DY258338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB1_NITMU (ATP synthase subunit beta 1 OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=atpD1 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.552e-49 Identity = 86/161 (53.42%), Postives = 109/161 (67.70%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 G++ Q IGAVVDV F E +P + AL V L LEV Q +G+GVVRTIA+ +EGL RG V NTG I VPVG TLGRIM+V+G PIDE G + E IH++APAF E + ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGK + L+ Sbjct: 4 GKIVQCIGAVVDVEFAREEMPKVYDAL--VLEGSELTLEVQQQLGDGVVRTIALGSSEGLRRGMMVTNTGDQIRVPVGTKTLGRIMDVLGTPIDEMGPIGAEQNRSIHQKAPAFDELSASTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELI 162 HSP 2 Score: 59.6918 bits (143), Expect = 1.552e-49 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV +MELI N+A H G+SVFAGVGERT EGND Y +M V++ Sbjct: 154 KTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_FRAAA (ATP synthase subunit beta OS=Frankia alni (strain ACN14a) GN=atpD PE=3 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 2.022e-49 Identity = 88/167 (52.69%), Postives = 116/167 (69.46%), Query Frame = 3 Query: 285 IGQVCQVIGAVVDVRF-DEGLPPILTALEVV----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID-EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 IG+V +VIG VVDV F + LP I ALEV ++ L LEVAQH+G+ VR I+M T+GLVRG V +TG+PI+VPVG T G + NV+G P+D +K D +T IHR+APAF + ++ ++ TGIKV+DLLAPY RGGKIGLFGGAGVGK ++ ++ Sbjct: 18 IGRVARVIGPVVDVEFAPDELPEIYQALEVDRTIGGETLTLTLEVAQHIGDNTVRAISMQQTDGLVRGAVVRDTGAPISVPVGDATKGHVFNVLGTPLDVDKVDAETRW--SIHRQAPAFDQLESKTEMFTTGIKVIDLLAPYVRGGKIGLFGGAGVGKTVIIQEMI 182 HSP 2 Score: 61.2326 bits (147), Expect = 2.022e-49 Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTV+I E+I VAK GG SVFAGVGERT EGNDL+ +M + GVI Sbjct: 174 KTVIIQEMIRRVAKEFGGVSVFAGVGERTREGNDLFLEMTEAGVI 218
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_CAUSK (ATP synthase subunit beta OS=Caulobacter sp. (strain K31) GN=atpD PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 2.255e-49 Identity = 102/173 (58.96%), Postives = 125/173 (72.25%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 T + G++ QVIGAVVDV F LP IL ALE V+ + RLV EVAQH+G+ VR IAMD TEGLVRGQ V +TG I VPVG TLGRIMNVIGEPIDE+G +K++ + IHR+AP F EQ ++LVTGIKV+DL+ PY +GGKIGLFGGAGVGK + L+ + + Sbjct: 63 TIRAGTGKLVQVIGAVVDVEFTGELPAILNALETVNIATGQRLVFEVAQHLGQNTVRAIAMDATEGLVRGQEVRDTGQSIRVPVGPGTLGRIMNVIGEPIDEQGPIKSDIFRTIHRDAPTFAEQTNTAEVLVTGIKVIDLMCPYTKGGKIGLFGGAGVGKTVTMQELINNIAK 235 HSP 2 Score: 72.7886 bits (177), Expect = 4.911e-12 Identity = 61/147 (41.50%), Postives = 76/147 (51.70%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGV-----INLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165 KTV + ELINN+AKA+GG+SV AGVGERT EGNDLY +M++ V IN G +G + C L + P A AR GL + + FR+ EG K F F F TQ + LG P VGY G+L R Sbjct: 222 KTVTMQELINNIAKAYGGYSVLAGVGERTREGNDLYHEMIESNVNVDPKIN-GSTEGSR--CALVYGQMNEPPGARARVALT-GLSIAEYFRDEEG-KDVLLFVDNIFRF--TQAGAEVSALLGRIPS-AVGYQPTLATEMGNLQER 360
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_ACICJ (ATP synthase subunit beta OS=Acidiphilium cryptum (strain JF-5) GN=atpD PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 2.945e-49 Identity = 103/169 (60.95%), Postives = 123/169 (72.78%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 K G++ Q++G VVDV+F+ LP IL ALE RLVLEVAQ +GE VR IAMD T+GL RG V +TG I VPVG TLGRI+NVIGEPIDE+G + T PIHR+AP+F EQAT +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK L+ L+ + + Sbjct: 3 KNVTGRITQIMGPVVDVQFEGELPYILNALETRVGDRRLVLEVAQEIGERTVRCIAMDSTDGLARGDEVRDTGEAIAVPVGPETLGRILNVIGEPIDERGPIPTTRTAPIHRQAPSFDEQATSAEILVTGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAK 171 HSP 2 Score: 86.6557 bits (213), Expect = 3.287e-16 Identity = 50/91 (54.95%), Postives = 57/91 (62.64%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012 KTVLI ELINN+AK HGG SVFAGVGERT EGNDLY +M+ GVI LGE E L + P A R G GL + + FR+ EG Sbjct: 158 KTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEMIDAGVIKLGEGTTEGSKVALVYGQMNEPPGARMRVGLS-GLTMAEYFRDEEG 247
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_GEOLS (ATP synthase subunit beta OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=atpD PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 3.847e-49 Identity = 104/173 (60.12%), Postives = 126/173 (72.83%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 +IG++ QVIGAV+DV F+ G LP I AL V + ++ LVLEVAQH+GE VRTIAMD T+GL RGQ V++TG I PVGR TLGRIMNVIGEP+DE G + E IHREAPAF +Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGK L+ L+ + + Sbjct: 4 NIGKISQVIGAVIDVEFEPGKLPEIYHALRVTNPAIDDRENNLVLEVAQHLGENSVRTIAMDSTDGLKRGQAVIDTGKQICAPVGRKTLGRIMNVIGEPVDEMGPIGNEKEYGIHREAPAFEDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAK 176 HSP 2 Score: 73.559 bits (179), Expect = 2.879e-12 Identity = 34/46 (73.91%), Postives = 41/46 (89.13%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTVLIMELINN+AK HGG+SVFAGVGERT EGNDL+ +M + GV++ Sbjct: 163 KTVLIMELINNIAKQHGGYSVFAGVGERTREGNDLWMEMKESGVLD 208
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_FUSNN (ATP synthase subunit beta OS=Fusobacterium nucleatum subsp. nucleatum GN=atpD PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 3.847e-49 Identity = 95/165 (57.58%), Postives = 120/165 (72.73%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 G + Q+I AVVD+ F + LP I AL+V LVLEV QH+G VVRT+AMD T+GL RG V++TG PIT+PVG+ LGRI+NV+GEP+D +G L E +LPIHREAP F + TE +I TGIKV+DLLAPY +GGKIGLFGGAGVGK L+ L+ + + Sbjct: 4 GTITQIISAVVDIAFKDELPAIYNALKVKLEDKELVLEVEQHLGNNVVRTVAMDSTDGLKRGMEVIDTGKPITIPVGKAVLGRILNVLGEPVDNQGPLNAETFLPIHREAPEFDDLETETEIFETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAK 168 HSP 2 Score: 72.4034 bits (176), Expect = 6.414e-12 Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLIMELINN+AK HGG SVFAGVGERT EG DLY +M + GVI Sbjct: 155 KTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYGEMTESGVI 199
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_DESDA (ATP synthase subunit beta OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=atpD PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 5.024e-49 Identity = 98/172 (56.98%), Postives = 128/172 (74.42%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVD----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 +IG++ QVIGAVVDV F +G LP I TALE+ + + L+ EVAQH+G+ VVRTIAMD TEGLVRG ++TG PI VPVG+ ++GRI+NVIG P+DE G + E Y PIHR APAF +Q T+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGK +L ++ + + Sbjct: 4 NIGKIVQVIGAVVDVEFSDGNLPNIFTALEIKNPNNTDAPELICEVAQHLGDNVVRTIAMDATEGLVRGMDAVDTGQPIMVPVGKPSVGRILNVIGRPVDEMGPINAEKYYPIHRPAPAFTDQNTKVELLETGIKVVDLLVPFPKGGKMGLFGGAGVGKTVILMEMINNIAK 175 HSP 2 Score: 70.0922 bits (170), Expect = 3.183e-11 Identity = 39/72 (54.17%), Postives = 47/72 (65.28%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALA 955 KTV++ME+INN+AK HGG SVFAGVGERT EGNDLY ++ GV+ Q P A+ R L ALA Sbjct: 162 KTVILMEMINNIAKQHGGSSVFAGVGERTREGNDLYHELKDAGVLERATLVYGQMNEP-PGARARVALTALA 232
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_LAWIP (ATP synthase subunit beta OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=atpD PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 6.561e-49 Identity = 99/172 (57.56%), Postives = 130/172 (75.58%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVD----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 +IG++ QVIGAVVDV F G LPPILTALE+ + + +L+ EVAQH+G+ +VRTIAMD TEGL RG VL+TG PI PVG+ +LGRIMNV+G+PID G + T+ YLPIHR+ P+F++Q T + L TGIKV+DLL P+ +GGK+GLFGGAGVGK +L ++ + R Sbjct: 4 NIGKIVQVIGAVVDVSFPNGKLPPILTALEIHNPNSIDAPKLICEVAQHLGDDIVRTIAMDATEGLKRGMDVLDTGHPIMAPVGKASLGRIMNVVGQPIDGLGVIDTKTYLPIHRKPPSFLDQNTSVEPLETGIKVIDLLVPFPKGGKMGLFGGAGVGKTVILMEMINNIAR 175 HSP 2 Score: 70.8626 bits (172), Expect = 1.866e-11 Identity = 31/45 (68.89%), Postives = 39/45 (86.67%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTV++ME+INN+A+ HGG SVFAGVGERT EGNDLY +M + GV+ Sbjct: 162 KTVILMEMINNIARQHGGISVFAGVGERTREGNDLYHEMKEAGVL 206
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_BLOFL (ATP synthase subunit beta OS=Blochmannia floridanus GN=atpD PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.685e-48 Identity = 86/168 (51.19%), Postives = 113/168 (67.26%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEV-VD----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767 SIG++ QVIGAV+DV F +P + ALEV +D H V L+LEV Q +G +VR IAM T GL RG V N I VPVG+ TLGR+M+V+G PID KG + + IHR AP + E ++ Q++L+TGIKV+DL+ P+ +GGKIGLFGGAGVGK + L+ Sbjct: 2 SIGKIIQVIGAVIDVEFQYNDIPNLYHALEVNIDNGNSHQV-LILEVVQQLGRSIVRCIAMGSTNGLKRGLDVTNLKHGIQVPVGKETLGRVMDVLGNPIDMKGPINSIEKWSIHRSAPLYEELSSNQELLITGIKVIDLMCPFIKGGKIGLFGGAGVGKTVNIMELI 168 HSP 2 Score: 59.6918 bits (143), Expect = 1.685e-48 Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVIN 877 KTV IMELI N+A H G+SVF GVGER EGND Y +M+ G+++ Sbjct: 160 KTVNIMELIRNIAIEHAGYSVFVGVGERIREGNDFYHEMIHSGILD 205
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB2_PELPD (ATP synthase subunit beta 2 OS=Pelobacter propionicus (strain DSM 2379) GN=atpD2 PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 2.493e-48 Identity = 103/171 (60.23%), Postives = 124/171 (72.51%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVR-----LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQR 782 G++ QVIGAVVDV F+ G LP I AL V + ++ LVLEVAQH+GE VRTIAMD T+GL RGQ VL+TG I PVG+ TLGRI+NVIGEP+DE G + + PIHREAP F +Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGK L+ L+ + R Sbjct: 6 GKITQVIGAVVDVEFEPGKLPEIYHALRVTNPAINDSENNLVLEVAQHLGENSVRTIAMDSTDGLKRGQAVLDTGKQICAPVGKKTLGRIINVIGEPVDEMGPIGNDKENPIHREAPPFEDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAR 176 HSP 2 Score: 73.1738 bits (178), Expect = 3.760e-12 Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 2 Query: 740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVI 874 KTVLIMELINN+A+ HGGFSVFAGVGERT EGNDL+ +M + GV+ Sbjct: 163 KTVLIMELINNIARQHGGFSVFAGVGERTREGNDLWMEMKETGVL 207 The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bpback to top |