DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LACDB (ATP synthase subunit beta OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=atpD PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.427e-50 Identity = 89/168 (52.98%), Postives = 117/168 (69.64%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEH-YLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV+F G LP I AL+V+ D S+ +LEV G+GV+R IAM+ T+GL RG +V +TGS I+VPVG TLGR+ NV+G+PID + +H IH+EAP + E T ++IL TGIKV+DLL PY RGGK+GLFGGAGVGK ++ L+ Sbjct: 2 SQGEIVQVIGPVVDVKFSIGKDLPDINNALKVIKSDDDSI--ILEVILEQGDGVLRCIAMESTDGLRRGMKVEDTGSSISVPVGPDTLGRVFNVLGQPIDGGPEFPADHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRGGKVGLFGGAGVGKTTIIQELI 167 HSP 2 Score: 62.3882 bits (150), Expect = 2.427e-50 Identity = 53/143 (37.06%), Postives = 69/143 (48.25%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KT +I ELI+N+A+ H G SVF GVGERT EGNDLY +M GV++ G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 159 KTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATEMGQLQER 286
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LACDA (ATP synthase subunit beta OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=atpD PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.427e-50 Identity = 89/168 (52.98%), Postives = 117/168 (69.64%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVV---DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEH-YLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 S G++ QVIG VVDV+F G LP I AL+V+ D S+ +LEV G+GV+R IAM+ T+GL RG +V +TGS I+VPVG TLGR+ NV+G+PID + +H IH+EAP + E T ++IL TGIKV+DLL PY RGGK+GLFGGAGVGK ++ L+ Sbjct: 2 SQGEIVQVIGLVVDVKFSIGKDLPDINNALKVIKSDDDSI--ILEVILEQGDGVLRCIAMESTDGLRRGMKVEDTGSSISVPVGPDTLGRVFNVLGQPIDGGPEFPADHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRGGKVGLFGGAGVGKTTIIQELI 167 HSP 2 Score: 62.3882 bits (150), Expect = 2.427e-50 Identity = 53/143 (37.06%), Postives = 69/143 (48.25%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQ-GEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KT +I ELI+N+A+ H G SVF GVGERT EGNDLY +M GV++ G+ P ++ + VAL GL + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 159 KTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKTAMVFGQMNEPPGARMR-----VALT------GLTIAEYFRDVEG-QDVLLFIDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATEMGQLQER 286
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BUCBP (ATP synthase subunit beta OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=atpD PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 2.428e-50 Identity = 85/166 (51.20%), Postives = 113/166 (68.07%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDE-GLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-----HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q+IGAVVDV F + +P I AL+V + L+LEV Q +G G+VRTIAM + GL RG V++ I VPVG TLGRI+NV+G+PID KG LK Y IHR+AP++ EQ T ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQIIGAVVDVEFSQQSVPKIFNALKVDNQGSILILEVQQQLGSGIVRTIAMGSSNGLKRGLLVVDLEHGIKVPVGTATLGRIVNVLGQPIDMKGPLKNHDNSDIEYWEIHRKAPSYSEQLTSYEVLETGIKVIDLICPFSKGGKVGLFGGAGVGKTVNMMELI 169 HSP 2 Score: 58.151 bits (139), Expect = 2.428e-50 Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVF GVGERT EGND Y +M V++ Sbjct: 161 KTVNMMELIRNIATEHSGYSVFTGVGERTREGNDFYHEMSDSRVLD 206
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_MYCGE (ATP synthase subunit beta OS=Mycoplasma genitalium GN=atpD PE=3 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 3.164e-50 Identity = 87/162 (53.70%), Postives = 101/162 (62.35%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+V QVIG VVDV F E LP + L V L LE Q +G+ +VR IA+ TEGL R +V N PI VPVG+ LGR+ NV+GEPID K L + L IHR PAF EQ I TGIKV+DLL PY RGGKIGLFGGAGVGK L+ L+ Sbjct: 10 GKVHQVIGPVVDVIFSESKQLPRVYDCLSVQLKKSELFLEATQLIGDDIVRCIALGPTEGLARNVKVTNYNHPIEVPVGKNVLGRMFNVLGEPIDGKEPLPKKPKLSIHRNPPAFDEQPNTVDIFETGIKVIDLLTPYVRGGKIGLFGGAGVGKTVLVQELI 171 HSP 2 Score: 68.5514 bits (166), Expect = 3.164e-50 Identity = 32/46 (69.57%), Postives = 39/46 (84.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVL+ ELI+N+AK H G SVFAGVGERT EGNDLY +M++ GVI+ Sbjct: 163 KTVLVQELIHNIAKEHSGLSVFAGVGERTREGNDLYYEMIQGGVID 208
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ROSCS (ATP synthase subunit beta OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=atpD PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.124e-50 Identity = 82/165 (49.70%), Postives = 115/165 (69.70%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEV-VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+ G V +IG V++ +F E P I ALE+ +++ RLV EV Q +G GVV+ +AM T+G+ RG + ++TG PI VPVG TLGR+ +V+G+PID +G ++T Y PIHR PA +Q+T QI TGIKV+DL+AP+ RGGK G+FGGAGVGK ++ L+ Sbjct: 3 GATGIVTDIIGVVINAKFPEHETPEIYNALEIRLENGKRLVAEVQQQLGGGVVKAVAMSSTDGMRRGVKAIDTGRPIAVPVGPGTLGRVFDVLGDPIDGEGPVQTTEYRPIHRPPPALEDQSTTAQIFETGIKVIDLIAPFTRGGKTGIFGGAGVGKTVIIQELI 167 HSP 2 Score: 55.8398 bits (133), Expect = 4.124e-50 Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKM 856 KTV+I ELI NVAK G+SVFAGVGER+ EGNDL +M Sbjct: 159 KTVIIQELIANVAKEQSGYSVFAGVGERSREGNDLIHEM 197
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_MARMM (ATP synthase subunit beta OS=Maricaulis maris (strain MCS10) GN=atpD PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 4.544e-50 Identity = 104/168 (61.90%), Postives = 121/168 (72.02%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQRL 785 S G++ Q+ GAVVDV FD LP IL ALE + L LEVAQH+GE VRTIAMD TEGL RG V +TG PI VPVG TLGRIM+V G+PIDE GD+ PIHR AP+F EQATE ++L TGIKVVDLL PY +GGKIGLFGGAGVGK L+ L+ + +L Sbjct: 4 SQGRIVQITGAVVDVEFDGTLPDILNALETTNDDKTLTLEVAQHLGENTVRTIAMDATEGLQRGTVVTDTGGPIMVPVGPGTLGRIMSVTGQPIDEAGDVPHTMKAPIHRPAPSFDEQATEAEVLPTGIKVVDLLCPYAKGGKIGLFGGAGVGKTVLIQELINNIAKL 171 HSP 2 Score: 74.3294 bits (181), Expect = 1.688e-12 Identity = 61/145 (42.07%), Postives = 73/145 (50.34%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQG---EQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLI ELINN+AK GG+SVFAGVGERT EGNDLY +M++ GV ++ E C L + P A AR GL + FR+ EG K F F F TQ + LG P VGY G+L R Sbjct: 157 KTVLIQELINNIAKLFGGYSVFAGVGERTREGNDLYWEMIESGVNKDPKEHDGSTEGSRCALVFGQMNEPPGARARVALS-GLAQAEYFRDEEG-KDVLFFVDNIFRF--TQAGSELSALLGRIPS-AVGYQPTLATDMGALQER 296
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_GEOBB (ATP synthase subunit beta OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=atpD PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 7.751e-50 Identity = 104/173 (60.12%), Postives = 125/173 (72.25%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 + G++ QVIGAV+DV F+ G LPPI AL V D LVLEVAQH+GE VRTIAMD T+GLVRGQ+V + G I+VPVG+ TLGRI+NVIGEP+DE G + E IHREAP FV Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGK L+ L+ + + Sbjct: 4 NFGKISQVIGAVIDVEFEPGKLPPIYQALRVTNPAIDDQEFNLVLEVAQHLGENAVRTIAMDSTDGLVRGQQVKDMGKQISVPVGKKTLGRILNVIGEPVDEMGPIGNEKEYGIHREAPLFVNQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAK 176 HSP 2 Score: 75.8702 bits (185), Expect = 5.801e-13 Identity = 60/143 (41.96%), Postives = 76/143 (53.15%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGE-QQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINN+AK HGGFSVFAGVGERT EGNDL+ +M + GV++ G+ P ++A+ VAL+ L + + FR+ EG + F F F TQ + LG P VGY G L R Sbjct: 163 KTVLIMELINNIAKQHGGFSVFAGVGERTREGNDLWMEMKESGVLDKAALVYGQMNEPPGARAR-----VALS------ALSIAEYFRDEEG-QDVLLFVDNIFRF--TQAGSEVSALLGRIPS-AVGYQPTLATEMGELQER 290
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ALKOO (ATP synthase subunit beta OS=Alkaliphilus oremlandii (strain OhILAs) GN=atpD PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 1.012e-49 Identity = 96/170 (56.47%), Postives = 127/170 (74.71%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 +G++G++ Q+IG V+D+RF E LP +L A+E+ ++V+EV+QH+G+ VR +AM T+GLVRG +TG PITVPVGR TLGRI NVIGEP+DEKG + E PIHR AP+F +QAT +IL TGIKVVDL+APY +GGKIGLFGGAGVGK L+ L+ + + Sbjct: 3 EGNVGKLVQIIGPVIDIRFSRENLPNLLNAIEIEGPDGKIVVEVSQHIGDDTVRCVAMKSTDGLVRGMEAKDTGGPITVPVGRATLGRIFNVIGEPVDEKGAVAAEAKAPIHRPAPSFEDQATSTEILETGIKVVDLIAPYLKGGKIGLFGGAGVGKTVLIMELINNIAK 172 HSP 2 Score: 76.6406 bits (187), Expect = 3.401e-13 Identity = 60/142 (42.25%), Postives = 73/142 (51.41%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTVLIMELINN+AK HGG SVF+GVGERT EGNDLY +M++ GVI+ L + P A R G GL + + FR+ EG + F F F TQ + LG P VGY G+L R Sbjct: 159 KTVLIMELINNIAKEHGGLSVFSGVGERTREGNDLYNEMIESGVID---------KTALVYGQMNEPPGARMRVGLT-GLTMAEHFRDEEG-QDVLLFIDNIFRF--TQAGSEVSALLGRMPS-AVGYQPTLATEMGALQER 286
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ROSS1 (ATP synthase subunit beta OS=Roseiflexus sp. (strain RS-1) GN=atpD PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.190e-49 Identity = 81/165 (49.09%), Postives = 114/165 (69.09%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEV-VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G+ G V +IG V++ +F E P I ALE+ +++ RLV EV Q +G GVV+ +AM T+G+ RG + ++TG PI VPVG TLGR+ +V+G+PID +G ++ Y PIHR PA +Q+T QI TGIKV+DL+AP+ RGGK G+FGGAGVGK ++ L+ Sbjct: 3 GATGVVTDIIGVVLNAKFPEDQTPEIYNALEIRLENGKRLVAEVQQQLGGGVVKAVAMSSTDGMRRGVKAIDTGRPIAVPVGPGTLGRVFDVLGDPIDGEGPVQATEYRPIHRPPPALEDQSTTAQIFETGIKVIDLIAPFTRGGKTGIFGGAGVGKTVVIQELI 167 HSP 2 Score: 56.6102 bits (135), Expect = 1.190e-49 Identity = 28/39 (71.79%), Postives = 31/39 (79.49%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKM 856 KTV+I ELI NVAK GFSVFAGVGER+ EGNDL +M Sbjct: 159 KTVVIQELIANVAKEQSGFSVFAGVGERSREGNDLIHEM 197
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ACIC1 (ATP synthase subunit beta OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=atpD PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.551e-49 Identity = 89/176 (50.57%), Postives = 116/176 (65.91%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFD-EGLPPILTALEV-VDHSVR-----------LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G +G+V +VIG VVDV F + LP I AL V VD + L LEVAQH+G+ +VR I++ T+GLVRG V +TG+PI+VPVG VT G + NV+G+ +D TE + PIHR APAF + + ++L TGIKV+DLL PY RGGKIGLFGGAGVGK L+ ++ Sbjct: 15 GGVGRVARVIGPVVDVEFAADELPEIYNALTVDVDFATASEQVEGETKRTLTLEVAQHIGDNMVRAISLQPTDGLVRGALVRDTGAPISVPVGDVTKGHVFNVLGQTLDVPRIEVTERW-PIHRPAPAFDQLEAKTEMLETGIKVIDLLTPYVRGGKIGLFGGAGVGKTVLIQEMI 189 HSP 2 Score: 64.3142 bits (155), Expect = 1.551e-49 Identity = 32/46 (69.57%), Postives = 37/46 (80.43%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLI E+I+ VAK GG SVFAGVGERT EGNDL+ +M + GVIN Sbjct: 181 KTVLIQEMIHRVAKNFGGVSVFAGVGERTREGNDLFLEMTESGVIN 226 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |