DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_WIGBR (ATP synthase subunit beta OS=Wigglesworthia glossinidia brevipalpis GN=atpD PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 8.411e-51 Identity = 77/161 (47.83%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IG V+DV+F+ +P I ALE+ + +L++EV Q +G+G+VR I M ++GL RG +V N I VPVG+ TLGRIMNV+G+PID KG + + Y PIH ++P++ E ++ ++L TGIK++DL+ P+ +GGKIGLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGPVIDVKFEISFIPKINFALEIKIKNKKLIMEVMQQIGDGIVRCILMGSSDGLKRGLKVFNLNKGIEVPVGKPTLGRIMNVLGDPIDRKGKILSSEYRPIHNKSPSYNEISSSDELLETGIKIIDLICPFAKGGKIGLFGGAGVGKTVNMMELI 164 HSP 2 Score: 60.4622 bits (145), Expect = 8.411e-51 Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVF+GVGERT EGND Y +M+ VI+ Sbjct: 156 KTVNMMELIRNIAIEHSGYSVFSGVGERTREGNDFYNEMISSNVID 201
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_DESVM (ATP synthase subunit beta OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=atpD PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 1.196e-50 Identity = 101/172 (58.72%), Postives = 131/172 (76.16%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVD----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 +IG++ QVIGAVVDV F G LP IL+AL++ + + +LV EVAQH+G+ VVRTIAMD TEGLVRG ++TG PI VPVG+ +LGRIMNV+G P+DE G +KT+ YLPIHR AP F EQ T+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGK +L ++ + + Sbjct: 4 NIGKIVQVIGAVVDVEFPSGNLPNILSALDIKNPNNSDAPQLVCEVAQHLGDNVVRTIAMDATEGLVRGMEAVDTGKPIMVPVGKASLGRIMNVVGRPVDEMGPIKTDKYLPIHRPAPEFTEQNTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAK 175 HSP 2 Score: 71.633 bits (174), Expect = 1.094e-11 Identity = 40/72 (55.56%), Postives = 47/72 (65.28%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALA 955 KTV++ME+INN+AK HGG SVFAGVGERT EGNDLY +M GV+ Q P A+ R L ALA Sbjct: 162 KTVILMEMINNIAKQHGGISVFAGVGERTREGNDLYHEMKDAGVLEKAALIYGQMNEP-PGARARVALTALA 232
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_FRASN (ATP synthase subunit beta OS=Frankia sp. (strain EAN1pec) GN=atpD PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.429e-50 Identity = 89/167 (53.29%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRF-DEGLPPILTALEV---VD-HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID-EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG+V +VIG VVDV F + LP I TAL V +D + L LEVAQH+G+ +R I+M T+GLVRG V +TG+PI+VPVG T G + NV+G P+D +K D +T Y PIHR APAF + ++ ++ TGIKV+DLLAPY RGGKIGL GGAGVGK ++ ++ Sbjct: 18 IGRVARVIGPVVDVEFAPDELPEIYTALHVDRTIDGETAVLTLEVAQHIGDNTIRAISMQQTDGLVRGAPVRDTGAPISVPVGNATKGHVFNVLGNPLDVDKVDAET--YWPIHRSAPAFDQLESKTEMFTTGIKVIDLLAPYVRGGKIGLMGGAGVGKTVIIQEMI 182 HSP 2 Score: 61.2326 bits (147), Expect = 1.429e-50 Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTV+I E+I VAK GG SVFAGVGERT EGNDL+ +M + GVI Sbjct: 174 KTVIIQEMIRRVAKEFGGVSVFAGVGERTREGNDLFLEMTEAGVI 218
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_SYNWW (ATP synthase subunit beta OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=atpD PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.429e-50 Identity = 81/171 (47.37%), Postives = 110/171 (64.33%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS----------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V QVIGAVVD+RF G LP ++ A+ + + ++LE Q +G VVR +A+ T+G+ RG + +NTG+ I +PVG LGRI+NV+G+P+DE G + Y IHR+ PA VEQ Q L TGIKV DL+ PY +GGKIGLFGGAGVGK ++ L+ Sbjct: 7 GEVTQVIGAVVDIRFKPGELPDLMNAITIRSSEQDAGFTAVAEIDVMLEAMQLLGNDVVRCVALQPTDGISRGMKAVNTGAAIKIPVGEGCLGRILNVLGQPVDEAGPVNASDYWEIHRKPPALVEQLPATQQLETGIKVADLICPYAKGGKIGLFGGAGVGKTVIIQELI 177 HSP 2 Score: 65.0846 bits (157), Expect = 1.429e-50 Identity = 40/91 (43.96%), Postives = 52/91 (57.14%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTV+I ELI N+A HGG+SVF GVGERT EGNDL+ +M + GVI+ C L + P A R G G+ + + FR+ G Sbjct: 169 KTVIIQELIRNIAYEHGGYSVFTGVGERTREGNDLWGEMTESGVID---------KCALIFGQMNEPPGARLRVGLT-GMTVAEYFRDFSG 249
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_HAEIG (ATP synthase subunit beta OS=Haemophilus influenzae (strain PittGG) GN=atpD PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.429e-50 Identity = 84/163 (51.53%), Postives = 114/163 (69.94%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ Q+IGAV+DV F + +P + AL+V L LEV Q +G GVVR IA+ ++GL RG +V NT +PI VPVG TLGRI+NV+GEPIDE+G + E IHR AP++ EQ+ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 2 SAGKIVQIIGAVIDVEFPQDAVPKVYDALKVESG---LTLEVQQQLGGGVVRCIALGTSDGLKRGLKVENTNNPIQVPVGTKTLGRIVNVLGEPIDEQGAIGEEERWAIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELI 161 HSP 2 Score: 59.6918 bits (143), Expect = 1.429e-50 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 153 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 198
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_THICR (ATP synthase subunit beta OS=Thiomicrospira crunogena (strain XCL-2) GN=atpD PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.429e-50 Identity = 83/161 (51.55%), Postives = 112/161 (69.57%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IG V+DV F LP I AL+V + + L LEV Q +G+ VVR IAM ++GL RG V NTG I+VPVG+ TLGRI +V+G PID G +++E + IHR APAF E A Q++L TG+KV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 3 GKIVQIIGPVIDVEFKGADLPKIYDALKVDE--LDLTLEVQQQVGDNVVRAIAMGSSDGLKRGMAVSNTGEAISVPVGKPTLGRIFDVLGNPIDNAGPVESEEKMTIHRPAPAFDELAASQELLETGVKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELI 161 HSP 2 Score: 61.6178 bits (148), Expect = 1.429e-50 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M + GV++ Sbjct: 153 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYYEMEESGVLD 198
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_NITEU (ATP synthase subunit beta OS=Nitrosomonas europaea GN=atpD PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.863e-50 Identity = 85/161 (52.80%), Postives = 110/161 (68.32%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q IGAV+DV F G +P + AL V L LEV Q +G+GVVRTIA+ ++GL RG V NT I+VPVG TLGRIM+V+G PIDE G++ +PIHR APAF E + ++L TGIKV+DL+ P+ +GGKIGLFGGAGVGK + L+ Sbjct: 5 GKIVQCIGAVIDVEFTPGEIPKVYDAL--VMEGSELTLEVQQQLGDGVVRTIALGSSDGLRRGMMVTNTQKQISVPVGTKTLGRIMDVLGRPIDEMGEIGANSLMPIHRAAPAFDELSASTELLETGIKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELI 163 HSP 2 Score: 59.6918 bits (143), Expect = 1.863e-50 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 155 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 200
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_HAEPS (ATP synthase subunit beta OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=atpD PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.863e-50 Identity = 85/161 (52.80%), Postives = 111/161 (68.94%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAV+DV F + +P + AL+V L LEV Q +G GVVR IA+ ++GL RG +V NT I VPVG TLGRIMNV+GEPIDE G + E IHR AP++ EQA ++L TGIKV+DL+AP+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVIDVEFPQDAVPKVYDALKV---ETGLTLEVQQQLGGGVVRCIALGTSDGLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEEERWTIHRAAPSYEEQANSTELLETGIKVIDLIAPFAKGGKVGLFGGAGVGKTVNMMELI 161 HSP 2 Score: 59.6918 bits (143), Expect = 1.863e-50 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 153 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 198
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_GEOSM (ATP synthase subunit beta OS=Geobacter sp. (strain M21) GN=atpD PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 2.040e-50 Identity = 105/173 (60.69%), Postives = 126/173 (72.83%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 + G++ QVIGAV+DV F+ G LPPI AL V D LVLEVAQH+GE VRTIAMD T+GLVRGQ+V + G I+VPVG+ TLGRI+NVIGEP+DE G + E IHREAPAFV Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGK L+ L+ + + Sbjct: 4 NFGKISQVIGAVIDVEFEPGKLPPIYQALRVTNPAIDDQEFNLVLEVAQHLGENAVRTIAMDSTDGLVRGQQVKDMGKQISVPVGKKTLGRILNVIGEPVDEMGPIGNEKEYGIHREAPAFVNQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAK 176 HSP 2 Score: 75.8702 bits (185), Expect = 5.801e-13 Identity = 60/143 (41.96%), Postives = 76/143 (53.15%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGE-QQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINN+AK HGGFSVFAGVGERT EGNDL+ +M + GV++ G+ P ++A+ VAL+ L + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 163 KTVLIMELINNIAKQHGGFSVFAGVGERTREGNDLWMEMKESGVLDKAALVYGQMNEPPGARAR-----VALS------ALSIAEYFRDEEG-QDVLLFVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATEMGELQER 290
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CAUCR (ATP synthase subunit beta OS=Caulobacter crescentus GN=atpD PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 2.040e-50 Identity = 100/171 (58.48%), Postives = 128/171 (74.85%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 +G+ G++ Q+IGAVVD+ FD LP IL A+E V+ + RLV EVAQH+G+ VR IAMD TEGLVRGQ V +TG PI VPVG TLGRIMNVIGEPIDE+G ++++ IHR+AP+F EQ ++LVTGIKV+DL+ PY +GGKIGLFGGAGVGK + L+ + + Sbjct: 61 EGATGRLVQIIGAVVDIEFDGALPAILNAVETVNTATGQRLVFEVAQHLGQSTVRAIAMDATEGLVRGQPVRDTGEPIRVPVGPGTLGRIMNVIGEPIDEQGPIRSDISRTIHRDAPSFAEQTNTAEVLVTGIKVIDLMCPYTKGGKIGLFGGAGVGKTVTMQELINNIAK 231 HSP 2 Score: 74.3294 bits (181), Expect = 1.688e-12 Identity = 60/147 (40.82%), Postives = 75/147 (51.02%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGV-----INLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTV + ELINN+AKA+GG+SV AGVGERT EGNDLY +M++ V N G +G + C L + P A AR GL + + FR+ EG K F F F TQ + LG P VGY G+L R Sbjct: 218 KTVTMQELINNIAKAYGGYSVLAGVGERTREGNDLYHEMIESNVNVDPKANNGSTEGSR--CALVYGQMNEPPGARARVALT-GLSIAEYFRDEEG-KDVLLFVDNIFRF--TQAGAEVSALLGRIPS-AVGYQPTLATEMGNLQER 357 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |