DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_TROWT (ATP synthase subunit beta OS=Tropheryma whipplei (strain Twist) GN=atpD PE=3 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 2.913e-51 Identity = 84/168 (50.00%), Postives = 117/168 (69.64%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEV-VDHS---VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKG-DLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G++ +V G+VVDV F LP + AL+ V+ S + + LEVAQH+G+ +VRT+AM T+GL+RGQ VL+TG ITVPVG T GR+ NV+GE ++ G D+K + Y IHR+ P F ++ Q+ TGIKV+DLL PY +GGKIGLFGGAGVGK L+ ++ Sbjct: 5 AVGRIVRVTGSVVDVEFSRNNLPGVFNALKTRVNRSGKEIEITLEVAQHLGDDLVRTVAMQSTDGLIRGQEVLDTGGHITVPVGDATKGRVFNVVGEVLNSNGEDIKFDEYWSIHRKPPEFSLLESKTQLFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMI 172 HSP 2 Score: 63.1586 bits (152), Expect = 2.913e-51 Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLI E+I VA+ HGG SVFAGVGERT EGNDL R+M GV + Sbjct: 164 KTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIREMQDAGVFD 209
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_TROW8 (ATP synthase subunit beta OS=Tropheryma whipplei (strain TW08/27) GN=atpD PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.913e-51 Identity = 84/168 (50.00%), Postives = 117/168 (69.64%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEV-VDHS---VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKG-DLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 ++G++ +V G+VVDV F LP + AL+ V+ S + + LEVAQH+G+ +VRT+AM T+GL+RGQ VL+TG ITVPVG T GR+ NV+GE ++ G D+K + Y IHR+ P F ++ Q+ TGIKV+DLL PY +GGKIGLFGGAGVGK L+ ++ Sbjct: 5 AVGRIVRVTGSVVDVEFSRNNLPGVFNALKTRVNRSGKEIEITLEVAQHLGDDLVRTVAMQSTDGLIRGQEVLDTGGHITVPVGDATKGRVFNVVGEVLNSNGEDIKFDEYWSIHRKPPEFSLLESKTQLFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMI 172 HSP 2 Score: 63.1586 bits (152), Expect = 2.913e-51 Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLI E+I VA+ HGG SVFAGVGERT EGNDL R+M GV + Sbjct: 164 KTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIREMQDAGVFD 209
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CAMHC (ATP synthase subunit beta OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=atpD PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.913e-51 Identity = 87/164 (53.05%), Postives = 110/164 (67.07%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDH----SVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G + QV+G VVDV F + LP I A+EV RLVLEVA H+G+ VRTIAMD ++GL RG G+PI+VPVG+ LGRI NV G+ IDE E IHR+ P+F +Q+T+ +I TGIKVVDLLAPY +GGK+GLFGGAGVGK ++ L+ Sbjct: 3 GIISQVMGPVVDVDFKDYLPKINEAIEVKYDVEGIQKRLVLEVAAHLGDNKVRTIAMDMSDGLRRGLEAEALGAPISVPVGKKVLGRIFNVTGDLIDEGEPEDFETRWSIHRDPPSFEDQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELI 166 HSP 2 Score: 68.1662 bits (165), Expect = 2.913e-51 Identity = 32/46 (69.57%), Postives = 39/46 (84.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV+IMELI+NVA H G+SVFAGVGERT EGNDLY +M + GV++ Sbjct: 158 KTVIIMELIHNVAFKHNGYSVFAGVGERTREGNDLYNEMKESGVLD 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_HAEDU (ATP synthase subunit beta OS=Haemophilus ducreyi GN=atpD PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.914e-51 Identity = 85/161 (52.80%), Postives = 114/161 (70.81%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAV+DV F + +P + AL+V L LEV Q +G G+VR IA+ ++GL RG +V NTG+PI VPVG TLGRIMNV+GEPIDEKG + E IHR AP++ EQ+ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVIDVEFPQDAVPKVYDALKVESG---LTLEVQQQLGGGLVRCIALGTSDGLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGEEARWDIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELI 161 HSP 2 Score: 59.6918 bits (143), Expect = 2.914e-51 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 153 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 198
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ACTPJ (ATP synthase subunit beta OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=atpD PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.914e-51 Identity = 85/161 (52.80%), Postives = 114/161 (70.81%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAV+DV F + +P + AL+V L LEV Q +G G+VR IA+ ++GL RG +V NTG+PI VPVG TLGRIMNV+GEPIDEKG + E IHR AP++ EQ+ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVIDVEFPQDAVPKVYDALKVESG---LTLEVQQQLGGGLVRCIALGTSDGLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGEEARWDIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELI 161 HSP 2 Score: 59.6918 bits (143), Expect = 2.914e-51 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 153 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 198
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ACTP7 (ATP synthase subunit beta OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=atpD PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.914e-51 Identity = 85/161 (52.80%), Postives = 114/161 (70.81%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAV+DV F + +P + AL+V L LEV Q +G G+VR IA+ ++GL RG +V NTG+PI VPVG TLGRIMNV+GEPIDEKG + E IHR AP++ EQ+ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVIDVEFPQDAVPKVYDALKVESG---LTLEVQQQLGGGLVRCIALGTSDGLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGEEARWDIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELI 161 HSP 2 Score: 59.6918 bits (143), Expect = 2.914e-51 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 153 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 198
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ACTP2 (ATP synthase subunit beta OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=atpD PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.914e-51 Identity = 85/161 (52.80%), Postives = 114/161 (70.81%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAV+DV F + +P + AL+V L LEV Q +G G+VR IA+ ++GL RG +V NTG+PI VPVG TLGRIMNV+GEPIDEKG + E IHR AP++ EQ+ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVIDVEFPQDAVPKVYDALKVESG---LTLEVQQQLGGGLVRCIALGTSDGLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGEEARWDIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELI 161 HSP 2 Score: 59.6918 bits (143), Expect = 2.914e-51 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 153 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 198
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PSEPK (ATP synthase subunit beta OS=Pseudomonas putida (strain KT2440) GN=atpD PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.914e-51 Identity = 85/163 (52.15%), Postives = 113/163 (69.33%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGL-PPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F + P + AL+V LEV Q +G+GVVRTIAM TEGL RG V++TG+ I+VPVG+ TLGRIM+V+G PIDE G + E IH+ AP+F +QA +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SSGRIVQIIGAVIDVEFPRDVVPSVYNALKV--QGAETTLEVQQQLGDGVVRTIAMGSTEGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERRGIHQPAPSFADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 60.4622 bits (145), Expect = 2.914e-51 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 154 KTVNMMELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PSEPG (ATP synthase subunit beta OS=Pseudomonas putida (strain GB-1) GN=atpD PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.914e-51 Identity = 85/163 (52.15%), Postives = 113/163 (69.33%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGL-PPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F + P + AL+V LEV Q +G+GVVRTIAM TEGL RG V++TG+ I+VPVG+ TLGRIM+V+G PIDE G + E IH+ AP+F +QA +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SSGRIVQIIGAVIDVEFPRDVVPSVYNALKV--QGAETTLEVQQQLGDGVVRTIAMGSTEGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERRGIHQPAPSFADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 60.4622 bits (145), Expect = 2.914e-51 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 154 KTVNMMELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PSEP1 (ATP synthase subunit beta OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=atpD PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.914e-51 Identity = 85/163 (52.15%), Postives = 113/163 (69.33%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGL-PPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F + P + AL+V LEV Q +G+GVVRTIAM TEGL RG V++TG+ I+VPVG+ TLGRIM+V+G PIDE G + E IH+ AP+F +QA +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SSGRIVQIIGAVIDVEFPRDVVPSVYNALKV--QGAETTLEVQQQLGDGVVRTIAMGSTEGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERRGIHQPAPSFADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 60.4622 bits (145), Expect = 2.914e-51 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 154 KTVNMMELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |