geobacter sulfurreducens GN=atpD PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 2.846e-52 Identity = 108/173 (62.43%), Postives = 128/173 (73.99%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 + G++ QVIGAV+DV F+ G LPPI AL V D LVLEVAQH+GE VRTIAMD T+GLVRGQ VL+TG I+VPVGR TLGRI+NVIGEP+DE G + E IHREAPAFV+Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGK L+ L+ + + Sbjct: 4 NFGKISQVIGAVIDVEFEPGKLPPIYNALRVTNPAIDDKEYNLVLEVAQHLGENAVRTIAMDSTDGLVRGQAVLDTGKQISVPVGRKTLGRILNVIGEPVDEMGPVNAEKEYGIHREAPAFVDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAK 176 HSP 2 Score: 76.6406 bits (187), Expect = 3.401e-13 Identity = 60/143 (41.96%), Postives = 76/143 (53.15%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGE-QQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINN+AK HGGFSVFAGVGERT EGNDL+ +M + GV++ G+ P ++A+ VAL+ L + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 163 KTVLIMELINNIAKQHGGFSVFAGVGERTREGNDLWMEMKESGVLDKAALVYGQMNEPPGARAR-----VALS------ALSIAEYFRDEEG-QNVLLFVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATEMGELQER 290
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_FRASC (ATP synthase subunit beta OS=Frankia sp. (strain CcI3) GN=atpD PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 3.494e-52 Identity = 89/166 (53.61%), Postives = 117/166 (70.48%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRF-DEGLPPILTALEVV----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG+V +VIG VVDV F + LP I AL+V D ++ L LEVAQH+G+ VR I+M T+GLVRG V +TG+PI+VPVG T G + NV+G P+D K ++ E Y PIHR APAF + ++ ++ TGIKV+DLLAPY RGGKIGLFGGAGVGK ++ ++ Sbjct: 18 IGRVARVIGPVVDVEFAPDELPEIYQALQVDRTIGDETLTLTLEVAQHIGDNTVRAISMQQTDGLVRGAPVHDTGAPISVPVGDATKGHVFNVLGTPLDVK-QIEAETYWPIHRSAPAFDQLESKTEMFTTGIKVIDLLAPYVRGGKIGLFGGAGVGKTVIIQEMI 182 HSP 2 Score: 61.2326 bits (147), Expect = 3.494e-52 Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTV+I E+I VAK GG SVFAGVGERT EGNDL+ +M + GVI Sbjct: 174 KTVIIQEMIRRVAKEFGGVSVFAGVGERTREGNDLFLEMTEAGVI 218
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LACJO (ATP synthase subunit beta OS=Lactobacillus johnsonii GN=atpD PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 3.494e-52 Identity = 91/169 (53.85%), Postives = 121/169 (71.60%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF--DEGLPPILTALEVVDHSV-RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDE----KGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV F D+ LP I AL V +++ LVLEV +G+GV+RTI+M+ T+GL RG V +TG+PI+VPVG+ TLGR+ NV+G+PID D+K E IH+EAP + E +T ++IL TGIKV+DLL PY RGGK+GLFGGAGVGK ++ L+ Sbjct: 2 SKGEIVQVIGPVVDVEFPLDKDLPDINNALRVTNNNGDTLVLEVTLELGDGVLRTISMESTDGLRRGMEVEDTGAPISVPVGKDTLGRVFNVLGDPIDGGPALGKDVKRE---GIHKEAPKYDELSTSEEILETGIKVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELI 167 HSP 2 Score: 64.3142 bits (155), Expect = 3.494e-52 Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KT +I ELI+N+A+ HGG SVF GVGERT EGNDLY +M GV++ G+ P ++ + VAL GL + + FR+ EG Sbjct: 159 KTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG 239
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LACBA (ATP synthase subunit beta OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=atpD PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.495e-52 Identity = 93/166 (56.02%), Postives = 116/166 (69.88%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF--DEGLPPILTALEVV-DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV F ++ LP I TAL + D LV EVA +G+GV+RTIAMDGT+GL RG V NTG+ I+VPVG TLGR+ NV+G+PID + + +PIHR+AP + E +IL TGIKV+DLL PY RGGKIGLFGGAGVGK L+ L+ Sbjct: 2 SAGKIVQVIGPVVDVEFPLNDELPDINTALNIKKDDGSVLVTEVALELGDGVMRTIAMDGTDGLRRGLEVENTGASISVPVGDDTLGRVFNVLGDPIDGGAEFGPDAERMPIHRDAPKYDELNPTTEILETGIKVIDLLEPYVRGGKIGLFGGAGVGKTVLIQELI 167 HSP 2 Score: 62.3882 bits (150), Expect = 3.495e-52 Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLI ELI+N+A+ H G SVF GVGERT EGND+Y +M GV+ Sbjct: 159 KTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYWEMKGSGVL 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ENTHR (ATP synthase subunit beta OS=Enterococcus hirae GN=atpD PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 3.495e-52 Identity = 87/168 (51.79%), Postives = 116/168 (69.05%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF--DEGLPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV F D+ LP I AL V + ++VLE A +G+GV+RTIAM+ T+GL RG V++TG I+VPVG+ TLGR+ NV+G+ ID + IH++AP+F E +T +IL TGIKV+DLLAPY +GGK+GLFGGAGVGK L+ L+ Sbjct: 2 SSGKIVQVIGPVVDVEFSLDQSLPDINNALVVYKNDEKKSKVVLETALELGDGVIRTIAMESTDGLQRGMEVIDTGKAISVPVGKDTLGRVFNVLGDTIDLGSSFPEDAERSEIHKKAPSFDELSTSTEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELI 169 HSP 2 Score: 67.781 bits (164), Expect = 3.495e-52 Identity = 57/143 (39.86%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M GVI G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYYEMKDSGVIEKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 288
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PARUW (ATP synthase subunit beta OS=Protochlamydia amoebophila (strain UWE25) GN=atpD PE=3 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 3.495e-52 Identity = 79/165 (47.88%), Postives = 117/165 (70.91%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVR--LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G+V Q++G +D+ F G LP IL A++++D + L+ EVA H+G+ VR IA+ T+GLVR + ++T +PI++PVG TLGR++NV+G+PIDE G ++ PIH+ +P F EQ T+ I TGIKV+DLL PY +GGK+GLFGGAGVGK ++ L+ Sbjct: 2 AVGKVKQIVGPTLDIEFPPGQLPNILNAIKIIDPKDQRELIAEVAMHLGDNQVRCIALSSTDGLVREAQAVDTEAPISIPVGSPTLGRLLNVLGQPIDEMGAIENAEISPIHKASPTFEEQDTQGVIFETGIKVIDLLCPYTKGGKVGLFGGAGVGKSVIVMELI 166 HSP 2 Score: 63.5438 bits (153), Expect = 3.495e-52 Identity = 26/46 (56.52%), Postives = 39/46 (84.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 K+V++MELI+N+A HGG+SVF G+GERT EGNDL+ +M + G+++ Sbjct: 158 KSVIVMELIHNIATHHGGYSVFCGIGERTREGNDLWLEMKESGILS 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PARDP (ATP synthase subunit beta OS=Paracoccus denitrificans (strain Pd 1222) GN=atpD PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 3.717e-52 Identity = 104/166 (62.65%), Postives = 126/166 (75.90%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQRL 785 G++ QVIGAVVDV+FD LP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRG V +TG PI VPVG TLGRI+NV+GEP+DE G ++ IH++AP F QAT +ILVTGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ + ++ Sbjct: 6 GKITQVIGAVVDVQFDGQLPAILNALETENNGKRLVLEVAQHLGENTVRTIAMDATEGLVRGLPVKDTGGPIMVPVGDATLGRILNVVGEPVDEGGPVEATQTRAIHQQAPDFAAQATASEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKV 171 HSP 2 Score: 76.6406 bits (187), Expect = 3.401e-13 Identity = 46/94 (48.94%), Postives = 59/94 (62.77%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI---NLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVLIMELINN+AK H G+SVFAGVGERT EGNDLY +M++ GVI +L + Q +++ VAL GL + + FR+A G Sbjct: 157 KTVLIMELINNIAKVHSGYSVFAGVGERTREGNDLYHEMVESGVIKPDDLSKSQVALVYGQMNEPPGARMRVALT------GLTVAEQFRDATG 244
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LACGA (ATP synthase subunit beta OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=atpD PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 4.555e-52 Identity = 90/167 (53.89%), Postives = 120/167 (71.86%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF--DEGLPPILTALEVVDHSV-RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDE----KGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIG VVDV F D+ LP I AL V +++ LVLEV +G+GV+RTI+M+ T+GL RG V +TG+PI+VPVG+ TLGR+ NV+G+PID D+K E IH+EAP + E +T ++IL TGIKV+DLL PY RGGK+GLFGGAGVGK ++ L+ Sbjct: 4 GEIVQVIGPVVDVEFPLDKDLPDINNALRVTNNNGDTLVLEVTLELGDGVLRTISMESTDGLRRGMEVEDTGAPISVPVGKDTLGRVFNVLGDPIDGGPALGKDVKRE---GIHKEAPKYDELSTSEEILETGIKVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELI 167 HSP 2 Score: 64.3142 bits (155), Expect = 4.555e-52 Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KT +I ELI+N+A+ HGG SVF GVGERT EGNDLY +M GV++ G+ P ++ + VAL GL + + FR+ EG Sbjct: 159 KTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG 239
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_NAUPA (ATP synthase subunit beta OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=atpD PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 4.556e-52 Identity = 86/166 (51.81%), Postives = 113/166 (68.07%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTAL----EVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID--EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V Q++G VVDV F+ +P I AL E ++VLEVA +G+ +VRTIAMD T+GL RG++V+ TG+PI VPVG LGRI NV G+ ID E+ T + IHR+AP F EQ+T+ ++ TGIKVVDLL PY +GGK GLFGGAGVGK ++ L+ Sbjct: 3 GKVLQILGPVVDVEFEGDIPAINEALYVEFEAEGEKKKVVLEVAAQIGDHIVRTIAMDLTDGLTRGEKVVATGAPIKVPVGEAVLGRIFNVTGDVIDGGEEVPADTPRW-SIHRDAPPFEEQSTKMEVFETGIKVVDLLCPYMKGGKTGLFGGAGVGKTVIIMELI 167 HSP 2 Score: 68.5514 bits (166), Expect = 4.556e-52 Identity = 32/46 (69.57%), Postives = 39/46 (84.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV+IMELI+NVA H G+SVFAGVGERT EGNDLY +M + GV++ Sbjct: 159 KTVIIMELIHNVAYKHSGYSVFAGVGERTREGNDLYHEMKESGVLD 204 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |