DY258382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC3_XENTR (Histone deacetylase 3 OS=Xenopus tropicalis GN=hdac3 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.368e-29 Identity = 65/148 (43.92%), Postives = 92/148 (62.16%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERP-----------PDSE---------LPEADEDQEDGDERWDPDSDMDV 381 ++++SFN+PLL+LGGGGYT+RNVARCW YET + + + +++P EY+EYF PD+TLH + +EN+NSRQ L++IR + E L L HAPSVQ + P PD E PEA + DGD D +SD+++ Sbjct: 281 QYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDETISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSDILSYERTDEPDPEERGSEDNYSRPEASNEFYDGDHDNDKESDVEI 428
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC3_XENLA (Histone deacetylase 3 OS=Xenopus laevis GN=hdac3 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.786e-29 Identity = 65/148 (43.92%), Postives = 92/148 (62.16%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERP-----------PDSE---------LPEADEDQEDGDERWDPDSDMDV 381 ++++SFN+PLL+LGGGGYT+RNVARCW YET + + + +++P EY+EYF PD+TLH + +EN+NSRQ L++IR + E L L HAPSVQ + P PD E PEA + DGD D +SD+++ Sbjct: 281 QYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDETISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTVFESLKMLNHAPSVQIHDVPSDILNYERTDEPDPEERGGEDNYSRPEASNEFYDGDHDNDKESDVEI 428
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC3_CHICK (Histone deacetylase 3 OS=Gallus gallus GN=HDAC3 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.333e-29 Identity = 65/148 (43.92%), Postives = 92/148 (62.16%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERP-----------PDSE---------LPEADEDQEDGDERWDPDSDMDV 381 ++++SFN+PLL+LGGGGYT+RNVARCW YET + + + +++P EY+EYF PD+TLH + +EN+NSRQ L++IR + E L L HAPSVQ + P PD E PEA + DGD D +SD+++ Sbjct: 281 EYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSDLLSYDRTDEPDPEERGSEENYSRPEAANEFYDGDHDNDKESDVEI 428
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC3_TETNG (Histone deacetylase 3 OS=Tetraodon nigroviridis GN=hdac3 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.047e-29 Identity = 62/119 (52.10%), Postives = 82/119 (68.91%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDER 354 +F++SF +PLL+LGGGGYT+RNVARCW +ET + L + D++P EY+EYF PD+TLH + +EN+NSRQ LE+IR + E L L HAPSVQ + P D L D+ D DER Sbjct: 281 EFVKSFKIPLLVLGGGGYTVRNVARCWTFETSLLLEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTVFENLKMLNHAPSVQIHDVPSDM-LNYERNDEPDPDER 398
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC3_RAT (Histone deacetylase 3 OS=Rattus norvegicus GN=Hdac3 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.198e-29 Identity = 63/148 (42.57%), Postives = 90/148 (60.81%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPD--------------------SELPEADEDQEDGDERWDPDSDMDV 381 ++++SFN+PLL+LGGGGYT+RNVARCW YET + + + +++P EY+EYF PD+TLH + +EN+NSRQ L++IR + E L L HAPSVQ + P D PEA + DGD D +SD+++ Sbjct: 281 EYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDNDKESDVEI 428
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC3_PONAB (Histone deacetylase 3 OS=Pongo abelii GN=HDAC3 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.198e-29 Identity = 64/148 (43.24%), Postives = 92/148 (62.16%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQF------------------QERPPDSEL--PEADEDQEDGDERWDPDSDMDV 381 ++++SFN+PLL+LGGGGYT+RNVARCW YET + + + +++P EY+EYF PD+TLH + +EN+NSRQ L++IR + E L L HAPSVQ +ER P+ PEA + DGD D +SD+++ Sbjct: 281 EYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIRDVPAGLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDNDKESDVEI 428
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC3_HUMAN (Histone deacetylase 3 OS=Homo sapiens GN=HDAC3 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 5.198e-29 Identity = 63/148 (42.57%), Postives = 90/148 (60.81%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPD--------------------SELPEADEDQEDGDERWDPDSDMDV 381 ++++SFN+PLL+LGGGGYT+RNVARCW YET + + + +++P EY+EYF PD+TLH + +EN+NSRQ L++IR + E L L HAPSVQ + P D PEA + DGD D +SD+++ Sbjct: 281 EYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDNDKESDVEI 428
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC3_MOUSE (Histone deacetylase 3 OS=Mus musculus GN=Hdac3 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.788e-29 Identity = 63/144 (43.75%), Postives = 95/144 (65.97%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPD----SELPEADEDQEDGDERWD-PDS-----DMDVDDERKS 399 ++++SFN+PLL+LGGGGYT+RNVARCW YET + + + +++P EY+EYF PD+TLH + +EN+NSRQ L++IR + E L L HAPSVQ + P D EAD ++ +E + P++ D D D++++S Sbjct: 281 EYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDNDKES 424
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC3_DANRE (Histone deacetylase 3 OS=Danio rerio GN=hdac3 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.788e-29 Identity = 64/148 (43.24%), Postives = 92/148 (62.16%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHV-APSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQ---------ERPPDSE-----------LPEADEDQEDGDERWDPDSDMDV 381 +F++ F +PLL+LGGGGYT+RNVARCW +ET + + + D++P EY+EYF PD+TLH + +EN+NSRQ LE+IR + E L L HAPSVQ + ERP +++ PEA + DGD D +SD+++ Sbjct: 281 EFVKGFKIPLLVLGGGGYTVRNVARCWTFETSLLVEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTVFENLKMLNHAPSVQIRDVPSDLLSYERPDEADPEERGSEENFSRPEAANEFYDGDHDHDKESDVEI 428
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: CLR6_SCHPO (Histone deacetylase clr6 OS=Schizosaccharomyces pombe GN=clr6 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.747e-28 Identity = 57/121 (47.11%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 4 FMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADED----QEDGDER 354 F++SFN+P++ +GGGGYT+RNVAR W YETG+ G E+D+ +P ++Y +Y+GPDY L+V +NMEN N+RQ L+ I ++++E L L APSVQ + P D A++ +E DER Sbjct: 284 FVKSFNLPMICVGGGGYTVRNVARVWTYETGLLAGEELDENLPYNDYLQYYGPDYKLNVLSNNMENHNTRQYLDSITSEIIENLRNLSFAPSVQMHKTPGDFTFENAEKQNIAKEEIMDER 404 The following BLAST results are available for this feature:
BLAST of DY258382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258382 ID=DY258382; Name=DY258382; organism=Citrus clementina; type=EST; length=815bpback to top |