DY258387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RRMJ3_HUMAN (Putative rRNA methyltransferase 3 OS=Homo sapiens GN=FTSJ3 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.411e-32 Identity = 79/206 (38.35%), Postives = 112/206 (54.37%), Query Frame = 3 Query: 207 GKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCE 824 GK + +RD +Y AKE G+R+RSAFKL+Q++ F + + ++DLCAAPG W QV AK P S LIV +DL P+ P+ V+ +Q DIT R + + + K D+V+ DGAP+V D + Q+ L L L + L GG FI K+FR +D L + F V KP++SR+ S E F VC+ Sbjct: 5 GKVGKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVA-------AKFMPVSS-----LIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQ 198
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: SPB1_USTMA (AdoMet-dependent rRNA methyltransferase SPB1 OS=Ustilago maydis GN=SPB1 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.843e-32 Identity = 79/205 (38.54%), Postives = 114/205 (55.61%), Query Frame = 3 Query: 210 KASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCE 824 K ++ + D +Y AKE+G+R+R+AFKL+Q++++FN E + +DLCAAPG W QV S+ ++PA LIV +DL P+ PI I DI + + + + + KAD+V+ DGAP+V D + QS+L L L + L GG F+ K+FR KD + L F V KP SSRN S E F VC+ Sbjct: 8 KTAKGRLDKFYWLAKEQGYRSRAAFKLVQLNKKFNFLEKARCCIDLCAAPGGWLQVASK--FMPAN----------SLIVGVDLVPIKPIPRTITFAEDINSYKCRDQLRQILKDWKADIVIHDGAPNVGTAWVQDAYAQSELTLQSLRLAVEFLTAGGTFVTKVFRSKDYNNLLWVFNQLFKKVEATKPSSSRNVSAEIFVVCQ 200
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RLME_METTP (Ribosomal RNA large subunit methyltransferase E OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rlmE PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.843e-32 Identity = 78/201 (38.81%), Postives = 118/201 (58.71%), Query Frame = 3 Query: 216 SRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAV 818 +RD++D YYRKAKEEG+RARSA+KL QI+++F+I RVVDL AAPG W QV +RE ++V +DL+ + P+EG++ +QGDIT T E + G +AD+V+ D AP+++G+ D+D L A L + +L+ GG F+ K+F+G + ++K F V P +SR S E + + Sbjct: 2 ARDQKDHYYRKAKEEGYRARSAYKLKQINDKFHIIRRGSRVVDLGAAPGGWLQV--------------ARELSGGIVVGVDLERIEPLEGIVTIQGDITKEETLEQIAAALGG-QADVVISDAAPNLSGIWDVDHARSIDLSRAALRIAKRLLRPGGSFLVKVFQGDMFNDYLEEVKREFSSVHAYTPPASRKESAEIYVI 187
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RRMJ3_RAT (Putative rRNA methyltransferase 3 OS=Rattus norvegicus GN=Ftsj3 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 3.144e-32 Identity = 79/206 (38.35%), Postives = 112/206 (54.37%), Query Frame = 3 Query: 207 GKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCE 824 GK + +RD +Y AKE G+R+RSAFKL+Q++ F + + ++DLCAAPG W QV AK P S LIV +DL P+ P+ V+ +Q DIT R + + + K D+V+ DGAP+V D + Q+ L L L + L GG FI K+FR +D L + F V KP++SR+ S E F VC+ Sbjct: 5 GKVGKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVA-------AKFMPVSS-----LIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFHRVQATKPQASRHESAEIFVVCQ 198
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RRMJ3_MOUSE (Putative rRNA methyltransferase 3 OS=Mus musculus GN=Ftsj3 PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 3.144e-32 Identity = 79/206 (38.35%), Postives = 112/206 (54.37%), Query Frame = 3 Query: 207 GKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCE 824 GK + +RD +Y AKE G+R+RSAFKL+Q++ F + + ++DLCAAPG W QV AK P S LIV +DL P+ P+ V+ +Q DIT R + + + K D+V+ DGAP+V D + Q+ L L L + L GG FI K+FR +D L + F V KP++SR+ S E F VC+ Sbjct: 5 GKVGKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVA-------AKFMPVSS-----LIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFHRVQATKPQASRHESAEIFVVCQ 198
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: SPB1_KLULA (AdoMet-dependent rRNA methyltransferase SPB1 OS=Kluyveromyces lactis GN=SPB1 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 5.363e-32 Identity = 90/221 (40.72%), Postives = 116/221 (52.49%), Query Frame = 3 Query: 210 KASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIF-EAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCEIIPLLKDLTQRFAPP 869 K S+ + D YY AKE+G+RARS+FK++QI+E++ F E K V+DLCAAPGSW QV S L P + LI+ +D+ PM + VI Q DIT + + KAD V+ DGAP+V D F QS L L L + L GG F+ KIFR KD + L + F V KP +SRN S E F VC+ K L R P Sbjct: 8 KNSKGRLDKYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASN-------LCPVNS-----LIIGVDIVPMKTMPNVITFQSDITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLSWAQDAFTQSHLTLQALKLAVENLVVGGTFVTKIFRSKDYNKLIWVFQQLFEKVEATKPPASRNVSAEIFVVCKNFKAPKKLDPRLLDP 216
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RLME_PELUB (Ribosomal RNA large subunit methyltransferase E OS=Pelagibacter ubique GN=rlmE PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 7.004e-32 Identity = 80/205 (39.02%), Postives = 122/205 (59.51%), Query Frame = 3 Query: 216 SRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCEII 830 ++ KRDIY R+++ +G+RARSA+KL++IDE+F IF+ V+DL A+PGSWSQ +SR + + G L V+IDL+ M IE IQ++GD T+ + E + F K D+VV D A + TG+ D+D +L + + +L + G+F++KIF G + + K F V KPKSSR S E+F +C+I+ Sbjct: 12 NKQKRDIYVRQSQVDGYRARSAYKLIEIDEKFKIFKNGISVIDLGASPGSWSQYISRTV----------KSGRL---VSIDLKGMEEIENTIQIKGDFTDLESQEKIKALFKS-KVDVVVSDMAVNTTGIKDIDAIYTGELAMEAMNFSKEMLVKEGRFVSKIFLGSSFNEIVALGKKLFKEVKVFKPKSSRKESKESFIICKIL 202
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: SPB1_DEBHA (AdoMet-dependent rRNA methyltransferase SPB1 OS=Debaryomyces hansenii GN=SPB1 PE=3 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 7.744e-31 Identity = 87/221 (39.37%), Postives = 116/221 (52.49%), Query Frame = 3 Query: 210 KASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIF-EAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCEIIPLLKDLTQRFAPP 869 K S+ + D YY AKE+G+RARS+FK++QI+E++ F E K V+DLCAAPGSW QV S+ L P + LI+ +D+ P+ + I Q DIT + H KAD V+ DGAP+V D F QS L L L + L GG F+ KIFR +D + L + F V KP +SRN S E F VC+ K + R P Sbjct: 7 KNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASQ-------LCPINS-----LIIGVDIVPIKALPNCITFQSDITTEDCRSQLRGHMKTWKADTVLHDGAPNVGLGWVQDAFTQSHLTLQALKLAVENLNTGGTFVTKIFRSRDYNNLMWVFQQLFEKVEATKPPASRNVSAEIFVVCKGYKSPKKMDPRLLDP 215
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RRMJ3_DICDI (rRNA methyltransferase 3 homolog OS=Dictyostelium discoideum GN=fsjC PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.253e-30 Identity = 74/205 (36.10%), Postives = 112/205 (54.63%), Query Frame = 3 Query: 210 KASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCE 824 K ++ + D +Y AKE+G+R+R+AFKL+Q+++++N K +DLCAAPG W QV S+ Y+P + LIV +DL P+ + I + DIT + + + K D+ + DGAP++ D + Q++L L L + T L GG F+ K+FRG D + L F V KP SSRN+S E F VC+ Sbjct: 7 KLAKGRLDKFYYMAKEQGYRSRAAFKLIQLNKKYNFLGTAKACLDLCAAPGGWMQVASK--YMPVQ----------SLIVGVDLVPIRQVRNCIGLTEDITTQKCRTEIKKALKTWKVDVCLHDGAPNMGTSWVQDAYQQAELTLHALKLATEFLTTGGWFVTKVFRGSDYNSLIWVFNKLFKKVESTKPPSSRNASAEIFVVCQ 199
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RLME_VARPS (Ribosomal RNA large subunit methyltransferase E OS=Variovorax paradoxus (strain S110) GN=rlmE PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 2.491e-29 Identity = 81/198 (40.91%), Postives = 111/198 (56.06%), Query Frame = 3 Query: 231 DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPD-SREGDLP-LIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAV 818 D Y + A EG+RAR+A+KL +IDE + + + VVDL + PG+WSQ YL ++SP+ + G+L I+A+D+ PM PIEGV +QGD A E V+ G KADLVV D AP+++G+H D + LI + H LK G +AK+F G L K F V KPK+SR+ S E F V Sbjct: 21 DPYVKLATREGYRARAAYKLKEIDESLGLVKPGQLVVDLGSTPGAWSQ------YLRRRMSPEGAAAGELNGTIIALDILPMEPIEGVTFLQGDFREAELLEQVLGVLAGRKADLVVSDMAPNLSGIHSADAARVAHLIELAIDFAQHHLKPEGALVAKLFHGSGYDELVKLFKANFRTVKPFKPKASRDKSSETFLV 212 The following BLAST results are available for this feature:
BLAST of DY258387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258387 ID=DY258387; Name=DY258387; organism=Citrus clementina; type=EST; length=1227bpback to top |