DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LACSS (ATP synthase subunit beta OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=atpD PE=3 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 3.797e-51 Identity = 91/166 (54.82%), Postives = 111/166 (66.87%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF--DEGLPPILTALEV-VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLP-IHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S+G+V QVIG VVDV F D LP I AL V + +VLEVA +G+GV+RTI+M+ T+GL RG V + G I VPVG+ TLGR+ NV+GE ID + + IHR AP F E T +IL TGIKV+DLLAPY RGGKIGLFGGAGVGK L+ L+ Sbjct: 2 SMGKVVQVIGPVVDVEFSLDTDLPDINNALTVDKGNDETVVLEVALELGDGVMRTISMESTDGLRRGMPVEDAGRAINVPVGKETLGRVFNVLGETIDGGEEFPADFRRDSIHRSAPKFEELNTSSEILETGIKVIDLLAPYVRGGKIGLFGGAGVGKTVLIQELI 167 HSP 2 Score: 68.1662 bits (165), Expect = 3.797e-51 Identity = 56/143 (39.16%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ HGG SVF GVGERT EGNDLY +M + GV+ G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 159 KTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLEKTAMVFGQMNESPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGQLQER 286
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PEDPA (ATP synthase subunit beta OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=atpD PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 4.950e-51 Identity = 96/170 (56.47%), Postives = 118/170 (69.41%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF--DEGLPPILTALEV--VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID---EKG-DLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G+V QVIG V+DV F DE LP I AL++ D +V LV EV +G+GVVRTIAMDGT+GL RG V +TG I VPVG+ TLGR+ NV+G+ ID E G D+K + PIHR+ P + E ++L TGIKV+DLLAPY RGGKIGLFGGAGVGK L+ L+ Sbjct: 2 STGKVVQVIGPVIDVEFPLDEELPTINNALKIKKADGTV-LVSEVTLELGDGVVRTIAMDGTDGLQRGLDVEDTGDSIKVPVGKETLGRVFNVLGDTIDGGKELGPDIKRD---PIHRDPPDYDELNPSTEVLETGIKVIDLLAPYIRGGKIGLFGGAGVGKTVLIQELI 167 HSP 2 Score: 64.6994 bits (156), Expect = 4.950e-51 Identity = 55/143 (38.46%), Postives = 69/143 (48.25%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI-NLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELI+N+A+ H G SVF GVGERT EGNDLY +M GV+ G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 159 KTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKGSGVLERTAMVYGQMNEPPGARMR-----VALT------GLTIAEHFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATEMGQLQER 286
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_AERS4 (ATP synthase subunit beta OS=Aeromonas salmonicida (strain A449) GN=atpD PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.951e-51 Identity = 85/165 (51.52%), Postives = 112/165 (67.88%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVR--LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G + Q+IGAVVD+ F + +P + A++VV LVLEV Q +G GVVR I M ++GL RG V+N+G I VPVG TLGRIMNV+GEPIDEKG + E IHR AP++ +Q+ +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SNGFIVQIIGAVVDIEFPQDAVPQVYDAVKVVSEGQGQGLVLEVQQQIGGGVVRCITMGSSDGLRRGLEVMNSGKSIQVPVGVSTLGRIMNVLGEPIDEKGPIGEEERWSIHRAAPSYEDQSNSNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 166 HSP 2 Score: 62.7734 bits (151), Expect = 4.951e-51 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +MM+ V++ Sbjct: 158 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMESNVLD 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_PSEMY (ATP synthase subunit beta OS=Pseudomonas mendocina (strain ymp) GN=atpD PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 4.951e-51 Identity = 86/163 (52.76%), Postives = 112/163 (68.71%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F + +P + AL+V LEV Q +G+GVVRTIAM TEGL RG V +TG I+VPVG+ TLGRIM+V+G PIDE G + E IHR AP++ EQA +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SSGRIVQIIGAVIDVEFPRDQVPNVYEALKV--QGAETTLEVQQQLGDGVVRTIAMGSTEGLKRGLDVNSTGKAISVPVGKATLGRIMDVLGNPIDEAGPIGEEEQWEIHRAAPSYAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 59.6918 bits (143), Expect = 4.951e-51 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 154 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_HAEIN (ATP synthase subunit beta OS=Haemophilus influenzae GN=atpD PE=3 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 4.951e-51 Identity = 85/163 (52.15%), Postives = 114/163 (69.94%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F + +P + AL+V L LEV Q +G GVVR IA+ ++GL RG +V NT +PI VPVG TLGRIMNV+GEPIDE+G + E IHR AP++ EQ+ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SAGKIVQIIGAVIDVEFPQDAVPKVYDALKVESG---LTLEVQQQLGGGVVRCIALGTSDGLKRGLKVENTNNPIQVPVGTKTLGRIMNVLGEPIDEQGAIGEEERWAIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELI 161 HSP 2 Score: 59.6918 bits (143), Expect = 4.951e-51 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 153 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 198
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_HAEIE (ATP synthase subunit beta OS=Haemophilus influenzae (strain PittEE) GN=atpD PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 4.951e-51 Identity = 85/163 (52.15%), Postives = 114/163 (69.94%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F + +P + AL+V L LEV Q +G GVVR IA+ ++GL RG +V NT +PI VPVG TLGRIMNV+GEPIDE+G + E IHR AP++ EQ+ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SAGKIVQIIGAVIDVEFPQDAVPKVYDALKVESG---LTLEVQQQLGGGVVRCIALGTSDGLKRGLKVENTNNPIQVPVGTKTLGRIMNVLGEPIDEQGAIGEEERWAIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELI 161 HSP 2 Score: 59.6918 bits (143), Expect = 4.951e-51 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 153 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 198
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_HAEI8 (ATP synthase subunit beta OS=Haemophilus influenzae (strain 86-028NP) GN=atpD PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 4.951e-51 Identity = 85/163 (52.15%), Postives = 114/163 (69.94%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F + +P + AL+V L LEV Q +G GVVR IA+ ++GL RG +V NT +PI VPVG TLGRIMNV+GEPIDE+G + E IHR AP++ EQ+ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SAGKIVQIIGAVIDVEFPQDAVPKVYDALKVESG---LTLEVQQQLGGGVVRCIALGTSDGLKRGLKVENTNNPIQVPVGTKTLGRIMNVLGEPIDEQGAIGEEERWAIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELI 161 HSP 2 Score: 59.6918 bits (143), Expect = 4.951e-51 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 153 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 198
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_AERHH (ATP synthase subunit beta OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=atpD PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.453e-51 Identity = 85/165 (51.52%), Postives = 112/165 (67.88%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVR--LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G + Q+IGAVVD+ F + +P + AL+VV LVLEV Q +G GVVR I M ++GL RG V+N+G I VPVG TLGRIMNV+G+PIDEKG + E IHR AP++ +Q+ +L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SNGFIVQIIGAVVDIEFPQDAVPQVYDALKVVSEGQGQGLVLEVQQQIGGGVVRCITMGSSDGLRRGLEVVNSGKSIQVPVGVSTLGRIMNVLGDPIDEKGPIGEEERWSIHRAAPSYEDQSNSNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 166 HSP 2 Score: 62.7734 bits (151), Expect = 6.453e-51 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +MM+ V++ Sbjct: 158 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMESNVLD 203
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_GEOMG (ATP synthase subunit beta OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=atpD PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 7.010e-51 Identity = 105/173 (60.69%), Postives = 127/173 (73.41%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 + G++ QVIGAV+DV F+ G LPPI AL V D LVLEVAQH+GE VRTIAMD T+GLVRGQ L+TG I+VPVGR TLGRI+NVIGEP+DE G + E IHRE+P+FV+Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGK L+ L+ + + Sbjct: 4 NFGRISQVIGAVIDVEFEPGKLPPIYNALRVTNPAIDDKEYNLVLEVAQHLGENSVRTIAMDSTDGLVRGQAALDTGKQISVPVGRKTLGRILNVIGEPVDEMGPVNAEKEYGIHRESPSFVDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAK 176 HSP 2 Score: 76.6406 bits (187), Expect = 3.401e-13 Identity = 60/143 (41.96%), Postives = 76/143 (53.15%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGE-QQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINN+AK HGGFSVFAGVGERT EGNDL+ +M + GV++ G+ P ++A+ VAL+ L + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 163 KTVLIMELINNIAKQHGGFSVFAGVGERTREGNDLWMEMKESGVLDKAALVYGQMNEPPGARAR-----VALS------ALSIAEYFRDEEG-QNVLLFIDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATEMGELQER 290
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_IDILO (ATP synthase subunit beta OS=Idiomarina loihiensis GN=atpD PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.411e-51 Identity = 85/164 (51.83%), Postives = 114/164 (69.51%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVR-LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G+V Q+IGAVVD+ F + +P + AL+V + + LVLEV Q +G G+VR IAM T+GL RG NTG I VPVG+ TLGRIM+V+G PIDE G + E + IHR AP++ EQ+ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SQGKVVQIIGAVVDLEFPQDAVPKVYDALKVTEGGLEGLVLEVQQQLGGGIVRAIAMGTTDGLRRGITAKNTGESIMVPVGKKTLGRIMDVLGNPIDEAGPIGEEEKMSIHRAAPSYEEQSNTNELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELI 165 HSP 2 Score: 59.3066 bits (142), Expect = 8.411e-51 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 157 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLD 202 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |