DY258355

Overview
NameDY258355
Unique NameDY258355
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1332
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.988e-12
Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 1
Query:  157 PCT--WSNVIC-----DNSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            PC   W+ VIC     D   +V  + L +MN +G L P++G+L  L+ L    N +TG+IP ELGNL+ L  L L  N+L G +P  LG+L  L  L
Sbjct:   58 PCASNWTGVICIPDPSDGFLHVKELRLLNMNLTGQLAPELGLLSNLTILNFMWNDLTGQIPPELGNLTHLIFLLLSGNQLTGSLPQELGSLSNLLIL 154          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: FLS2_ARATH (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.988e-12
Identity = 51/150 (34.00%), Postives = 74/150 (49.33%), Query Frame = 1
Query:  196 NVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL*VIPSIKISLLIYMVFLHLFS*SGTKSLDLFLIVEPGL*VKTILVGPSLIHSQLFQALISIQLDSNNLSGQIP 645
            N+  + LS    +G +P   G L  L +L L  N + G+IP E+GN SSL  L+L +N+L GKIP  LGNL +LQ L +  +   S +   +F             L  +   GL  +  LVGP        ++L  + L SNN +G+ P
Sbjct:  217 NLTDLDLSGNQLTGKIPRDFGNLLNLQSLVLTENLLEGDIPAEIGNCSSLVQLELYDNQLTGKIPAELGNLVQLQALRIYKNKLTSSIPSSLF------------RLTQLTHLGL-SENHLVGPISEEIGFLESLEVLTLHSNNFTGEFP 353          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.174e-11
Identity = 63/211 (29.86%), Postives = 94/211 (44.55%), Query Frame = 1
Query:  166 WSNVICDNSNNVAS---VTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL*VIPSIKISLLIYMVFLHLFS*SGTKSLDLFLIVEPGL*VKTILVGPSLIHSQL----------FQALISIQLDSNNLSGQIPVPLLPIPKYNFPGKQPEPGKNSSHIPANLLDKISGSSK 759
            +S V+ +  +++ S   V LSS +FSG +P   G LR L +L+L  N I+G IP E+GN S+L  L+L +NRL+G IP  L  L +L+ L                            +L   + P +   + L   SL H+ L             L  + L  NNL+G+IP  L  I   N              IPA+L  +I+ +S+
Sbjct:  536 FSGVVPEGFSSLVSLRYVNLSSNSFSGEIPQTFGFLRLLVSLSLSDNHISGSIPPEIGNCSALEVLELRSNRLMGHIPADLSRLPRLKVL-----------------------DLGQNNLSGEIPPEISQSSSLNSLSLDHNHLSGVIPGSFSGLSNLTKMDLSVNNLTGEIPASLALISS-NLVYFNVSSNNLKGEIPASLGSRINNTSE 722          

HSP 2 Score: 70.4774 bits (171), Expect = 2.615e-11
Identity = 64/204 (31.37%), Postives = 95/204 (46.57%), Query Frame = 1
Query:  196 NVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQ--------FL*VIPSIKISLLIYMVFLHLFS*SGTKSLD-----LFLIVEPGL*VKTI--LVGPSLIHSQLFQALISIQLDSNNLSGQIPVPLLPIPKY--------NFPGKQPEPGKNSSHIPANLLD 738
            +++ + LS   FSG +P  I  L  LS L L GNG +GEIP  +GNL  LT+LDL    + G++P  L  L  +Q        F  V+P    S L+ + +++L S S +  +      L L+V   L    I   + P + +     AL  ++L SN L G IP  L  +P+         N  G+ P     SS + +  LD
Sbjct:  453 SLSELDLSGNRFSGAVPVSISNLSNLSFLNLSGNGFSGEIPASVGNLFKLTALDLSKQNMSGEVPVELSGLPNVQVIALQGNNFSGVVPE-GFSSLVSLRYVNLSSNSFSGEIPQTFGFLRLLVSLSLSDNHISGSIPPEIGNC---SALEVLELRSNRLMGHIPADLSRLPRLKVLDLGQNNLSGEIPPEISQSSSLNSLSLD 652          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.174e-11
Identity = 41/96 (42.71%), Postives = 51/96 (53.12%), Query Frame = 1
Query:  157 PCTWSNVICD--------NSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQ 420
            PC W  V C         NS  V S+ LSSMN SG + P IG L  L  L L  N +TG+IP E+GN S L  + L NN+  G IP  +  L +L+
Sbjct:   65 PCNWIGVNCSSQGSSSSSNSLVVTSLDLSSMNLSGIVSPSIGGLVNLVYLNLAYNALTGDIPREIGNCSKLEVMFLNNNQFGGSIPVEINKLSQLR 160          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.174e-11
Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 1
Query:  157 PCTWSNVICDNSNN--VASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            PC W  + C +S+N  V  + + S+  +   PP I    +L  L +    +TG I  E+G+ S L  +DL +N LVG+IP SLG LK LQ L
Sbjct:   68 PCQWPYITCSSSDNKLVTEINVVSVQLALPFPPNISSFTSLQKLVISNTNLTGAISSEIGDCSELIVIDLSSNSLVGEIPSSLGKLKNLQEL 159          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.533e-11
Identity = 43/114 (37.72%), Postives = 52/114 (45.61%), Query Frame = 1
Query:  157 PCTWSNVICDNSNNVASVT------------------------LSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            PC+W  + C   N V SV+                        LSS N SG +PP  G L  L  L L  N ++G IP ELG LS+L  L L  N+L G IP  + NL  LQ L
Sbjct:   55 PCSWYGITCSADNRVISVSIPDTFLNLSSIPDLSSLSSLQFLNLSSTNLSGPIPPSFGKLTHLRLLDLSSNSLSGPIPSELGRLSTLQFLILNANKLSGSIPSQISNLFALQVL 168          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 64.6994 bits (156), Expect = 1.707e-11
Identity = 34/71 (47.89%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  208 VTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQ 420
            + LS    +G++PP+ GVL  L  + L GN +TG IP+E GN+++LTSL LE N+L G++P  LGNL  +Q
Sbjct:   92 IDLSRNYLNGSIPPEWGVL-PLVNIWLLGNRLTGPIPKEFGNITTLTSLVLEANQLSGELPLELGNLPNIQ 161          

HSP 2 Score: 25.0238 bits (53), Expect = 1.707e-11
Identity = 13/23 (56.52%), Postives = 15/23 (65.22%), Query Frame = 3
Query:  540 LSQNNFSGTIPDS---LTTLSSF 599
            LS NNF+G IP +   LTTL  F
Sbjct:  165 LSSNNFNGEIPSTFAKLTTLRDF 187          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.615e-11
Identity = 41/115 (35.65%), Postives = 59/115 (51.30%), Query Frame = 1
Query:  160 CTWSNVICDNS--------------------------NNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            C+W+ V CDN+                          +N+  + LSS N  G +P  +  L +L +L L  N +TGEIP +LG+L ++ SL + +N LVG IP +LGNL  LQ L
Sbjct:   58 CSWTGVTCDNTGLFRVIALNLTGLGLTGSISPWFGRFDNLIHLDLSSNNLVGPIPTALSNLTSLESLFLFSNQLTGEIPSQLGSLVNIRSLRIGDNELVGDIPETLGNLVNLQML 172          

HSP 2 Score: 68.9366 bits (167), Expect = 7.608e-11
Identity = 35/80 (43.75%), Postives = 47/80 (58.75%), Query Frame = 1
Query:  187 NSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            N  N+  + L   N  G LP +I  LR L  L L  N  +GEIP+E+GN +SL  +D+  N   G+IPPS+G LK+L  L
Sbjct:  406 NLTNLQWLVLYHNNLEGKLPKEISALRKLEVLFLYENRFSGEIPQEIGNCTSLKMIDMFGNHFEGEIPPSIGRLKELNLL 485          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.460e-11
Identity = 35/88 (39.77%), Postives = 50/88 (56.82%), Query Frame = 1
Query:  160 CTWSNVICDN-SNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQ 420
            C+WS V+CDN +  V S+ LS  N SG +P +I  L +L  L L GN + G  P  + +L+ LT+LD+  N      PP +  LK L+
Sbjct:   69 CSWSGVVCDNVTAQVISLDLSHRNLSGRIPIQIRYLSSLLYLNLSGNSLEGSFPTSIFDLTKLTTLDISRNSFDSSFPPGISKLKFLK 156          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.608e-11
Identity = 32/85 (37.65%), Postives = 52/85 (61.18%), Query Frame = 1
Query:  157 PCT-WSNVICDNSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNL 408
            PCT W  + C N N +  ++L  M  +GT+ P+ G +++L  + L  N +TG IP+EL  L +L +LD+ +N+L GK+P    N+
Sbjct:  350 PCTNWIGIACSNGN-ITVISLEKMELTGTISPEFGAIKSLQRIILGINNLTGMIPQELTTLPNLKTLDVSSNKLFGKVPGFRSNV 433          
The following BLAST results are available for this feature:
BLAST of DY258355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
Y5374_ARATH8.988e-1241.24Probable LRR receptor-like serine/threonine-protei... [more]
FLS2_ARATH8.988e-1234.00LRR receptor-like serine/threonine-protein kinase ... [more]
Y4361_ARATH1.174e-1129.86Probable LRR receptor-like serine/threonine-protei... [more]
Y2317_ARATH1.174e-1142.71Probable leucine-rich repeat receptor-like protein... [more]
RCH1_ARATH1.174e-1139.13LRR receptor-like serine/threonine-protein kinase ... [more]
Y1341_ARATH1.533e-1137.72Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH1.707e-1147.89Probable LRR receptor-like serine/threonine-protei... [more]
GSO1_ARATH2.615e-1135.65LRR receptor-like serine/threonine-protein kinase ... [more]
Y5148_ARATH4.460e-1139.77Probable leucine-rich repeat receptor-like protein... [more]
TMK1_ARATH7.608e-1137.65Probable receptor protein kinase TMK1 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BC08FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258355 ID=DY258355; Name=DY258355; organism=Citrus clementina; type=EST; length=1332bp
AATGACTCACATCTTTGCCCGTGAATGTGTGAAAAGGAATTGCTTCCGTT
AATCCCAAACAATCAGATTAGCAAAGATATACTGTATTTGCCCTCCATTA
CTCCTTTGCGTGTCCCAAACAATCAACAAAAAGATTGAAATCAAAACCAA
GTTAATCCTTGCACTTGGTCAAATGTCATTTGTGATAATAGCAACAATGT
TGCCTCTGTAACATTGTCTTCCATGAACTTTTCTGGAACCTTGCCCCCAA
AAATAGGAGTTCTGAGGACTCTTTCAACACTCACATTAAAAGGAAATGGC
ATAACTGGTGAAATACCTGAAGAGCTTGGTAATCTTTCAAGCTTGACAAG
CTTGGACTTGGAAAACAATCGCTTAGTTGGAAAAATACCACCTTCCCTTG
GCAATCTTAAAAAGCTTCAGTTCTTGTAAGTGATTCCATCAATAAAAATT
TCACTTTTAATCTATATGGTTTTTCTTCACCTTTTTTCATGATCTGGCAC
CAAAAGTCTCGATTTGTTTTTGATCGTTGAACCAGGACTTTGAGTCAAAA
CAATTTTAGTGGGACCATCCCTGATTCACTCACAACTCTTTCAAGCTTTG
ATCAGTATTCAGCTGGATTCAAATAATCTCAGTGGTCAAATTCCCGTGCC
TTTGCTCCCAATCCCCAAATACAATTTCCCGGGAAAACAACCGGAACCGG
GGAAAAACTCCTCCCACATTCCTGCGAATCTACTAGACAAGATTTCCGGT
AGTTCCAAGAAGCCCAAAAATGGAATATTAGTTCGGAATTGTTCGAGGAC
TTATAGTTTCTTATTCTCGAAAGCCTCCTATTTTTTCCCGTGGTACGGGG
ACACAAAAAAGCTACAACCCGTGAAACATTTTGCAAATGTTCCACGGGAA
ACTCAACCCCAAAAACTCGCCTTTGGTTCACCTAGAAAAAAAACTCCCTG
GAAGGAAATTACTCTTGGTCCACCCAAAATTTCCACCCAACAAAATGTCC
CTTGGAACCCGAAGGTTTTTGAGCAAATTTATACAAAACACCCCCTGGCC
CAATGGCCCCCAACACTTCCTCTTAAACCCCAATTAACCTATTTTCTAAA
AACCCCCGGGGCCGACAAACCCTCGCCTTCCTCCCCCCTCTAATATTCAC
AAAAAATAAAGAGCTACTCCCCCCCCCCCCCAACCCCCCTTCACAAAAAC
ACAAATTACCATTCTCTCCACACACCACCCCCCCTCCCCGCCACCCCCTT
CTCCCGTGCCTGTCCCTTCCCCCTTCCTCCTCTCTCTCACAAAACTTTCC
GACACTCCTTTCGCACCCCCCATCTCCCACTC
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