DY258401

Overview
NameDY258401
Unique NameDY258401
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1303
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258401 vs. ExPASy Swiss-Prot
Match: PPR2_ARATH (Pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.174e-16
Identity = 67/244 (27.46%), Postives = 102/244 (41.80%), Query Frame = 1
Query:   55 LMDAYFKAGEPSEALVLQDEVLDSI-IEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKR--DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSR-------------------------------------CGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGLLSG 666
            L+    K G    A  L DE+  +  +     TF  LI+G CKN +V EA   F  +  +   P+V  Y  +IDGLC+   ++ A N+   MLK+  D+ P+  +YT L+ GY   +   EA+ + + M   G+  +   Y +L+ GLS                                       GHL  A  +F EM+   + PD      L++ L  R   D A  L NE+  + +L G
Sbjct:  179 LLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLG 422          

HSP 2 Score: 73.1738 bits (178), Expect = 3.910e-12
Identity = 47/179 (26.26%), Postives = 90/179 (50.28%), Query Frame = 1
Query:  151 FCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKR-DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG--ILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGLLSGS*TY 678
            F  LI      GL +E++  F  +   G+ P+V  + +L+  L K+     A +LFDEM +   + PD+  +  LI+G+ K+    EA  +   M     + D+  Y +++ GL R G ++ A  +   M+ +   + P+ +   +L++    +  +DEA+ + ++M+ RGL   + TY
Sbjct:  141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTY 319          
BLAST of DY258401 vs. ExPASy Swiss-Prot
Match: PP396_ARATH (Pentatricopeptide repeat-containing protein At5g24830 OS=Arabidopsis thaliana GN=At5g24830 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.174e-16
Identity = 56/179 (31.28%), Postives = 86/179 (48.04%), Query Frame = 1
Query:  142 VVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGLLSGS*TY 678
            V T+  LI  LCK G   EA D  G + + G+ P+   Y  +I GLC    + RA      MLK  ++P+   +  +IDGY ++     AL++ N M   GV  ++    +L+ G  + G L +A  + +EM    I PD      LL      G++  A +L++EM+ RG      TY
Sbjct:  335 VFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITY 513          

HSP 2 Score: 82.8037 bits (203), Expect = 4.934e-15
Identity = 59/216 (27.31%), Postives = 98/216 (45.37%), Query Frame = 1
Query:   55 LMDAYFKAGEPSEALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCI-ERARNLFDEMLKRDMIP---DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGLLSGS*TYALPI 690
            L++   KAG   +A  L  E+ +       V++  LI GLC    V +A+  F  +  +G+RPN      ++  LC+K  I    + L +E+L         D    T L+D   K+ +  +AL +   M++  V  D   Y  ++ GL   G++  A     +M+ RG+ PD     +L+  L + G  DEA +LH  M   G+     +Y + I
Sbjct:  162 LLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVII 377          

HSP 3 Score: 80.8777 bits (198), Expect = 1.875e-14
Identity = 56/201 (27.86%), Postives = 94/201 (46.77%), Query Frame = 1
Query:   55 LMDAYFKAGEPSEALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGL 657
            L+ A  K G+  EA  L   + +  +    +++ V+I GLC +G V  A ++   +    L P V ++  +IDG  +      A ++ + ML   + P+     ALI GY+K     +A  +KN M    +  D   Y  L+      GHL+ A  L+ EM+ RG  PD I    L++ L  +G + +A  L + +   G+
Sbjct:  341 LISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGI 541          

HSP 4 Score: 75.485 bits (184), Expect = 7.878e-13
Identity = 51/188 (27.13%), Postives = 85/188 (45.21%), Query Frame = 1
Query:  103 LQDEVLDSI---IEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGL 657
            L +E+LDS      + +V   +L+D   KNG V +A++ +  +    +  +  VY  +I GLC    +  A     +M+KR + PD   Y  LI    K   F EA +L   M   GV  D  +Y  ++ GL   G +  A      M+   +LP+ +L   ++      G+   A+ + N M+  G+
Sbjct:  249 LLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGV 436          
BLAST of DY258401 vs. ExPASy Swiss-Prot
Match: PP158_ARATH (Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.174e-16
Identity = 58/211 (27.49%), Postives = 102/211 (48.34%), Query Frame = 1
Query:   55 LMDAYFKAGEPSEALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFG--RLPDF-GL-RPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGLLSGS*T 675
            ++ ++ + G   ++  + +++ +  +   +VTF   I  LCK G V +A   F    L ++ GL RPN   Y  ++ G CK   +E A+ LF+ + + D +    +Y   + G ++H  F EA  +  +MT+ G+   + +Y  L+ GL + G L +A+ +   M   G+ PD +    LL      G +D A  L  EMM    L  + T
Sbjct:  223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433          

HSP 2 Score: 85.1149 bits (209), Expect = 9.943e-16
Identity = 61/224 (27.23%), Postives = 102/224 (45.54%), Query Frame = 1
Query:   55 LMDAYFKAGEPSEALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAID-------------------YFGRLPDFGLR----PNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGL 657
            L+ + +K G  SEA  L  ++ +    +  VT  +++DGLC +G + +AI+                   Y G + D  +     P++  Y+ L++GLCK      A+NLF EM+   + PD+ AY   I  + K      A  +   M + G    L  Y SL+ GL     + E   L  EM  +GI P+     + ++ L E   +++A  L +EMM + +
Sbjct:  437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNI 660          

HSP 3 Score: 79.337 bits (194), Expect = 5.456e-14
Identity = 60/223 (26.91%), Postives = 95/223 (42.60%), Query Frame = 1
Query:   79 GEPSEALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA-----------------------RVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGLLSGS*TY 678
            G+  EA  +  ++ D  I  ++ ++ +L+DGLCK G++ +A    G +   G+ P+   Y  L+ G C    ++ A++L  EM++ + +P+      L+    K     EA  L  +M E G  LD      +V GL   G L +A                        ++   +I    LPD I   +LL  L + G   EA  L  EMMG  L   S  Y
Sbjct:  340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562          
BLAST of DY258401 vs. ExPASy Swiss-Prot
Match: PP161_ARATH (Pentatricopeptide repeat-containing protein At2g17670 OS=Arabidopsis thaliana GN=At2g17670 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.534e-16
Identity = 58/192 (30.21%), Postives = 94/192 (48.96%), Query Frame = 1
Query:  109 DEVLDSI-IEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGLLSGS*TYA 681
            DE+ D   ++  +V+F +LID +C +  +REA+    +L + G +P+  +Y  ++ G C  +    A  ++ +M +  + PD   Y  LI G  K    +EA      M + G + D   YTSL+ G+ R G    A  L  EM  RG  P++    +LL  L +   MD+ +EL+  M   G+   S  YA
Sbjct:  218 DEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYA 409          

HSP 2 Score: 85.5001 bits (210), Expect = 7.613e-16
Identity = 58/190 (30.53%), Postives = 90/190 (47.37%), Query Frame = 1
Query:   55 LMDAYFKAGEPSEALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL------LKKLYERG 606
            +M  +    + SEA+ +  ++ +  +E   +T+  LI GL K G V EA  Y   + D G  P+ A YT+L++G+C+K     A +L +EM  R   P+   Y  L+ G  K     + + L   M   GV L+ N Y +LV  L + G + EA  +F   +    L D     +L      LKK  E+G
Sbjct:  271 IMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTLKWLKKAKEQG 460          

HSP 3 Score: 80.8777 bits (198), Expect = 1.875e-14
Identity = 56/219 (25.57%), Postives = 88/219 (40.18%), Query Frame = 1
Query:  130 IEVTVVTFCVLIDGLCKNGLVREAIDYFGRL------------------------------------PDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGLLSGS*TY 678
            +E   VT  + +  LC+ G V EA D    L                                     DF ++P++  +T LID +C    +  A  L  ++      PD   Y  ++ G+       EA+ +  +M E GV+ D   Y +L++GLS+ G ++EAR+    M+  G  PD     SL+  +  +G    A+ L  EM  RG      TY
Sbjct:  155 LEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTY 373          
BLAST of DY258401 vs. ExPASy Swiss-Prot
Match: PPR22_ARATH (Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana GN=At1g08610 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.616e-16
Identity = 56/206 (27.18%), Postives = 94/206 (45.63%), Query Frame = 1
Query:   73 KAGEPSEALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGLLSGS*TYALPI 690
            + G   E   +   +L   +E+  VT+  L+  LC +    E  +    +      P V  Y  LI+GLCK   + RA + F +ML++  +PD   Y  ++    K     +A+ L   +        L  Y S++ GL++ G +++A  L+H+M+  GI PD+I   SL+        ++EA ++  E   RG      TY L I
Sbjct:  291 RRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVI 496          

HSP 2 Score: 79.7221 bits (195), Expect = 4.177e-14
Identity = 50/196 (25.51%), Postives = 98/196 (50.00%), Query Frame = 1
Query:   55 LMDAYFKAGEPSEALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEM 642
            L++   KA   S A+    ++L+      +VT+  ++  + K G+V +AI+  G L +    P +  Y ++IDGL KK  +++A  L+ +ML   + PD     +LI G+ +    +EA  +    +  G  +  + Y  ++ GL +   ++ A  +   M+  G  PDE +  +++K + E G   EA++L  ++
Sbjct:  355 LINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQKKL 550          

HSP 3 Score: 69.3218 bits (168), Expect = 5.646e-11
Identity = 43/187 (22.99%), Postives = 87/187 (46.52%), Query Frame = 1
Query:   70 FKAGEPSEALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIEL 630
            F  G   +A+    + L +     ++T+ VL++ +C+      AI+    +   G  P++  Y +L++  C++  +E   ++   +L   +  +T  Y  L+     HE + E   + N M +      +  Y  L+ GL +   L  A   F++M+ +  LPD +   ++L  + + G +D+AIEL
Sbjct:  220 FDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL 406          
BLAST of DY258401 vs. ExPASy Swiss-Prot
Match: PP392_ARATH (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.616e-16
Identity = 60/202 (29.70%), Postives = 96/202 (47.52%), Query Frame = 1
Query:   55 LMDAYFKAGEPSEALVL-QDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGL 657
            LMD  F      EA+ L +D +    I    VTF V+I+G C+ G V  A      +   G  PNV  Y+AL++G CK   I+ A+  FDE+ K  +  DT  YT L++ + ++    EA+ L   M       D   Y  ++ GLS  G  +EA  +  +    G+  ++     +L  L   G +++A++  + M  RG+
Sbjct:  238 LMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI 439          

HSP 2 Score: 73.1738 bits (178), Expect = 3.910e-12
Identity = 51/204 (25.00%), Postives = 90/204 (44.12%), Query Frame = 1
Query:   55 LMDAYFKAGEPSEALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGLLSG 666
            +++ + +AGE   A  + D +  +     V  +  L++G CK G ++EA   F  +   GL+ +   YT L++  C+    + A  L  EM       DT  Y  ++ G       +EAL + ++    GV L+  +Y  ++  L   G L++A      M  RGI P       L+ +L E G  +  + +    +  GL+ G
Sbjct:  274 MINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPG 477          

HSP 3 Score: 69.3218 bits (168), Expect = 5.646e-11
Identity = 47/178 (26.40%), Postives = 88/178 (49.44%), Query Frame = 1
Query:  151 FCVLIDGLCKNGLVREAIDYFGRLPDFGLR-PNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGLLSGS*TY 678
            F +L+   CKNG +  A      +   G+  PN   Y+ L+D L   +  + A  LF++M+ ++ I PD   +  +I+G+ +    + A  + + M + G + ++  Y++L+ G  + G +QEA+  F E+   G+  D +   +L+      G  DEA++L  EM      + + TY
Sbjct:  199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTY 376          
BLAST of DY258401 vs. ExPASy Swiss-Prot
Match: PP368_ARATH (Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial OS=Arabidopsis thaliana GN=At5g08310 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.616e-16
Identity = 54/171 (31.58%), Postives = 82/171 (47.95%), Query Frame = 1
Query:  142 VVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRG 654
            V+ + VLI  LCK     EA   F  +   GL+P VA Y ++IDG CK+  I+R  +    M + +  PD   YT+LI G        EA+   N M       +   + +L+ GL +CG   EA V F EM  + + PD  + +SL+       N++    +  EM+ +G
Sbjct:  614 VIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784          

HSP 2 Score: 82.0333 bits (201), Expect = 8.417e-15
Identity = 59/188 (31.38%), Postives = 87/188 (46.28%), Query Frame = 1
Query:   79 GEPSEALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEM 642
            G   +A    D+V        +V     IDGL KN  V   ++ F  +   G  P+V  Y  LI  LCK      A  LF+EM+ + + P    Y ++IDG+ K       L+   RM E   + D+  YTSL+ GL   G   EA   ++EM G+   P+ I  ++L++ L + G   EA+    EM
Sbjct:  558 GRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREM 745          

HSP 3 Score: 75.8702 bits (185), Expect = 6.032e-13
Identity = 55/187 (29.41%), Postives = 87/187 (46.52%), Query Frame = 1
Query:   55 LMDAYFKAGEPSEALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP-----DEILCISLLKKLYE 600
            L+ A  KA    EA +L +E++   ++ TV T+  +IDG CK G +   +    R+ +    P+V  YT+LI GLC       A   ++EM  +D  P+   + ALI G  K     EAL     M E  ++ D   Y SLV       ++     +F EM+ +G  P     + +L +++  K  E
Sbjct:  620 LIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSKFVE 806          

HSP 4 Score: 70.0922 bits (170), Expect = 3.310e-11
Identity = 61/231 (26.41%), Postives = 105/231 (45.45%), Query Frame = 1
Query:   55 LMDAYFKAGEPSEALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV-DLDLNA----YTSLVWGLSRCGHLQEARVLFHEMIG------------------RGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGLLSGS*TY 678
            L+ ++ K G+  +A  L + + +  I +   T+CVLI G  K   + +A   F ++   G+  ++A+Y  LI GLCK   +E A +L+ E+ +  + PD      L+       SF E   L +R+TEV + D+D  +    Y SL  G  R   + EA      ++G                  + ILPD      ++  L +   +D A+ L ++++  GL+ G   Y
Sbjct:  254 LVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLC------SFSEESEL-SRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMY 477          
BLAST of DY258401 vs. ExPASy Swiss-Prot
Match: PPR79_ARATH (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.417e-16
Identity = 54/187 (28.88%), Postives = 88/187 (47.06%), Query Frame = 1
Query:   55 LMDAYFKAGEPSEALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMD 615
            L+ A  + GE S A  L+DE  +  I+V    +  LI  L K G   E       + + G +P+   Y  LI+G C +N  E A  + DEM+++ + PD  +Y  ++  + + + ++EA  L   M   G   D  +Y  +  GL      +EA V+  EM+ +G  P        L+KL E G ++
Sbjct:  229 LIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLE 415          

HSP 2 Score: 84.3445 bits (207), Expect = 1.696e-15
Identity = 63/206 (30.58%), Postives = 98/206 (47.57%), Query Frame = 1
Query:   67 YFKAGE-PSEALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV-GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGLLSGS*TY 678
            +F  G+ PS AL + DE+     + TV +   L+  L K G + +  +    + +FG +P+   Y  LI G  +  C + A  LFDEM+K+ + P    +  LI G  K    KEAL +K+ M +V GV   ++ Y SL+  L + G L  A  L  E     I  D  +  +L+  L + G  +E   +  EM  +G    + TY
Sbjct:   92 FFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTY 296          

HSP 3 Score: 84.3445 bits (207), Expect = 1.696e-15
Identity = 60/199 (30.15%), Postives = 93/199 (46.73%), Query Frame = 1
Query:   91 EALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDY-FGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGLLSGS*TYAL 684
            +AL L DE++   ++ T VTF  LI GLCK+  V+EA+      L  +G+RP V +Y +LI  LC+   +  A  L DE  +  +  D   Y+ LI   +K     E   +   M+E G   D   Y  L+ G       + A  +  EM+ +G+ PD I    +L   +     +EA  L  +M  RG    + +Y +
Sbjct:  170 DALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRI 368          
BLAST of DY258401 vs. ExPASy Swiss-Prot
Match: PP288_ARATH (Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.417e-16
Identity = 52/169 (30.77%), Postives = 84/169 (49.70%), Query Frame = 1
Query:  148 TFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRG 654
            T+ +L+  L K      A+     + + G+ P+V  YT LIDGL +   +E  +   DEM+K    PD   YT +I GY+      +A  +   MT  G   ++  Y S++ GL   G  +EA  L  EM  RG  P+ ++  +L+  L + G + EA ++  EM+ +G
Sbjct:  291 TYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459          

HSP 2 Score: 82.4185 bits (202), Expect = 6.445e-15
Identity = 65/243 (26.75%), Postives = 99/243 (40.74%), Query Frame = 1
Query:   55 LMDAYFKAGEPSEALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLC-----------------------------------KKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMGRGLLSGS*TY 678
            LM  + + GE      L DE++      T  TF +LI    + GL ++A+  F +   F  RP    Y A+++ L                                    +   ++R   LFDEM +    PD+  Y  L+    K      AL   N M EVG+D  +  YT+L+ GLSR G+L+  +    EM+  G  PD +    ++      G +D+A E+  EM  +G L    TY
Sbjct:  155 LMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTY 397          

HSP 3 Score: 79.337 bits (194), Expect = 5.456e-14
Identity = 46/159 (28.93%), Postives = 79/159 (49.69%), Query Frame = 1
Query:   73 KAGEPSEALVLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 549
            K  +P  AL   + + +  I+ +V+ +  LIDGL + G +     +   +   G RP+V  YT +I G      +++A+ +F EM  +  +P+   Y ++I G      F+EA  L   M   G + +   Y++LV  L + G L EAR +  EM+ +G
Sbjct:  301 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459          
BLAST of DY258401 vs. ExPASy Swiss-Prot
Match: PP395_ARATH (Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.463e-16
Identity = 48/199 (24.12%), Postives = 102/199 (51.26%), Query Frame = 1
Query:   55 LMDAYFKAGEPSEAL-VLQDEVLDSIIEVTVVTFCVLIDGLCKNGLVREAIDYFGRLPDFGLRPNVAVYTALIDGLCKKNCIERARNLFDEMLKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKLYERGNMDEAIELHNEMMG 648
            L  AY + G    A  ++   +L + ++  V T   +++G C+ G + EA+ +F R+ + G+ PN+ V+ +LI G    N ++    + D M +  + PD   ++ L++ +      K    +   M E G+D D++A++ L  G +R G  ++A  + ++M   G+ P+ ++   ++      G M +A++++ +M G
Sbjct:  501 LAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCG 699          
The following BLAST results are available for this feature:
BLAST of DY258401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
PPR2_ARATH1.174e-1627.46Pentatricopeptide repeat-containing protein At1g02... [more]
PP396_ARATH1.174e-1631.28Pentatricopeptide repeat-containing protein At5g24... [more]
PP158_ARATH1.174e-1627.49Pentatricopeptide repeat-containing protein At2g17... [more]
PP161_ARATH1.534e-1630.21Pentatricopeptide repeat-containing protein At2g17... [more]
PPR22_ARATH2.616e-1627.18Pentatricopeptide repeat-containing protein At1g08... [more]
PP392_ARATH2.616e-1629.70Pentatricopeptide repeat-containing protein At5g18... [more]
PP368_ARATH2.616e-1631.58Putative pentatricopeptide repeat-containing prote... [more]
PPR79_ARATH3.417e-1628.88Putative pentatricopeptide repeat-containing prote... [more]
PP288_ARATH3.417e-1630.77Pentatricopeptide repeat-containing protein At3g60... [more]
PP395_ARATH4.463e-1624.12Pentatricopeptide repeat-containing protein At5g21... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1CC07FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258401 ID=DY258401; Name=DY258401; organism=Citrus clementina; type=EST; length=1303bp
GTTAAGTTACACTATGGACAATGATCTTGCTGTTAATGCTGTCTGCTGCG
CCCTCTCATGGATGCTTATTTTAAGGCTGGAGAACCTTCAGAGGCCCTCG
TGCTGCAAGATGAAGTGTTGGACTCCATAATTGAGGTTACAGTTGTGACA
TTTTGTGTATTAATTGATGGTTTGTGCAAAAATGGACTGGTCCGAGAAGC
AATTGATTATTTTGGTAGGTTGCCAGATTTTGGTTTGCGTCCGAATGTTG
CTGTATATACAGCCCTGATTGATGGTCTTTGTAAGAAAAATTGCATTGAA
AGAGCCAGAAATTTGTTTGATGAAATGCTCAAGAGAGATATGATTCCTGA
TACAACTGCGTACACCGCTCTGATAGATGGATACTTGAAGCATGAAAGTT
TTAAGGAAGCTTTGAATTTGAAAAATAGAATGACTGAAGTTGGTGTGGAT
CTTGATCTGAATGCCTACACTTCCTTAGTTTGGGGGCTTTCTCGATGCGG
TCATCTGCAGGAAGCAAGAGTGTTATTTCATGAGATGATTGGCAGGGGGA
TCCTTCCTGATGAGATTCTATGTATCTCTCTATTAAAGAAGCTTTATGAG
CGAGGAAATATGGATGAAGCAATTGAATTGCACAATGAAATGATGGGAAG
GGGTCTGTTGTCTGGCTCCTAAACTTATGCCCTTCCTATACTACAAACCT
GAGAGTATCCAAAATGTTAATTCCCCTGTAATTTGTTGAGGCTTTACTTT
GAGCCAAAAGTAAGGAACCGGTCCCCCTTCCTGATCAAAAAAATTCTTTT
TTGCCCAATTTACAAGTTCCCTTTTTATATCCTGATTCCACTTGCCGGAA
GGTAATGCCTCTTATCCAATCACCCAATTTCCAATGACCGCCCCCCCCAA
ATTCCCTTTTTCTTCCTTAAATTTGAAAACCCTCCCCTCCCCGGCCCCCC
CCAGGACCTTCCTTGAAAACCCCGGGCCGGGGGTTTTGGGATGGGAAAAA
TTGGAATTAAAACCCCCGTCTCCATTCCAACTCCAACACAACGGGGTAAA
ATCTCCCCCCCCCCCCATGGCAAACATTTTTTAACTCTATCTCGGACCCT
TCTCCCTACCCCCCCCTCCGCGGGAACCCACGCCTCTTTTTTTTTCCCCC
CCCGCCCTCTTTTACCAAAAACGCCGGACAAAACAAATCACCCCCCACAC
CCCCCCTCTCTTTTTTTTTCTCATCCACTGGGATTTTTTTCCCTTTTTTT
CACTCCGCTCCTGGCTCCCTATAACACCACCCCTCCTCGTTGATCATCTC
GAG
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