DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_EDWI9 (ATP synthase subunit beta OS=Edwardsiella ictaluri (strain 93-146) GN=atpD PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 5.940e-52 Identity = 84/161 (52.17%), Postives = 114/161 (70.81%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG V + PI VPVG+ TLGRIMNV+G+P+D KG++ E IHR AP++ + + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVKGGATKLVLEVQQQLGGGVVRCIAMGSSDGLRRGLDVEDQNHPIEVPVGKATLGRIMNVLGDPVDMKGEIGEEERWAIHRAAPSYEDLSNSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 59.6918 bits (143), Expect = 5.940e-52 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RHOBL (ATP synthase subunit beta OS=Rhodopseudomonas blastica GN=atpD PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 6.340e-52 Identity = 103/168 (61.31%), Postives = 129/168 (76.79%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQRL 785 S G+V QVIGAVVDV+F+ LP IL ALE ++ +L+LEVAQH+GE VR IAMD TEGLVRG V ++G+PI+VPVG TLGRI+NV+GEPIDE+G + IH++AP F Q+TE QILVTGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ + ++ Sbjct: 8 SKGKVTQVIGAVVDVQFEGVLPAILNALETTNNGKKLILEVAQHLGENTVRCIAMDATEGLVRGAPVSDSGTPISVPVGNATLGRILNVVGEPIDERGPIAATEKRAIHQKAPDFQSQSTESQILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIQELINNIAKV 175 HSP 2 Score: 78.9518 bits (193), Expect = 6.853e-14 Identity = 60/142 (42.25%), Postives = 72/142 (50.70%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINN+AK H G+SVFAGVGERT EGNDLY + ++ GVIN+ + E+ L + P A AR GL L + FR+ G F F F TQ + LG P VGY G L R Sbjct: 161 KTVLIQELINNIAKVHSGYSVFAGVGERTREGNDLYHEFIESGVINIDDL--EKSKVALVYGQMNEPPGARARVALT-GLTLAEQFRDQSGTDVLF-FVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATDMGQLQER 295
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB2_PSEA6 (ATP synthase subunit beta 2 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=atpD2 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.009e-51 Identity = 86/164 (52.44%), Postives = 116/164 (70.73%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVR-LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G+V Q+IGAVVD+ F + +P I AL + + ++ L LEV Q +G GVVRTIA+ T+GL RG V NTG I VPVG+ TLGRIM+V+G PIDE G + E + IHREAP + +Q++ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SQGKVVQIIGAVVDIEFPQDSVPKIYDALRITEGDLQGLTLEVQQQLGGGVVRTIALGTTDGLRRGLTVDNTGEAIQVPVGKATLGRIMDVLGNPIDEAGPIGEEERMSIHREAPTYEDQSSSIELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 165 HSP 2 Score: 60.077 bits (144), Expect = 1.009e-51 Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M + V++ Sbjct: 157 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLD 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PASMU (ATP synthase subunit beta OS=Pasteurella multocida GN=atpD PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.009e-51 Identity = 85/161 (52.80%), Postives = 113/161 (70.19%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAV+DV F + +P + AL V LVLEV Q +G GVVR IAM ++GL RG V NT +PI+VPVG TLGRIMNV+GEPIDE+G++ E IHR P++ EQ+ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVIDVEFPQDAVPKVYDALNV---ETGLVLEVQQQLGGGVVRCIAMGSSDGLKRGLSVTNTNNPISVPVGTKTLGRIMNVLGEPIDEQGEIGAEENWSIHRAPPSYEEQSNSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 161 HSP 2 Score: 59.6918 bits (143), Expect = 1.009e-51 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 153 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 198
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ALTMD (ATP synthase subunit beta OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=atpD PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.316e-51 Identity = 86/164 (52.44%), Postives = 116/164 (70.73%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVR-LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G+V Q+IGAVVD+ F + +P + AL V + + L LEV Q +G GVVR IA+ T+GL RG V NTG+PI VPVG TLGRIM+V+G PIDE G + E + IHREAP++ +Q++ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SQGKVVQIIGAVVDIEFPQDAVPRVYDALRVTEGDLSGLTLEVQQQLGGGVVRGIALGTTDGLKRGLTVENTGNPIMVPVGTKTLGRIMDVLGNPIDEAGPIGEEERMSIHREAPSYEDQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 165 HSP 2 Score: 60.4622 bits (145), Expect = 1.316e-51 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H GFSVFAGVGERT EGND Y +M V++ Sbjct: 157 KTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMNDSNVLD 202
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_MAGSA (ATP synthase subunit beta OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=atpD PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.412e-51 Identity = 102/167 (61.08%), Postives = 129/167 (77.25%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 ++G + QV+GAVVDVRFD LP IL+AL + +LVLEVAQH+GE VRTIAMD T+GL RG V++TG+ I +PVG TLGRI+NVIGEPIDE+G + + LPIH +AP FV+Q+TE +ILVTGIKV+DLLAPY +GGKIGL GGAGVGK L+ L+ + + Sbjct: 5 NVGTITQVLGAVVDVRFDGQLPAILSALHLEHQGKKLVLEVAQHLGESTVRTIAMDSTDGLTRGTEVVDTGAAIQMPVGPETLGRIINVIGEPIDERGPIGNKTTLPIHADAPEFVDQSTETEILVTGIKVIDLLAPYCKGGKIGLCGGAGVGKTVLIMELINNIAK 171 HSP 2 Score: 84.7297 bits (208), Expect = 1.249e-15 Identity = 64/142 (45.07%), Postives = 76/142 (53.52%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINN+AKAHGG+SVFAGVGERT EGNDLY +M++ GVI L G L + P A AR GL + + FR+ EG + F F F TQ + LG P VGY G+L R Sbjct: 158 KTVLIMELINNIAKAHGGYSVFAGVGERTREGNDLYHEMIESGVIKL---DGPGSKVALVYGQMNEPPGARARVALS-GLTVAEYFRDVEG-QDVLFFVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATDMGALQER 291
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_GEOSF (ATP synthase subunit beta OS=Geobacter sp. (strain FRC-32) GN=atpD PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.412e-51 Identity = 107/173 (61.85%), Postives = 129/173 (74.57%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 +IG++ QVIGAV+DV F+ G LPPI AL V D+ LVLEVAQH+GE VRTIAMD T+GLVRGQ VL+TG I+VPVGR TLGRI+NVIGEP+DE G + + IHREAP FV+Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGK L+ L+ + + Sbjct: 4 NIGKISQVIGAVIDVEFEPGKLPPIYNALRVTNPAIDDNENNLVLEVAQHLGENSVRTIAMDSTDGLVRGQAVLDTGKQISVPVGRKTLGRILNVIGEPVDEMGPVNADKEYGIHREAPEFVDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAK 176 HSP 2 Score: 76.6406 bits (187), Expect = 3.401e-13 Identity = 60/143 (41.96%), Postives = 76/143 (53.15%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGE-QQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINN+AK HGGFSVFAGVGERT EGNDL+ +M + GV++ G+ P ++A+ VAL+ L + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 163 KTVLIMELINNIAKQHGGFSVFAGVGERTREGNDLWMEMKESGVLDKAALVYGQMNEPPGARAR-----VALS------ALSIAEYFRDEEG-QNVLLFIDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATEMGELQER 290
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PSEE4 (ATP synthase subunit beta OS=Pseudomonas entomophila (strain L48) GN=atpD PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.715e-51 Identity = 86/163 (52.76%), Postives = 114/163 (69.94%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F + +P + AL+V LEV Q +G+GVVRTIAM TEGL RG V++T + I+VPVG+ TLGRIM+V+G PIDE G + E IHR+AP+F EQA +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SSGRIVQIIGAVIDVEFPRDAVPSVYNALKV--QGAETTLEVQQQLGDGVVRTIAMGSTEGLKRGLDVVDTKAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERRGIHRKAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 59.6918 bits (143), Expect = 1.715e-51 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 154 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ACHLI (ATP synthase subunit beta OS=Acholeplasma laidlawii (strain PG-8A) GN=atpD PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.235e-51 Identity = 82/161 (50.93%), Postives = 114/161 (70.81%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEV-VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ +IG VVDV F + LP I ALEV + + LEVA H+G +VRTI+++ T+GL RG V+ T SPI VPVG+ LGR++NV+G+P+D ++ T+ Y+PIH+ P F + E +IL TGIKV+DL+APY +GGKIGLFGGAGVGK L+ ++ Sbjct: 3 GKIVAIIGPVVDVSFMDELPNINDALEVRLSETETRTLEVASHLGNHMVRTISLEATDGLARGMEVIGTLSPIKVPVGKKVLGRMLNVLGKPMDGLDEVDTKRYMPIHKLPPDFHDLGGETEILETGIKVIDLIAPYIKGGKIGLFGGAGVGKTVLIQEMI 163 HSP 2 Score: 62.3882 bits (150), Expect = 2.235e-51 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLI E+I+NVAK HGG SVF GVGER EG++LY +M GV++ Sbjct: 155 KTVLIQEMIHNVAKNHGGISVFTGVGERVREGHELYHEMKDSGVLD 200
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SILST (ATP synthase subunit beta OS=Silicibacter sp. (strain TM1040) GN=atpD PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 2.409e-51 Identity = 100/166 (60.24%), Postives = 128/166 (77.11%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQRL 785 G+V Q+IGAVVDV+FD LP IL AL ++ +LVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI++PVG TLGRI+NV+GEP+DE + + IH+ AP F +Q+TE ++LVTGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ + ++ Sbjct: 6 GKVTQIIGAVVDVQFDGELPAILNALTTDNNGKKLVLEVAQHLGENSVRTIAMDATEGLVRGQEVTDTGAPISIPVGNATLGRILNVVGEPVDEGEPIVAKETRAIHQPAPEFNDQSTESEVLVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKV 171 HSP 2 Score: 77.411 bits (189), Expect = 1.994e-13 Identity = 50/99 (50.51%), Postives = 61/99 (61.62%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI---NLGEQQ-----GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVLIMELINN+AK H G+SVFAGVGERT EGNDLY +M++ VI NL E Q G+ P ++A+ VAL GL L + FR+ G Sbjct: 157 KTVLIMELINNIAKVHSGYSVFAGVGERTREGNDLYHEMIESNVIKPDNLEESQVALVYGQMNEPPGARAR-----VALT------GLTLAEQFRDQSG 244 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |