DY258459

Overview
NameDY258459
Unique NameDY258459
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_HELPJ (Adenylate kinase OS=Helicobacter pylori J99 GN=adk PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.151e-11
Identity = 37/138 (26.81%), Postives = 73/138 (52.90%), Query Frame = 2
Query:   17 SENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVL----FFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 418
            +E G +I+    +G++VP E+ ++ +  A++ S     LIDG+PR+ E   A +     + E +L      + SE   + R+L R++G  DDN      R +VFL+  + +  +Y+AK   + I+  + + E+ + ++
Sbjct:   47 TERGLLIEKFTSQGELVPLEIVVETILSAIKSSSKGIILIDGYPRSVEQMQALDKELNAQNEVILKSVIEVEVSENTAKERVLGRSRG-ADDNERVFHNRMRVFLDPLVEIQNFYKAKHLHKIINGERSIEEIVNEMQ 183          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_ECOL6 (Adenylate kinase OS=Escherichia coli O6 GN=adk PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.503e-11
Identity = 51/175 (29.14%), Postives = 82/175 (46.86%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEVFDAVKAV 424
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV  A++ +
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRAALEKI 212          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_ECOL5 (Adenylate kinase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=adk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.503e-11
Identity = 51/175 (29.14%), Postives = 82/175 (46.86%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEVFDAVKAV 424
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV  A++ +
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRAALEKI 212          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_ECO81 (Adenylate kinase OS=Escherichia coli O81 (strain ED1a) GN=adk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.503e-11
Identity = 51/175 (29.14%), Postives = 82/175 (46.86%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEVFDAVKAV 424
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV  A++ +
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRAALEKI 212          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_ECO7I (Adenylate kinase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=adk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.503e-11
Identity = 51/175 (29.14%), Postives = 82/175 (46.86%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEVFDAVKAV 424
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV  A++ +
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRAALEKI 212          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_ECO27 (Adenylate kinase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=adk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.503e-11
Identity = 51/175 (29.14%), Postives = 82/175 (46.86%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEVFDAVKAV 424
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV  A++ +
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRAALEKI 212          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_STAES (Adenylate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=adk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 46/170 (27.06%), Postives = 84/170 (49.41%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKIEPEF--VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 415
            IK  ++ G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  ++  +  + +++++ E   V+  +  EEE+  R+  R                                REDDN ET+  R  V ++ S P+++YY  KG ++ ID +K + EV + V
Sbjct:   39 IKDETDLGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIDQAESLSQIMSELDREIDAVINIEVPEEELMNRLTGRRICEKCGTTYHLVFNPPKVDGICDIDGGKLYQREDDNPETVSNRLSVNVKQSKPILEYYNNKGVLKNIDGSKDIDEVTNDV 208          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_STAEQ (Adenylate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 46/170 (27.06%), Postives = 84/170 (49.41%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKIEPEF--VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 415
            IK  ++ G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  ++  +  + +++++ E   V+  +  EEE+  R+  R                                REDDN ET+  R  V ++ S P+++YY  KG ++ ID +K + EV + V
Sbjct:   39 IKDETDLGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIDQAESLSQIMSELDREIDAVINIEVPEEELMNRLTGRRICEKCGTTYHLVFNPPKVDGICDIDGGKLYQREDDNPETVSNRLSVNVKQSKPILEYYNNKGVLKNIDGSKDIDEVTNDV 208          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_STAAW (Adenylate kinase OS=Staphylococcus aureus (strain MW2) GN=adk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 48/169 (28.40%), Postives = 79/169 (46.75%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 403
            IK  +E G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  E     EA+  I  E       V+  +  EEE+  R+  R                                REDDN ET+  R  V ++ S P++ +Y+ KG ++ ID +K +++V
Sbjct:   39 IKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQA---EALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDV 204          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_STAAS (Adenylate kinase OS=Staphylococcus aureus (strain MSSA476) GN=adk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 48/169 (28.40%), Postives = 79/169 (46.75%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 403
            IK  +E G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  E     EA+  I  E       V+  +  EEE+  R+  R                                REDDN ET+  R  V ++ S P++ +Y+ KG ++ ID +K +++V
Sbjct:   39 IKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQA---EALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDV 204          
The following BLAST results are available for this feature:
BLAST of DY258459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
KAD_HELPJ1.151e-1126.81Adenylate kinase OS=Helicobacter pylori J99 GN=adk... [more]
KAD_ECOL61.503e-1129.14Adenylate kinase OS=Escherichia coli O6 GN=adk PE=... [more]
KAD_ECOL51.503e-1129.14Adenylate kinase OS=Escherichia coli O6:K15:H31 (s... [more]
KAD_ECO811.503e-1129.14Adenylate kinase OS=Escherichia coli O81 (strain E... [more]
KAD_ECO7I1.503e-1129.14Adenylate kinase OS=Escherichia coli O7:K1 (strain... [more]
KAD_ECO271.503e-1129.14Adenylate kinase OS=Escherichia coli O127:H6 (stra... [more]
KAD_STAES1.963e-1127.06Adenylate kinase OS=Staphylococcus epidermidis (st... [more]
KAD_STAEQ1.963e-1127.06Adenylate kinase OS=Staphylococcus epidermidis (st... [more]
KAD_STAAW1.963e-1128.40Adenylate kinase OS=Staphylococcus aureus (strain ... [more]
KAD_STAAS1.963e-1128.40Adenylate kinase OS=Staphylococcus aureus (strain ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1DE07FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258459 ID=DY258459; Name=DY258459; organism=Citrus clementina; type=EST; length=761bp
CGAAATCAAATCTGGCTCTGAAAATGGAACCATGATTCAGAACATGATTA
AAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAA
GCAATGGAGGAAAGTGGAAATGATAAATTTCTCATCGATGGTTTTCCCAG
GAACGAGGAAAATCGTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAG
AATTCGTTCTGTTTTTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATT
TTGAATAGGAATCAGGGAAGAGAAGATGATAACGTTGAGACAATTAGGAA
GCGGTTTAAGGTTTTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATG
AAGCTAAGGGTAAAGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAG
GTTTTTGATGCTGTTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGTAAA
GCACTATAGTTGTACCATCCTGTAGGTGGTTTATTTGGGACAGAACATGT
TGGAAAGATTTGGAGGCAGAAAGGCTGCTGCTTAGGTCTTCTCTGTCCAG
AGTATCAGATTTAATATCAAGGTGGTGGTATTGTTGTTGGCTGCTGCCTA
TTGTTGTACTTTATTATTATGAGGTTATTATGTCACATGTTTTACTAGAA
TGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGTTTGCCTATG
TATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTTATAATAACAG
CATTGATGCTT
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