DY258404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_YERP3 (ATP synthase subunit beta OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 98/168 (58.33%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ QVIGAVVDV F + +P + ALEV + +LVLEV Q +G GVVR IAM ++GL RG +V N PI VPVG+ TLGRIMNV+GEPID KG + E IHREAP++ E A+ Q +L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 4 GKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEERWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 171
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_SCHSP (ATP synthase subunit beta, chloroplastic OS=Schisandra sphenanthera GN=atpB PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 98/175 (56.00%), Postives = 125/175 (71.43%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 ++G++ Q+IG V+DV F G +P I +L V V + + V Q +G VR +AM T+GL+RG V++TG+P++VPVG TLGRI NV+GEP+D G + T PIHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 19 TLGRITQIIGPVLDVAFPPGKMPNINNSLXVKGRDTVGQQINVTCXVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGSTLGRIFNVLGEPVDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 193
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_SACD2 (ATP synthase subunit beta OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 96/170 (56.47%), Postives = 123/170 (72.35%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 S G++ Q+IGAV+DV F + +P + AL V D L LEV Q +G+GVVR IAM G+EG+ RG V NTG+PI VPVG TLGRIM+V+G PIDEKG + IHR+AP + E A +++L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELINN+A H Sbjct: 2 SSGRIVQIIGAVIDVEFPRDSVPKVYDALTVADKG--LTLEVQQQLGDGVVRAIAMGGSEGVSRGLAVENTGAPINVPVGTATLGRIMDVLGNPIDEKGPINETERASIHRKAPKYDELAASEELLATGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIATEH 169
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_PROMH (ATP synthase subunit beta OS=Proteus mirabilis (strain HI4320) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 95/168 (56.55%), Postives = 125/168 (74.40%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ QVIGAVVD F + +P + ALEV++ +LVLEV Q +G G+VR IAM ++GL RG +V + G PI VPVG+ TLGRIMNV+G PID KG+++TE IHREAP + E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 4 GKIVQVIGAVVDAEFPQDSVPKVYDALEVMNGKEKLVLEVQQQLGGGIVRCIAMGTSDGLSRGLKVEDLGHPIEVPVGKATLGRIMNVLGTPIDMKGEIETEERWSIHREAPTYEELSNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 171
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_PINKO (ATP synthase subunit beta, chloroplastic OS=Pinus koraiensis GN=atpB PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 98/175 (56.00%), Postives = 123/175 (70.29%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 ++G + Q+IG V+DV F G +P I +L+V +++ EV Q +G VR +AM T+GL RG V++TG+P++VPVG TLGRI NV+GEP+D G + PIHR APAF E T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 17 NVGYIAQIIGPVLDVSFSPGYMPNIYNSLKVQGQGTAGQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMTVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDARITSPIHRTAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 191
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_OLIPU (ATP synthase subunit beta, chloroplastic OS=Olimarabidopsis pumila GN=atpB PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 99/177 (55.93%), Postives = 125/177 (70.62%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 K ++G++ Q+IG V+DV F G +P I AL V + + + EV Q +G VR +AM TEGL RG V++ G+P++VPVG TLGRI NV+GEP+D G + T PIH+ APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 17 KKNLGRISQIIGPVLDVAFPPGKMPNIYNALVVKGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 193
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_NITOC (ATP synthase subunit beta OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 98/170 (57.65%), Postives = 125/170 (73.53%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 S G+ Q+IGAVVDV F E +P + AL + D V L LEV Q +G+GVVRTIAM G++GL RG V NTG+PI+VPVG TLGRIM+V+GEP+DE G + E IHR+APA+ E + ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 2 STGKTVQIIGAVVDVEFPRESIPKVYHALRIDD--VGLTLEVQQQLGDGVVRTIAMGGSDGLRRGMAVTNTGAPISVPVGTKTLGRIMDVLGEPVDEAGPVGEEERWSIHRKAPAYEELSPATELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEH 169
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_LEGPL (ATP synthase subunit beta OS=Legionella pneumophila (strain Lens) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 98/170 (57.65%), Postives = 126/170 (74.12%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 S+G V +VIGAVVDV F + +P + AL++VD LV EV Q +G+GVVRTIAM T+GL RG + NTG PI VPVG+ TLGRIM+V+G P+D+ G + E IHR+AP++ EQA Q++L TGIKV+DLL P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 2 SLGTVVEVIGAVVDVEFPRDSVPKVNDALKLVDSD--LVFEVQQQLGDGVVRTIAMGTTDGLKRGLKAENTGHPIQVPVGKKTLGRIMDVLGRPVDDAGPIDAEETWAIHRKAPSYEEQAGSQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 169
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_LEGPH (ATP synthase subunit beta OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 98/170 (57.65%), Postives = 126/170 (74.12%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 S+G V +VIGAVVDV F + +P + AL++VD LV EV Q +G+GVVRTIAM T+GL RG + NTG PI VPVG+ TLGRIM+V+G P+D+ G + E IHR+AP++ EQA Q++L TGIKV+DLL P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 2 SLGTVVEVIGAVVDVEFPRDSVPKVNDALKLVDSD--LVFEVQQQLGDGVVRTIAMGTTDGLKRGLKAENTGHPIQVPVGKKTLGRIMDVLGRPVDDAGPIDAEETWAIHRKAPSYEEQAGSQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 169
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_LEGPC (ATP synthase subunit beta OS=Legionella pneumophila (strain Corby) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 98/170 (57.65%), Postives = 126/170 (74.12%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 S+G V +VIGAVVDV F + +P + AL++VD LV EV Q +G+GVVRTIAM T+GL RG + NTG PI VPVG+ TLGRIM+V+G P+D+ G + E IHR+AP++ EQA Q++L TGIKV+DLL P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 2 SLGTVVEVIGAVVDVEFPRDSVPKVNDALKLVDSD--LVFEVQQQLGDGVVRTIAMGTTDGLKRGLKAENTGHPIQVPVGKKTLGRIMDVLGRPVDDAGPIDAEETWAIHRKAPSYEEQAGSQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 169 The following BLAST results are available for this feature:
BLAST of DY258404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258404 ID=DY258404; Name=DY258404; organism=Citrus clementina; type=EST; length=790bpback to top |