DY258404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_PHATR (ATP synthase subunit beta, chloroplastic OS=Phaeodactylum tricornutum GN=atpB PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.864e-53 Identity = 103/169 (60.95%), Postives = 132/169 (78.11%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVV-DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G V Q+IG V+D++F EG LPPI +A++++ D + ++EV Q +G+ VR ++M T+GL RG ++ G+PI VPVG TLGRI NVIGEP+DE+G++K + LPIHR+APAF E T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 9 GYVTQIIGPVLDIKFSEGNLPPIYSAIKIILDDNTETIVEVQQLLGDNKVRAVSMRSTDGLKRGVEAIDLGTPINVPVGTPTLGRIFNVIGEPVDEQGEVKYDETLPIHRDAPAFTELETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 177
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_CLONN (ATP synthase subunit beta OS=Clostridium novyi (strain NT) GN=atpD PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.353e-53 Identity = 102/170 (60.00%), Postives = 129/170 (75.88%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 ++G+V QVIG V+D++FD LP I A+E+ L+ EV QH+G+ VVRTIAM+ TEGL RG + +NT PI+VPVG LGR+ NV+G+ IDE+G+ K E Y PIHR AP F EQ+ E ++ TGIKV+DL+APYQ+GGKIGLFGGAGVGKTVLI ELINN+AK H Sbjct: 5 NVGRVVQVIGPVIDIKFDSDCLPNIYNAIEIDMGDRILITEVEQHIGDDVVRTIAMESTEGLKRGMKAVNTEKPISVPVGSEILGRLFNVLGKTIDEEGEFKAEEYYPIHRPAPTFEEQSVEPEMFETGIKVIDLIAPYQKGGKIGLFGGAGVGKTVLIQELINNIAKEH 174
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_STIAU (ATP synthase subunit beta OS=Stigmatella aurantiaca GN=atpD PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 8.297e-53 Identity = 106/173 (61.27%), Postives = 130/173 (75.14%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAK 782 ++G++ QV+G V+DV F G LP + TAL+V + S+ L +EVAQH+GE +VR I+MD TEGL RGQ V NTG+PI VPVG+ TLGRI+NVIGEP+DE+G + + PIHR AP FV+Q Q TGIKV+DLL PY RGGKIGLFGGAGVGKTVL+MELI NVAK Sbjct: 7 TVGKITQVLGPVIDVEFPPGGLPEVYTALKVTNTSISAEADNLTIEVAQHLGENMVRCISMDSTEGLARGQAVKNTGAPIQVPVGQGTLGRILNVIGEPVDERGPITSSQTWPIHRPAPTFVDQDVRVQAFETGIKVIDLLGPYTRGGKIGLFGGAGVGKTVLLMELIVNVAK 179
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_FERIS (ATP synthase subunit beta OS=Fervidobacterium islandicum GN=atpD PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 8.297e-53 Identity = 105/174 (60.34%), Postives = 132/174 (75.86%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 K S+G++ ++IG VVDV+F EG LP I AL V++ +L+LEV Q +G+ +VRT+AMD T+GLVRG V NTG PI PVGR LGR+ NVIGEPIDE+G+LK Y PIHR AP+ EQ TE +IL TG+KV+DLLAP+ +GGKIG FGGAGVGKTVL+ME+I N+A H Sbjct: 3 KKSVGKIVRIIGPVVDVKFQEGDLPDIYDALVVINPQTGKKLILEVEQLIGDNIVRTVAMDSTDGLVRGLEVENTGEPIKAPVGRGVLGRMFNVIGEPIDEQGELKDIEYWPIHRPAPSMTEQKTEIEILETGLKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMEMIRNIAIEH 176
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_ALKMQ (ATP synthase subunit beta OS=Alkaliphilus metalliredigens (strain QYMF) GN=atpD PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 8.297e-53 Identity = 101/171 (59.06%), Postives = 132/171 (77.19%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++G++ Q+IGAVVD+RF E +P +L+A+ + + +EVAQH+G+ R +AM T+GLVRG ++TG+PITVPVGR TLGRI NV+GE +DE ++ + +LPIHREAP+F EQ +I TGIKVVDL+APY RGGK+GLFGGAGVGKTVLIMELINN+AK H Sbjct: 4 GNVGKLVQIIGAVVDIRFSSEEIPALLSAITIQGPDGLVTVEVAQHIGDDTARCVAMRSTDGLVRGMEAIDTGAPITVPVGRETLGRIFNVLGEVVDEGKPVEAKMHLPIHREAPSFEEQEAATEIFETGIKVVDLIAPYARGGKVGLFGGAGVGKTVLIMELINNIAKEH 174
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_CLOB8 (ATP synthase subunit beta OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=atpD PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.084e-52 Identity = 101/171 (59.06%), Postives = 130/171 (76.02%), Query Frame = 3 Query: 279 GSIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G +G+V QVIG V+D++FD + LP + A+ + LV EV QH+G+ +VRTIAM TEGL RG ++TG+PI+VPVG LGR+ NV+G+PID+ GD++ + PIHR AP+F +Q+ E ++ TGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLI ELINN+AK H Sbjct: 3 GKMGKVVQVIGPVIDIKFDSDSLPDLYNAIVIKAGDYELVAEVEQHVGDDIVRTIAMSATEGLKRGMDAVDTGAPISVPVGEEVLGRLFNVLGKPIDKCGDIEVKQEYPIHRPAPSFKDQSVEPEMFETGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIQELINNIAKQH 173
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_ORITI (ATP synthase subunit beta OS=Orientia tsutsugamushi (strain Ikeda) GN=atpD PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.848e-52 Identity = 100/180 (55.56%), Postives = 139/180 (77.22%), Query Frame = 3 Query: 252 KITDEFTGKGSIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 K+ ++ + +G+V QV+ AVVDV F + LP IL ALE ++ ++VLEV QH+G+ +VR +AM+ T+GL RG V++TG I VPVG+ LGRI+NV+G+PID+ G +K +++ IH++AP F+ Q+T ++IL+TGIKV+DLL PY GGKIGLFGGAGVGKTVLIME+INNVAKA+ Sbjct: 2 KLKAKYKQQSKVGKVVQVVSAVVDVSFAGKDLPHILNALECTINNEKIVLEVVQHIGDDIVRCLAMNSTDGLFRGAEVIDTGEQIKVPVGKSILGRILNVVGQPIDDLGPIKCDNFSQIHKDAPKFINQSTSRKILITGIKVIDLLTPYISGGKIGLFGGAGVGKTVLIMEIINNVAKAY 181
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_ORITB (ATP synthase subunit beta OS=Orientia tsutsugamushi (strain Boryong) GN=atpD PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.414e-52 Identity = 100/180 (55.56%), Postives = 139/180 (77.22%), Query Frame = 3 Query: 252 KITDEFTGKGSIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 K+ ++ + +G+V QV+ AVVDV F + LP IL ALE ++ ++VLEV QH+G+ +VR +AM+ T+GL RG V++TG I VPVG+ LGRI+NV+G+PID+ G +K +++ IH++AP F+ Q+T ++IL+TGIKV+DLL PY GGKIGLFGGAGVGKTVLIME+INNVAKA+ Sbjct: 2 KLKAKYKQQSKVGKVVQVVSAVVDVSFAGKDLPHILNALECTINNEKIVLEVLQHIGDDIVRCLAMNSTDGLFRGAEVIDTGEQIKVPVGKSILGRILNVVGQPIDDLGPIKCDNFSQIHKDAPKFINQSTSRKILITGIKVIDLLTPYISGGKIGLFGGAGVGKTVLIMEIINNVAKAY 181
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_DESAP (ATP synthase subunit beta OS=Desulforudis audaxviator (strain MP104C) GN=atpD PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.414e-52 Identity = 103/177 (58.19%), Postives = 133/177 (75.14%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-------RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 ++G+V Q+IG VVDVRF G +P I AL + V L LEVAQH+G VVRT+AM T+GLVRG +V++TG+PI VPVGR LGR+++V+G PID GD+K E Y PIHR APA V+Q+T+ + L TG+KV+DLL P+ +GGKIG+FGGAGVGKTV++MELINN+AK H Sbjct: 2 NVGEVVQIIGVVVDVRFPPGQVPEIYNALTIETDKVDAFGRKFNLTLEVAQHLGNNVVRTVAMSTTDGLVRGAKVVDTGAPIKVPVGRPVLGRLIDVLGMPIDGLGDIKAETYYPIHRPAPALVDQSTKVEQLETGLKVIDLLVPFMKGGKIGMFGGAGVGKTVIVMELINNIAKQH 178
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_DESOH (ATP synthase subunit beta OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=atpD PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.118e-52 Identity = 103/175 (58.86%), Postives = 133/175 (76.00%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 +IG+V QV+G VVDV F+ G LP ILTAL + D + LV+EVAQH+G+ VVRTIAMD T+GLVRG V +TG+PIT+PVG +LGR++NV+G+P+D G + E +PIHR AP F EQ T +L TGIKV+DLL P+ RGGK+GLFGGAGVGKTV++ME++NN+A H Sbjct: 4 NIGKVVQVMGPVVDVEFEPGKLPAILTALLITNTVINDEADNLVVEVAQHLGDNVVRTIAMDVTDGLVRGMPVKDTGAPITMPVGAASLGRVLNVVGKPVDGLGPVSREKTMPIHRPAPLFTEQDTSVNVLETGIKVIDLLVPFPRGGKMGLFGGAGVGKTVIMMEMVNNIAMQH 178 The following BLAST results are available for this feature:
BLAST of DY258404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258404 ID=DY258404; Name=DY258404; organism=Citrus clementina; type=EST; length=790bpback to top |