DY258383
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258383 vs. ExPASy Swiss-Prot
Match: CISY_ECOL6 (Citrate synthase OS=Escherichia coli O6 GN=gltA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.109e-11 Identity = 60/245 (24.49%), Postives = 111/245 (45.31%), Query Frame = 1 Query: 112 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYV--WKTLNSGQVVPGFGHGVLRKTDPRYTCQRE 819 G+ P++EQ D + + + + + A +HPM AL + + ++ + ++ ++ E + L++++P +AA Y+ + P++D L Y GNF +M+ +P + M + +H+DHE N S T S+ ++P+ AA + L GP HG AN+ L ++ + + + + ++V K N + GFGH V + DPR T RE Sbjct: 93 GEKPTQEQYDEFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALA--AFYHDSLD--VNNPRHREIA---AFRLLSKMPTMAAMCYKYSIGQPFVYPRND-LSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHEQ-NASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEI-------SSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRE 321
BLAST of DY258383 vs. ExPASy Swiss-Prot
Match: CISYP_DICDI (Citrate synthase, peroxisomal OS=Dictyostelium discoideum GN=cshA PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.448e-11 Identity = 64/250 (25.60%), Postives = 107/250 (42.80%), Query Frame = 1 Query: 112 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQV-QSEFQEAYEKG-IHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF-------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPRYTCQREFALNI 834 G +P+K Q+DG S ++ + + + + AHPM S V AL E A G I KS+ + ++ ++P +AA ++ P + L Y NF +ML +P + + + +H+DHE +A H+ +S +DPY S A A L GP HG AN+ VL + + + E + ++ + + + GFGH + + DPR R A + Sbjct: 128 GNLPNKSQLDGWSNKIMTHTFLHENLVGLMKTFRYDAHPMGMLISTVAALGTFYPEANPALAGGDIFKSE--NVRNKQIYRIVGKLPTIAACAWRHRIGRPYNTPVNH-LGYTENFLYMLDKLSEPDYKPNPVLCRALEILFILHADHELNCSTAAMRHISSSG-TDPYTSVAGAAGALYGPSHGGANEAVLDMLIHIGSK-------ENIPQFISDVKSKKKKLMGFGHRIYKNYDPRAKIIRRVAYEV 366
BLAST of DY258383 vs. ExPASy Swiss-Prot
Match: CISY_SALTY (Citrate synthase OS=Salmonella typhimurium GN=gltA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.470e-11 Identity = 59/245 (24.08%), Postives = 111/245 (45.31%), Query Frame = 1 Query: 112 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYV--WKTLNSGQVVPGFGHGVLRKTDPRYTCQRE 819 G+ P++E+ D + + + + + A +HPM AL + + ++ + ++ ++ E + L++++P +AA Y+ + P++D L Y GNF +M+ +P + M + +H+DHE N S T S+ ++P+ AA + L GP HG AN+ L ++ + + + + ++V K N + GFGH V + DPR T RE Sbjct: 93 GEKPTQEEYDEFRTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALA--AFYHDSLD--VNNPRHREIA---AFRLLSKMPTMAAMCYKYSIGQPFVYPRND-LSYAGNFLNMMFSTPCETYEVNPVLERAMDRILILHADHEQ-NASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEI-------SSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRE 321
BLAST of DY258383 vs. ExPASy Swiss-Prot
Match: CISY_BARQU (Citrate synthase OS=Bartonella quintana GN=gltA PE=3 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 3.226e-11 Identity = 66/240 (27.50%), Postives = 107/240 (44.58%), Query Frame = 1 Query: 112 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD--------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYV--WKTLNSGQVVPGFGHGVLRKTDPR 801 G++P+K++ + + V + + +HPM A V L S F Y I K + ++ LI++VP +AA Y+ + P++D L Y NF HM F +P + M T+H+DHE N S T LV S+ ++P+ AA + L GP HG AN+ L ++ + + E++ +++ K N + GFGH V + DPR Sbjct: 93 GELPTKQEKIDFDRCIMQHMMVHEQFTRFFHGFRRDSHPM---AVMVACLGAMSAF---YHDSID-IKDAQQRMIAAIRLISKVPTLAAMAYKYSIGQAFVYPRND-LSYAANFLHMC-FSVPCEEYKINPVLSRAMDRIFTLHADHEQ-NASTSTVRLVGSSGANPFACIAAGVACLWGPAHGGANEACLKMLQKI-------GSVERIPEFIARAKDKNDPFRLMGFGHRVYKNYDPR 315
BLAST of DY258383 vs. ExPASy Swiss-Prot
Match: CISY2_RHITR (Citrate synthase, plasmid OS=Rhizobium tropici GN=pcsA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.226e-11 Identity = 64/243 (26.34%), Postives = 105/243 (43.21%), Query Frame = 1 Query: 112 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQV----QSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLG-------FDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYV--WKTLNSGQVVPGFGHGVLRKTDPR 801 G++P+ Q + V + + + AHPM V AL ++ + +++ + SL +IA++P +AA Y+ + PK+D LDY NF M +P + M +H+DHE N S T L S+ ++P+ AA + L GP HG AN+ L +++ E G T +++ +Y+ K N + GFGH V + DPR Sbjct: 93 GELPTAAQKKDFDYRVVHHTMVHEQMSRFFTGFRRDAHPMAVMCGCVGALSAFYHDSTDITDPHQRMVA-----------SLRMIAKMPTLAAMAYKYHIGQPFVYPKND-LDYASNFLRMCFAVPCEEYVVNPVLARAMDRIFILHADHEQ-NASTSTVRLAGSSGANPFACIAAGIACLWGPAHGGANERAL----NMLTEIG---TVDRIPEYIARAKDKNDPFRLMGFGHRVYKNYDPR 315
BLAST of DY258383 vs. ExPASy Swiss-Prot
Match: CISY1_RHITR (Citrate synthase, chromosomal OS=Rhizobium tropici GN=ccsA PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 4.213e-11 Identity = 64/243 (26.34%), Postives = 105/243 (43.21%), Query Frame = 1 Query: 112 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQV----QSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLG-------FDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYV--WKTLNSGQVVPGFGHGVLRKTDPR 801 G++P+ Q + V + + + AHPM V AL ++ + +++ + SL +IA++P +AA Y+ + PK+D LDY NF M +P + M +H+DHE N S T L S+ ++P+ AA + L GP HG AN+ L +++ E G T +++ +Y+ K N + GFGH V + DPR Sbjct: 93 GELPTAAQKKDFDYRVVHHTMVHEQMSRFFTGFRRDAHPMAVMCGCVGALSAFYHDSTDITDPHQRMVA-----------SLRMIAKMPTLAAMAYKYHIGQPFVYPKND-LDYASNFLRMCFAVPCEEYVVNPVLARAMDRIFILHADHEQ-NASTSTVRLAGSSGANPFACIAAGIACLWGPAHGGANEAAL----NMLTEIG---TVDRIPEYIARAKDKNDPFRLMGFGHRVYKNYDPR 315
BLAST of DY258383 vs. ExPASy Swiss-Prot
Match: CISY_BARBA (Citrate synthase (Fragment) OS=Bartonella bacilliformis GN=gltA PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 5.502e-11 Identity = 68/240 (28.33%), Postives = 108/240 (45.00%), Query Frame = 1 Query: 112 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD--------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYV--WKTLNSGQVVPGFGHGVLRKTDPR 801 G++P+K+Q + + V + + +HPM A V L S F Y I+ + + S+ LI++VP +AA Y+ + P++D L+Y NF HM F P + M T+H+DHE N S T L S+ ++PY AA + L GP HG AN+ L ++ E G + +++ +++ K N + GFGH V + DPR Sbjct: 35 GELPNKQQKIDFDRCIMRHTMVHEQFARFFHGFRRDSHPM---AVMVACLGAMSAF---YHDSINITDPQQRMIA-SIRLISKVPTLAAMAYKYSIGQPFVYPRND-LNYATNFLHMC-FSVPCEEHKISPVIARAMDRIFTLHADHEQ-NASTSTVRLAGSSGANPYACIAAGVACLWGPAHGGANEACL----KMLQEIG---SVKKIPEFIARAKDKNDPFRLMGFGHRVYKNYDPR 257 The following BLAST results are available for this feature:
BLAST of DY258383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258383 ID=DY258383; Name=DY258383; organism=Citrus clementina; type=EST; length=1279bpback to top |