DY258382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDA1A_XENLA (Probable histone deacetylase 1-A OS=Xenopus laevis GN=hdac1-A PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.668e-35 Identity = 80/185 (43.24%), Postives = 119/185 (64.32%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEA-DEDQEDGDERWD--------------PDSDMDVDDERKSLPN--RVKREAVEPEQKDREGLKGMAEQARGFDMIAD 504 +F+++FN+PLL+LGGGGYTIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+ +L E L L HAP VQ Q DS ++ +ED++D D+R DS+ + + RK++ N +VKR E E+K+ E K + E+ + D D Sbjct: 286 EFIKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAVAEDSIHDDSGEEDEDDPDKRISIRSSDKRIACDEEFSDSEDEGEGGRKNVANFKKVKRVKTE-EEKEGEDKKDVKEEEKAKDEKTD 469
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC1_DROME (Histone deacetylase Rpd3 OS=Drosophila melanogaster GN=Rpd3 PE=1 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 2.179e-35 Identity = 80/193 (41.45%), Postives = 120/193 (62.18%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEA-DEDQEDGDERWDPDSDMDVDDERKSLPNRV---KREAVEPEQKDREGLKGMAEQARGFDMIADDSISTKVLDMSSMPIDEPSIK 567 +F++ +N+P L++GGGGYTIRNV+RCW YET VAL VE+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+N+L E L L HAP VQ Q P D+ E+ DED+ D D+R P SD D ++ +P + E ++D KG ++ R + D+ S K +S I + K Sbjct: 284 EFVKKYNLPFLMVGGGGYTIRNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPEDAINDESDDEDKVDKDDRL-PQSDKD----KRIVPENEYSDSEDEGEGGRRDNRSYKGQRKRPR----LDKDTNSNKASSETSSEIKDEKEK 467
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDA11_DICDI (Type-1 histone deacetylase 1 OS=Dictyostelium discoideum GN=hdaA PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.009e-34 Identity = 70/148 (47.30%), Postives = 99/148 (66.89%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDER---WDPD---------SDMDVDDERKSLPN 408 +F++SFNVPL++LGGGGYTI+NVARCW YET + + E+ D++P ++Y EY+GP+Y LH+ P+NMEN+N++ LE+++ +LLE L L HAP+ + PPDS DED ED D R D D SD D +D R++ N Sbjct: 281 EFLKSFNVPLVVLGGGGYTIKNVARCWTYETSILVDSELKDELPYNDYLEYYGPEYRLHITPNNMENQNTKDYLEKLKIQLLENLRNLNHAPAAAHHDIPPDSFNYSDDEDDEDPDVRISEADRDKKVHHQGELSDSDEEDGRRNYSN 428
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC1_STRPU (Histone deacetylase 1 OS=Strongylocentrotus purpuratus GN=HDAC1 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.154e-34 Identity = 66/131 (50.38%), Postives = 95/131 (72.52%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDER 393 +FM+ +N+PLLL+GGGGYTIRNVARCW YET ALGVE+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + L++I+ +L E + + HAP VQ Q P D+ +P+ D D ED E D + D+R Sbjct: 285 EFMKQYNLPLLLMGGGGYTIRNVARCWTYETSTALGVEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTGEYLDKIKTRLYENMRMIPHAPGVQMQPIPEDA-IPD-DSDAEDEAENPDKRISIMAQDKR 413
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC2_HUMAN (Histone deacetylase 2 OS=Homo sapiens GN=HDAC2 PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 1.196e-33 Identity = 70/160 (43.75%), Postives = 103/160 (64.38%), Query Frame = 1 Query: 7 MRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERKSLPNRVKREAVEPEQKDREGLKGMAEQARG 486 +++FN+PLL+LGGGGYTIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + +E+I+ +L E L L HAP VQ Q P D+ D EDG+ DPD + + K + E + E + G + +A+ +G Sbjct: 289 VKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDA--VHEDSGDEDGE---DPDKRISIRASDKRI--ACDEEFSDSEDEGEGGRRNVADHKKG 441
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC2_CHICK (Histone deacetylase 2 OS=Gallus gallus GN=HDAC2 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.196e-33 Identity = 70/160 (43.75%), Postives = 103/160 (64.38%), Query Frame = 1 Query: 7 MRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERKSLPNRVKREAVEPEQKDREGLKGMAEQARG 486 +++FN+PLL+LGGGGYTIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + +E+I+ +L E L L HAP VQ Q P D+ D EDG+ DPD + + K + E + E + G + +A+ +G Sbjct: 289 VKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDA--VHEDSGDEDGE---DPDKRISIRASDKRI--ACDEEFSDSEDEGEGGRRNVADHKKG 441
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC2_MOUSE (Histone deacetylase 2 OS=Mus musculus GN=Hdac2 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.561e-33 Identity = 70/159 (44.03%), Postives = 102/159 (64.15%), Query Frame = 1 Query: 10 RSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERKSLPNRVKREAVEPEQKDREGLKGMAEQARG 486 ++FN+PLL+LGGGGYTIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + +E+I+ +L E L L HAP VQ Q P D+ D EDG+ DPD + + K + E + E + G + +A+ +G Sbjct: 290 KTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDA--VHEDSGDEDGE---DPDKRISIRASDKRI--ACDEEFSDSEDEGEGGRRNVADHKKG 441
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDA7_ARATH (Histone deacetylase 7 OS=Arabidopsis thaliana GN=HDA7 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.553e-31 Identity = 62/121 (51.24%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDP 363 +++RSFNVPL++LGGGGYT+ NVARCWCYET +A+G ++D+ +P ++Y +YF PDY LH+ P+N +N N+R + +R LL LS + HAPSV FQ+ P S+ EA E D ++R DP Sbjct: 289 QYVRSFNVPLMILGGGGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYMKYFRPDYKLHILPTNRQNLNTRLDIITMRETLLAQLSLVMHAPSVPFQDTPSSSQATEAAE--VDMEKRNDP 407
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDA9_ARATH (Histone deacetylase 9 OS=Arabidopsis thaliana GN=HDA9 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.253e-31 Identity = 61/133 (45.86%), Postives = 92/133 (69.17%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDP---DSDMDVDDE 390 KF++ FN+PLL+ GGGGYT NVARCW ETG+ L E+ +++P+++Y +YF PD++L + ++EN N++ + I+ ++LE L +QHAPSVQ QE PPD +P+ DED+++ D R D D + DDE Sbjct: 283 KFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPDFDEDEQNPDVRADQRSRDKQIQRDDE 415
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDA17_ARATH (Histone deacetylase 17 OS=Arabidopsis thaliana GN=HDA17 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 6.140e-30 Identity = 60/133 (45.11%), Postives = 91/133 (68.42%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDP---DSDMDVDDE 390 KF++ FN+PLL+ GGGGYT NVARCW ETG+ L E+ +++ +++Y +YF PD++L + ++EN N++ + I+ ++LE L +QHAPSVQ QE PPD +P+ DED+++ D R D D + DDE Sbjct: 15 KFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEISENDYIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPDFDEDEQNPDVRVDQRSRDKQIQRDDE 147 The following BLAST results are available for this feature:
BLAST of DY258382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258382 ID=DY258382; Name=DY258382; organism=Citrus clementina; type=EST; length=815bpback to top |