DY258387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RLME_WOLTR (Ribosomal RNA large subunit methyltransferase E OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=rlmE PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.236e-28 Identity = 74/200 (37.00%), Postives = 108/200 (54.00%), Query Frame = 3 Query: 219 RDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAV 818 R D Y +K ++ +R+RSA+KL++ID +F + +A +++VDL A+PG WSQV S+K +VAID++P+ I GV +Q DI T F K D+++ D AP+ GL +D L A L H L GGKF+ KIF+G+ Y +LK F +V + KPKSSR+ S E + V Sbjct: 24 RHLNDQYVQKTNKDSYRSRSAYKLIEIDNKFKLLQAGQKIVDLGASPGGWSQVASQKGVK---------------VVAIDIKPVNTISGVKYIQYDINELETLR---ERFKDQKFDVILSDMAPESCGLKSLDHIRIMLLCEAALNFAKHFLNYGGKFVVKIFQGESDKDFYNELKKMFKIVKYFKPKSSRSESTEMYLV 205
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RLME_METAC (Ribosomal RNA large subunit methyltransferase E OS=Methanosarcina acetivorans GN=rlmE PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.047e-27 Identity = 74/201 (36.82%), Postives = 113/201 (56.22%), Query Frame = 3 Query: 216 SRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAV 818 +RD+RD YY +AKEEG+R+R++FKL QI+E+ N+ + VVDL AAPG W QV +LS ++ +DLQ +APIEGV +QGDI T + +IR AD+V+CD AP+++G D +L + L +LK G F+ K+F+G + +++ F V P++SR+ S E + + Sbjct: 2 ARDRRDYYYHQAKEEGYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWLQVAK-------QLSGGK-------VLGVDLQRIAPIEGVETIQGDINADSTIKKIIRAVGEKGADVVLCDAAPNLSGNWSYDHARSIELTTSALECAKKILKPKGNFVVKVFQGDMFNDYLEKVRDNFVHVKAYSPQASRSQSAEIYVI 188
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RLME_NOVAD (Ribosomal RNA large subunit methyltransferase E OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=rlmE PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.367e-27 Identity = 77/203 (37.93%), Postives = 104/203 (51.23%), Query Frame = 3 Query: 216 SRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCE 824 SR D Y +KAK EGWR+R+AFKL+++DE+F + + KRVVDL APG WSQV+ +K +P ++ IV IDL P PIEGV + D E + DG DLV+ D A + G D L+ + L GG F+AK+F G + L LK F V AKP +SR S E + + + Sbjct: 27 SRQLNDPYVKKAKAEGWRSRAAFKLIELDEKFGLLKGAKRVVDLGIAPGGWSQVVRKK-------APAAK------IVGIDLLPTEPIEGVTIFEMDFMADEAPEALQSALDG-PPDLVLSDMAANTVGHKQTDHLRTMGLVETAVDFAVQTLAPGGAFVAKVFAGGTDTELLAILKKNFTTVKHAKPPASRKDSSEWYVIAQ 215
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RLME_METST (Ribosomal RNA large subunit methyltransferase E OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rlmE PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.367e-27 Identity = 74/205 (36.10%), Postives = 117/205 (57.07%), Query Frame = 3 Query: 210 KASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPI--EGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAV 818 KA DK YY+ AK++ +R+R+++KL Q+D+++++ + VVDL AAPG WSQV++ + EG I+++DL+ + PI E V+GD T T +++I DG KAD+V+ D AP +TG+ D+D F L +A + ++ ++LK G I K F+G+ + LK F V KP SSR S E + + Sbjct: 5 KAKHDKEH-YYKLAKKQNYRSRASYKLKQLDKKYSLLKPDYNVVDLGAAPGGWSQVVAETI---------GEEGK-GQIISVDLEYIKPIDHEAYTGVKGDFTTKETQDIIIELIDG-KADVVLSDAAPKLTGIKDIDNFRAYDLSMAVIEIIDNILKNNGNLIMKAFQGEAYQEIIKNLKKKFRNVKTTKPNSSRKRSAEMYVI 197
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RLME_METJA (Ribosomal RNA large subunit methyltransferase E OS=Methanocaldococcus jannaschii GN=rlmE PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.785e-27 Identity = 72/205 (35.12%), Postives = 115/205 (56.10%), Query Frame = 3 Query: 225 KRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIE--GVIQVQGDIT---NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCE 824 KRD YY+ AK+ +R+R++FKL+Q++E+FN+ + K V+DL APG W QV +R++ GD ++ IDLQP+ P E V+ ++GD T N +I + D K D+V+ D +P+++G D+D L+ L + T +LKE G F+AK+F G +K +F V KP++SR S E + + + Sbjct: 13 KRDFYYKLAKKLKYRSRASFKLMQLNEKFNVIKPGKIVLDLGCAPGGWMQV-AREIV-----------GDKGFVIGIDLQPVKPFEYDNVVAIKGDFTLEENLNKIRELIPN-DEKKVDVVISDASPNISGYWDIDHARSIDLVTTALQIATEMLKERGNFVAKVFYGDMIDDYVNLVKKYFEKVYITKPQASRKESAEVYVIAK 204
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RLME_WOLPM (Ribosomal RNA large subunit methyltransferase E OS=Wolbachia pipientis wMel GN=rlmE PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.045e-27 Identity = 71/196 (36.22%), Postives = 108/196 (55.10%), Query Frame = 3 Query: 231 DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAV 818 D Y +K ++G+R+RSA+KL+++D +F +F+ ++++DL A+PG WSQV S+K +VA+D++PM I GV +Q DI N E++ F K D+++ D AP+ GL +D L A L H L GG F+ KIF+G+ +LK F V + KPKSSR+ S E + V Sbjct: 3 DQYVQKTSKDGYRSRSAYKLVEMDNKFKLFQEGQKIIDLGASPGGWSQVASQKG---------------ANVVALDIKPMNAINGVEFIQCDIINE--FEILREKFKDQKFDVILSDMAPESCGLKSLDHIRIMLLCEAALNFAKHFLSHGGTFVVKIFQGESDKDFCNELKKMFKTVKYFKPKSSRSESTEMYLV 181
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RLME_METBF (Ribosomal RNA large subunit methyltransferase E OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rlmE PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 6.784e-27 Identity = 71/201 (35.32%), Postives = 110/201 (54.73%), Query Frame = 3 Query: 216 SRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAV 818 +RD+RD YYR+AKEEG+R+R++FKL QI+E +I VVDL AAPG W QV ++E ++ +DLQ + PIEGV +QG+I T + +I+ AD+V+CD AP+++G D +L + L +LK G F+ K+F+G + +++ F PK+SR+ S E + + Sbjct: 2 ARDRRDYYYRQAKEEGYRSRASFKLKQINERHHIINRGDSVVDLGAAPGGWLQV--------------AKELSGGKVLGVDLQRIVPIEGVETIQGNINADSTIQKIIKTVGAKGADVVLCDAAPNLSGNWSYDHARSIELATSALECAKKILKPKGNFVVKVFQGDMFNDYMQKVRDNFVRTMAYSPKASRSQSAEIYVI 188
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RLME_ARCFU (Ribosomal RNA large subunit methyltransferase E OS=Archaeoglobus fulgidus GN=rlmE PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 6.784e-27 Identity = 71/200 (35.50%), Postives = 110/200 (55.00%), Query Frame = 3 Query: 219 RDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAV 818 +D++D YY KAK+EG+R+R+A+KLLQ++ F + V+DL A PG WSQV + L A+ +VA+D+ PM P+E V ++GDIT T E IR D+V+ D +P ++G +D L A ++ VLK GG F+ K+F+G++ + +LK F F P++SR S E + + Sbjct: 2 KDRQDYYYWKAKKEGYRSRAAYKLLQMNRTFKLIREGDLVLDLGATPGGWSQVAA---LLGAR------------VVAVDINPMKPLENVTFIRGDITLPETLE-KIREISP-DYDVVMSDASPKISGKWTIDHLRSIDLARASFSIAKEVLKPGGNFVVKVFQGEEIQKFFNELKPHFRFKKFHSPQASRKRSAEVYFI 184
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RLME_RICAH (Ribosomal RNA large subunit methyltransferase E OS=Rickettsia akari (strain Hartford) GN=rlmE PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.157e-26 Identity = 81/200 (40.50%), Postives = 109/200 (54.50%), Query Frame = 3 Query: 219 RDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAV 818 R D Y KA+ EG+R+R+A+KLL+I E+F +F ++VDL AAPG WSQV S+ + K S +S I++IDL + PI GV +Q D T E++I+ DG KAD+V+ D A + TG D L VLK G FIAKIFRG + L ++K F V KP SSR+ S E + V Sbjct: 31 RQLNDPYVAKARIEGFRSRAAYKLLEIHEKFKLFTPNMKIVDLGAAPGGWSQVASKLI----KASDNSLNNK---IISIDLLEIEPIIGVEFLQKDFFEENTEELIIQVLDG-KADIVMSDMASNTTGHKATDHIRTLLLCEQAFEFALKVLKPSGHFIAKIFRGGAENELLNKVKCEFKTVKHFKPSSSRSESTEIYLV 222
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RLME_META3 (Ribosomal RNA large subunit methyltransferase E OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rlmE PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.157e-26 Identity = 66/200 (33.00%), Postives = 109/200 (54.50%), Query Frame = 3 Query: 225 KRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPI--EGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAV 818 K D YY+ AK+ +R+R+++KLLQ++E+F I VVDL APG W Q + G+ ++ +DLQ + P+ E ++ +QGD+T T +I KAD+V+CD +P+++G+ ++D +L L L TH+L++ G F+ K+F+G L +F V KPK+SR+ S E + + Sbjct: 13 KNDFYYKLAKQNHYRSRASYKLLQLNEKFEIIYEGDNVVDLGCAPGGWLQASYDLV------------GEDGFVIGVDLQKVKPLREENIVAIQGDMTKKETINKIIDLMPS-KADVVICDASPNISGVWEVDHSRSIELSLMALIATTHLLRKNGNFVVKVFQGSLFDQYVQLLTKYFKKVQTTKPKASRSVSAEVYVI 199 The following BLAST results are available for this feature:
BLAST of DY258387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258387 ID=DY258387; Name=DY258387; organism=Citrus clementina; type=EST; length=1227bpback to top |