DY258387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RLME_WIGBR (Ribosomal RNA large subunit methyltransferase E OS=Wigglesworthia glossinidia brevipalpis GN=rlmE PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.720e-12 Identity = 52/196 (26.53%), Postives = 99/196 (50.51%), Query Frame = 3 Query: 231 DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAV 818 D + +++K+ +R+R+ FK+ +I ++ NI + V+D+ ++PG WS+ S+K+ + K ++A D+ M PI V + G+I T + + + K +++CD +P++TGL +D L L + ++L + GK I K F + +++ F + KP SSR+ S E + V Sbjct: 16 DKFVKESKKCKYRSRAWFKIDEIQKKNNIIKPGMVVLDIGSSPGGWSKYSSQKVGMSGK------------VIACDIDLMNPIPNVSFILGNIFEKITIKKIKKVKK--KVHIILCDISPNITGLSIIDHSRWISLNNNILNICKYLLLKNGKLIIKSFNSVEIKNFCKKIENSFKKIKIFKPISSRSRSKEIYIV 197
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RLME_DESOH (Ribosomal RNA large subunit methyltransferase E OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=rlmE PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.373e-11 Identity = 60/205 (29.27%), Postives = 89/205 (43.41%), Query Frame = 3 Query: 219 RDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---PIEGVIQVQGDITNARTAEVVIRHFDGC--KADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAV 818 R D Y RKAK E + ARS +KL +I ++ N+ + V+DL PGSW + + K + IDL+ +A P + +Q DI E+ G D+V+ D APD G D L A L + +LK GG F+ K+F+G+D +K F KP++ R S E + + Sbjct: 9 RKTPDHYARKAKTEHYPARSVYKLQEIQKKHNVLKPGNAVLDLGCFPGSWMMFAAETVGRGGK------------VTGIDLKKVATHMPAQAT-SLQEDI-----YEIDREALAGTLGPLDVVLSDMAPDTMGNKFTDAARSFHLAAAALDLALFLLKPGGHFVCKVFQGEDFQNFVNMVKAEFERHKVFKPETCRKDSKETYVI 195
BLAST of DY258387 vs. ExPASy Swiss-Prot
Match: RLME_DESPS (Ribosomal RNA large subunit methyltransferase E OS=Desulfotalea psychrophila GN=rlmE PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 8.902e-11 Identity = 59/208 (28.37%), Postives = 88/208 (42.31%), Query Frame = 3 Query: 219 RDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQ--------PMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAV 818 R D Y +KAK++ + ARS +KL + ++++I ++DL PGSWS +Y P ++V +DLQ API + + DI E V R + +++ D AP TG D L L + VL G +I K+F+G D +K F KP+SSR S E F + Sbjct: 2 RKINDYYAKKAKKDNYPARSIYKLEEAQKKYDIISRGDSILDLGCFPGSWS------IYASELAGPKG------IVVGVDLQQAVGGGRADAAPIHWICE---DIREPAMLEAVRRIRPSFR--VLISDMAPKTTGNRWTDAQQSLNLCYQTLEIAEQVLLNKGNYICKVFQGGDFPDFVDAVKKRFESARVIKPQSSRIESREVFVL 192 The following BLAST results are available for this feature:
BLAST of DY258387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258387 ID=DY258387; Name=DY258387; organism=Citrus clementina; type=EST; length=1227bpback to top |