DY258404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_FRATF (ATP synthase subunit beta OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 100/170 (58.82%), Postives = 124/170 (72.94%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 S G++ QVIGAV+DV F + P + AL VV+ LVLEV Q +G+GVVRTIAM ++GL RG V NT +PI+VPVG TLGRIMNV+GEPIDE G ++ IH+ PA+ E A +IL TGIKVVDL+ P+ +GGK+GLFGGAGVGKTV +MELINN+AK H Sbjct: 2 STGKIIQVIGAVIDVEFARDNTPKVYDALNVVEAG--LVLEVQQQIGDGVVRTIAMGSSDGLRRGMEVKNTNAPISVPVGHGTLGRIMNVLGEPIDEAGPIEYTEKRSIHQAPPAYDELALSTEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEH 169
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_FRAT1 (ATP synthase subunit beta OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 100/170 (58.82%), Postives = 124/170 (72.94%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 S G++ QVIGAV+DV F + P + AL VV+ LVLEV Q +G+GVVRTIAM ++GL RG V NT +PI+VPVG TLGRIMNV+GEPIDE G ++ IH+ PA+ E A +IL TGIKVVDL+ P+ +GGK+GLFGGAGVGKTV +MELINN+AK H Sbjct: 2 STGKIIQVIGAVIDVEFARDNTPKVYDALNVVEAG--LVLEVQQQIGDGVVRTIAMGSSDGLRRGMEVKNTNAPISVPVGHGTLGRIMNVLGEPIDEAGPIEYTEKRSIHQAPPAYDELALSTEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEH 169
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_ENTS8 (ATP synthase subunit beta OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 96/168 (57.14%), Postives = 125/168 (74.40%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRF-DEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ QVIGAVVDV F + +P + ALEV + + RLVLEV Q +G G+VRTIAM ++GL RG V + PI VPVG+ TLGRIMNV+G+PID KGD+ E IHR AP++ E ++ Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 4 GKIVQVIGAVVDVEFPQDAVPKVYDALEVTNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLPVADLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 171
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_CUSRE (ATP synthase subunit beta, plastid OS=Cuscuta reflexa GN=atpB PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 101/175 (57.71%), Postives = 124/175 (70.86%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS---VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 K + G + Q+IG V+DV F G +P I AL V + + EV Q +G VR +AM+ T+GL+RG V++TG+PITVPVG TLGRI NV+GEP+D G + T IHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 17 KKNRGHIVQIIGPVLDVAFPPGKMPNIYNALIVKGRDTEQMNVTCEVQQLLGNNRVRAVAMNDTDGLMRGMEVIDTGTPITVPVGGSTLGRIFNVLGEPVDNLGPVDTNTTFTIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 191
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_CAPBU (ATP synthase subunit beta, chloroplastic OS=Capsella bursa-pastoris GN=atpB PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 99/177 (55.93%), Postives = 124/177 (70.06%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 K ++G++ Q+IG V+DV F G +P I AL V + + + EV Q +G VR +AM TEGL RG V++ G P++VPVG TLGRI NV+GEP+D G + T PIH+ APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 17 KKNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGKPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 193
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_ANOFW (ATP synthase subunit beta OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.790e-47 Identity = 104/177 (58.76%), Postives = 130/177 (73.45%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVR--------LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLP-IHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G+V QV+G VVDV+F++G LP I AL++ H R L LEVA H+G+ VRTIAM T+GLVRG V++TG+PI+VPVG VTLGR+ NV+GEPID ++ + IHR AP F + +T+ +IL TGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINN+A+ H Sbjct: 4 GRVIQVMGPVVDVKFEDGHLPAIYNALKI-KHKARNEKEVDIDLTLEVALHLGDDTVRTIAMSTTDGLVRGMEVIDTGAPISVPVGEVTLGRVFNVLGEPIDLGEEIPADARRDAIHRPAPKFEQLSTQVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEH 179
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_TOLAT (ATP synthase subunit beta OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=atpD PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.338e-47 Identity = 99/172 (57.56%), Postives = 128/172 (74.42%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRF-DEGLPPILTALEVVDH--SVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 S G + QVIGAVVDV+F + +P + AL++V S LV+EV Q +G GVVR IAM ++GL RG V NTG I VPVG TLGRIMNV+GEP+DE+G + E IHREAP++ +Q++ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELINN+AKAH Sbjct: 2 SNGIIVQVIGAVVDVQFPQDAVPKVYDALKIVSEGQSKGLVMEVQQQIGGGVVRCIAMGTSDGLRRGAEVSNTGEAIKVPVGMKTLGRIMNVLGEPVDEQGPIGAEDNWVIHREAPSYEDQSSATELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAH 173
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_PSECV (ATP synthase subunit beta, chloroplastic OS=Pseudogaltonia clavata GN=atpB PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.338e-47 Identity = 99/175 (56.57%), Postives = 123/175 (70.29%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 ++G++ Q+IG V+DV F G +P I AL V V + + EV Q +G VR +AM T+GL RG V++T +P++VPVG TLGRI NV+GEP+D G + T PIHR APAF++ TE I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELI N+AKAH Sbjct: 19 NVGRIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHRSAPAFIQLDTELSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIYNIAKAH 193
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_METCA (ATP synthase subunit beta OS=Methylococcus capsulatus GN=atpD PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.338e-47 Identity = 99/170 (58.24%), Postives = 126/170 (74.12%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 S G++ Q+IGAVVD F E LP I AL V + V LVLEV Q +G+GVVR IAM T+G+ RG V NTG+PI+VPVG TLGRIMNV+G+PIDEKG + + IHR+AP++ +QA ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 2 SSGKIVQIIGAVVDAEFPRESLPKIYDALRVDE--VGLVLEVQQQLGDGVVRCIAMGSTDGVRRGVTVTNTGAPISVPVGTETLGRIMNVLGDPIDEKGPIGEKERWGIHRKAPSYQDQAAANELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 169
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_GOSHI (ATP synthase subunit beta, chloroplastic OS=Gossypium hirsutum GN=atpB PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.338e-47 Identity = 98/177 (55.37%), Postives = 124/177 (70.06%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 K ++G++ Q+IG V+DV F G +P I AL V + + EV Q +G VR +AM T+GL RG V++TG+ ++VPVG TLGRI NV+GEP+D G + T PIH+ APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 17 KENLGRISQIIGPVLDVAFPPGKMPNIYNALVVKGQDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 193 The following BLAST results are available for this feature:
BLAST of DY258404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258404 ID=DY258404; Name=DY258404; organism=Citrus clementina; type=EST; length=790bpback to top |