DY258404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_GOSBA (ATP synthase subunit beta, chloroplastic OS=Gossypium barbadense GN=atpB PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.338e-47 Identity = 98/177 (55.37%), Postives = 124/177 (70.06%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 K ++G++ Q+IG V+DV F G +P I AL V + + EV Q +G VR +AM T+GL RG V++TG+ ++VPVG TLGRI NV+GEP+D G + T PIH+ APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 17 KENLGRISQIIGPVLDVAFPPGKMPNIYNALVVKGQDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGTALSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 193
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_CYAPA (ATP synthase subunit beta, cyanelle OS=Cyanophora paradoxa GN=atpB PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.338e-47 Identity = 100/179 (55.87%), Postives = 125/179 (69.83%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 T K + G V QVIG V+DV F G LP I A+ V + + EV Q +G+ VR ++M T+G++RG V ++G+ I+VPVG TLGRI NV+GEP+DE G + + LPIHR +PAF + T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 5 TSKTNTGYVTQVIGPVLDVSFPNGQLPKIYNAITVKGKNEAGQDITVTCEVQQLLGDNQVRAVSMSTTDGILRGMEVTDSGAAISVPVGTPTLGRIFNVLGEPVDELGAVVCDSTLPIHRPSPAFTQLETKSSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 183
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_COXBU (ATP synthase subunit beta OS=Coxiella burnetii GN=atpD PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.338e-47 Identity = 99/168 (58.93%), Postives = 124/168 (73.81%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDE-GLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G ++IGAVVDV F +P + AL+V +++ L LEV Q +G+GVVRTIAM TEGL R V NT PI VPVG+ TLGRIMNV+GEPIDE G + ++ LPIHR AP+F+EQ+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 7 GTTIEIIGAVVDVEFPRHAVPKVYDALQVDENN--LTLEVQQQLGDGVVRTIAMGSTEGLKRDIAVKNTEKPIEVPVGKETLGRIMNVLGEPIDELGPINSKEKLPIHRPAPSFIEQSGATELLETGIKVVDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 172
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_COXBR (ATP synthase subunit beta OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=atpD PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.338e-47 Identity = 99/168 (58.93%), Postives = 124/168 (73.81%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDE-GLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G ++IGAVVDV F +P + AL+V +++ L LEV Q +G+GVVRTIAM TEGL R V NT PI VPVG+ TLGRIMNV+GEPIDE G + ++ LPIHR AP+F+EQ+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 7 GTTIEIIGAVVDVEFPRHAVPKVYDALQVDENN--LTLEVQQQLGDGVVRTIAMGSTEGLKRDIAVKNTEKPIEVPVGKETLGRIMNVLGEPIDELGPINSKEKLPIHRPAPSFIEQSGTTELLETGIKVVDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 172
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_COXBN (ATP synthase subunit beta OS=Coxiella burnetii (strain Dugway 5J108-111) GN=atpD PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.338e-47 Identity = 99/168 (58.93%), Postives = 124/168 (73.81%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDE-GLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G ++IGAVVDV F +P + AL+V +++ L LEV Q +G+GVVRTIAM TEGL R V NT PI VPVG+ TLGRIMNV+GEPIDE G + ++ LPIHR AP+F+EQ+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 7 GTTIEIIGAVVDVEFPRHAVPKVYDALQVDENN--LTLEVQQQLGDGVVRTIAMGSTEGLKRDIAVKNTEKPIEVPVGKETLGRIMNVLGEPIDELGPINSKEKLPIHRPAPSFIEQSGATELLETGIKVVDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 172
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_CHAVU (ATP synthase subunit beta, chloroplastic OS=Chara vulgaris GN=atpB PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.338e-47 Identity = 98/173 (56.65%), Postives = 123/173 (71.10%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ Q+IG V+D+ F G +P I L V + + + EV Q +G+ VR +AM T+GL+RG V++TGSP++VPVG TLGRI NV+GEP+D G + T PIHR APAF + T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 19 GKITQIIGPVMDISFLPGQMPNIYNCLTVKGKNASGDFIDVTCEVQQLLGDNKVRAVAMSATDGLMRGMEVIDTGSPLSVPVGETTLGRIFNVLGEPVDNLGPVDTSITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 191
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_BUCAP (ATP synthase subunit beta OS=Buchnera aphidicola subsp. Schizaphis graminum GN=atpD PE=3 SV=2) HSP 1 Score: 189.119 bits (479), Expect = 2.338e-47 Identity = 98/173 (56.65%), Postives = 126/173 (72.83%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-----HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 G++ Q+IGAVVDV FD+ +P I ALEV + ++L+LEV Q +G G+VRTIAM T GL RG V++ G I VPVG+ TLGRI+NV+G+ ID KG LK Y IHR AP++ EQA+ Q+IL TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 5 GKIIQIIGAVVDVEFDQNSVPKIYNALEVKNKKIQLILEVQQQLGAGIVRTIAMGSTNGLKRGLIVIDLGHYIKVPVGQATLGRIINVLGKTIDNKGPLKNLDNSKLEYWEIHRSAPSYQEQASSQEILETGIKVIDLICPFSKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 177
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_AMOA5 (ATP synthase subunit beta OS=Amoebophilus asiaticus (strain 5a2) GN=atpD PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.338e-47 Identity = 99/172 (57.56%), Postives = 126/172 (73.26%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVVD-HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 +IG + Q+IG ++DV F+ LP IL ALEV ++VLE QH+G+ VRTIAM TEGLVRG +V++TG+ I +PVG GR+ NVIGE ID KT+ LPIHR AP F + +T ++L TGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELI+N+AK++ Sbjct: 3 NIGAITQIIGPIIDVSFENSGKLPAILNALEVTKADGQKIVLECQQHLGQYAVRTIAMHETEGLVRGMKVVDTGAAIQMPVGEAIRGRLFNVIGEAIDGLPQPKTQQKLPIHRPAPKFKDISTATEVLYTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELIDNIAKSY 174
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB_ACEWO (ATP synthase subunit beta, sodium ion specific OS=Acetobacterium woodii GN=atpD PE=1 SV=2) HSP 1 Score: 189.119 bits (479), Expect = 2.338e-47 Identity = 100/171 (58.48%), Postives = 125/171 (73.10%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKG-DLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 +IG+V QVIG VVDV+F + LP + A+ + + LV+EVAQ +G+ +VR IAMD T+GL+R Q ++TGS I VPVG+ TLGR+ NV+GEPID K D K PIHR P+F EQ T+ ++ TGIKVVDL+ PY RGGKIGLFGGAGVGKTVLI ELINN+A H Sbjct: 4 NIGKVVQVIGPVVDVKFQKDKLPKLNNAVNIELNGHTLVIEVAQQLGDDIVRCIAMDSTDGLMRNQEAVDTGSAIQVPVGKATLGRMFNVLGEPIDGKPFDTKDVVMHPIHRHPPSFEEQQTQPEMFETGIKVVDLICPYVRGGKIGLFGGAGVGKTVLIQELINNIATQH 174
BLAST of DY258404 vs. ExPASy Swiss-Prot
Match: ATPB1_RHOFD (ATP synthase subunit beta 1 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=atpD1 PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.338e-47 Identity = 98/177 (55.37%), Postives = 128/177 (72.32%), Query Frame = 3 Query: 261 DEFTGKGSIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 788 D T G++ Q IGAVVDV F + +P I AL++ + L LEV Q +G+G+VRTIA+ ++GL RG V NT +PI VPVG TLGRIM+V+G PIDE+G + TE Y IHR+AP + E + Q++L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELINN+AKAH Sbjct: 4 DTQTNTAVQGKIVQCIGAVVDVEFPRDQMPKIYDALKLEGSA--LTLEVQQQLGDGIVRTIALGSSDGLRRGLMVSNTANPIMVPVGTATLGRIMDVLGTPIDERGPVSTEKYASIHRKAPTYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAH 178 The following BLAST results are available for this feature:
BLAST of DY258404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258404 ID=DY258404; Name=DY258404; organism=Citrus clementina; type=EST; length=790bpback to top |