DY258459

Overview
NameDY258459
Unique NameDY258459
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_SHIDS (Adenylate kinase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=adk PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.373e-11
Identity = 50/168 (29.76%), Postives = 78/168 (46.43%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEV 403
            +KSGSE G   ++++  GK+V  E+ I L++ +  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKGRIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEV 205          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_ECO45 (Adenylate kinase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=adk PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.373e-11
Identity = 51/175 (29.14%), Postives = 81/175 (46.29%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEVFDAVKAV 424
            +KSGSE G   ++++  GK+V  E+ I L+ ++  +E     FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV  A++ +
Sbjct:   39 VKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRYGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRAALEKI 212          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_CORJK (Adenylate kinase OS=Corynebacterium jeikeium (strain K411) GN=adk PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.373e-11
Identity = 44/137 (32.12%), Postives = 74/137 (54.01%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAFEAVTKIEP---EFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 403
            I  G++ G   Q  +  GK+VP+ VT  +++  + +E   D FL+DGFPR  E     E + + +    + V+ +  SE+ +  R+L R  GR DDN +TIR R +V+   + P++ +Y  K  +  IDA   V ++
Sbjct:   39 ISQGTDLGKQAQEYMDAGKLVPTSVTADMVRDRLNQEDAADGFLLDGFPRTIEQAELLEKMLQDDGHSLDAVINYVVSEDVVVDRMLAR--GRNDDNEDTIRTRLEVYRNETAPLIDHY--KDVLLNIDAEGTVEDI 171          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_CORDI (Adenylate kinase OS=Corynebacterium diphtheriae GN=adk PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.373e-11
Identity = 41/137 (29.93%), Postives = 79/137 (57.66%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYY-------EAKGKVRKIDA 382
            I  G+  G   ++ I  GK+VP++VT ++++  +++   +  FL+DGFPR  E     + + K   +E   V+ ++ +E+ +  R+L R  GR DDN +TIR R +V+ + + P++++Y       +A+G +  I+A
Sbjct:   39 IGEGTPLGKEAKSYIDAGKLVPTDVTARMVKARLQKDDAEVGFLLDGFPRTVEQAEILKEMLKGFGVELNGVINYEVAEDVVVERMLAR--GRADDNEDTIRTRLQVYRDETAPLIRHYGDDIITIKAEGSIEDINA 173          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_PROM2 (Adenylate kinase OS=Prochlorococcus marinus (strain MIT 9215) GN=adk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.712e-11
Identity = 39/142 (27.46%), Postives = 83/142 (58.45%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRN-EENRAAFEAVTKIEP--EFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 418
            EI   +  G  +++++  G++V  E+ +K++++ + +  N  +++DG+PRN  +  +  E +T+I    E V + D  EE + +R+L R  GR+DD  +TIR R  ++ +++ P++QY++    +  IDA + +  +   +K
Sbjct:   40 EIDMNTILGIQVKDIMNRGELVSDELVLKIVRQNLVKD-NKGWILDGYPRNLSQANSLNEVLTEINQPLEVVFYLDIPEEVLIKRLLLR--GRKDDTEKTIRTRVDIYKKTTEPLIQYFKDLSLLEYIDADRDLKTISSDIK 178          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_PROMP (Adenylate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=adk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 36/130 (27.69%), Postives = 79/130 (60.77%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRN--EENRAAFEAVTKIEP-EFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDA 382
            EI   ++ G  +++++  G++V  ++ +++++K +++  N  +++DG+PRN  + N      +   +P E V + D  +E + +R+L R  GR+DDN +TI+ R K++ E++ P+++YY+    +  I A
Sbjct:   40 EIDLDTDLGKQVKDIMNRGELVSDQLVLEIVKKNLDKDNNG-WILDGYPRNLSQVNSLNDVLININQPLEIVFYLDIPDEVLIKRLLIR--GRKDDNEKTIKTRLKIYKETTEPLIEYYKDLALLENIKA 166          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_PROM5 (Adenylate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=adk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 38/142 (26.76%), Postives = 83/142 (58.45%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRN-EENRAAFEAVTKIEP--EFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 418
            EI   +  G  +++++ +G++V  ++ ++++ K + +  N  +++DG+PRN  +  +  E +  I    E V + D  +E + +R+L R  GR+DDN ETI+ R K++ E++ P+++YY+    +  I+A   +  + + +K
Sbjct:   40 EIDLDTYLGKQVKDIMNKGELVSDQLVLEIVNKNLSKD-NKGWILDGYPRNLSQVNSLNEVLMNINQPLEIVFYLDVPDEVLIKRLLLR--GRKDDNEETIKTRLKIYKETTEPLIEYYKNLSLLEYINADGDLKTISNDIK 178          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_NATPD (Adenylate kinase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=adk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 44/160 (27.50%), Postives = 79/160 (49.38%), Query Frame = 2
Query:   17 SENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQG-------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKA 421
            +E+GT  +  ++ G++VP  V  +++Q A++E+  D F++DG+PRN         +T ++   V   D   +E+  R+  R                            R+DD  ET+ +R  VF E++ PV+ YYE +G++ +ID      EV+D ++A
Sbjct:   46 TEHGTP-REFMEAGELVPDPVVNEIVQAAIDEA--DGFVLDGYPRNLSQAEYLSDITDVD--VVALLDVGRDELVDRLTGRRMDPETGDIYHTEFNMPDDEEVRERLVQRDDDTEETVNERLDVFDENTQPVIDYYEDEGELVRIDGEASPDEVWDDLQA 200          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_METPB (Adenylate kinase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=adk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 45/159 (28.30%), Postives = 75/159 (47.17%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQG--------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPKDEK 445
            + +G+  G   +++++ G +VP  V + ++   +EE+   D F++DGFPR  E   A +A+     I  + V+ F   E  +  RI  R +         R+DD  E  + R   +   + P+  YY   G +RKID  KP+ EV   V  +     EK
Sbjct:   39 VAAGTPVGLEAKSIMESGGLVPDAVVVGIVADRIEEADARDGFILDGFPRTVEQAKALDAMLAEKGIALDAVVEFVVDENALVGRIAKRAEETAARGQPVRKDDTPEVFKTRLDAYKRQTAPLSDYYAGTGLLRKIDGMKPIDEVTGDVTGLLDGFREK 197          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_FLAPJ (Adenylate kinase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=adk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 43/140 (30.71%), Postives = 76/140 (54.29%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAA---FEAVTKIEPEFVLFFDCSEEEMERRILNRNQ--GREDD-NVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 403
            IK+ +E G + +  + +G +VP  VTIK+L+  ++++ + K FL DGFPR     AA   F A    E    +  +  +E + +R+L R +  GR DD + E IR R++ + E + P++ YY+   K   ++    + E+
Sbjct:   40 IKNETELGKLAKTFMDKGDLVPDAVTIKMLESEVDKNQHSKGFLFDGFPRTLAQAAALDTFLASKDQEVTATIALEADDEILVQRLLERGKTSGRVDDQDEEKIRNRYQEYNEKTAPLMSYYKNNKKFHAVNGIGTIQEI 179          
The following BLAST results are available for this feature:
BLAST of DY258459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
KAD_SHIDS4.373e-1129.76Adenylate kinase OS=Shigella dysenteriae serotype ... [more]
KAD_ECO454.373e-1129.14Adenylate kinase OS=Escherichia coli O45:K1 (strai... [more]
KAD_CORJK4.373e-1132.12Adenylate kinase OS=Corynebacterium jeikeium (stra... [more]
KAD_CORDI4.373e-1129.93Adenylate kinase OS=Corynebacterium diphtheriae GN... [more]
KAD_PROM25.712e-1127.46Adenylate kinase OS=Prochlorococcus marinus (strai... [more]
KAD_PROMP7.460e-1127.69Adenylate kinase OS=Prochlorococcus marinus subsp.... [more]
KAD_PROM57.460e-1126.76Adenylate kinase OS=Prochlorococcus marinus (strai... [more]
KAD_NATPD7.460e-1127.50Adenylate kinase OS=Natronomonas pharaonis (strain... [more]
KAD_METPB7.460e-1128.30Adenylate kinase OS=Methylobacterium populi (strai... [more]
KAD_FLAPJ7.460e-1130.71Adenylate kinase OS=Flavobacterium psychrophilum (... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI1DE07FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258459 ID=DY258459; Name=DY258459; organism=Citrus clementina; type=EST; length=761bp
CGAAATCAAATCTGGCTCTGAAAATGGAACCATGATTCAGAACATGATTA
AAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAA
GCAATGGAGGAAAGTGGAAATGATAAATTTCTCATCGATGGTTTTCCCAG
GAACGAGGAAAATCGTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAG
AATTCGTTCTGTTTTTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATT
TTGAATAGGAATCAGGGAAGAGAAGATGATAACGTTGAGACAATTAGGAA
GCGGTTTAAGGTTTTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATG
AAGCTAAGGGTAAAGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAG
GTTTTTGATGCTGTTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGTAAA
GCACTATAGTTGTACCATCCTGTAGGTGGTTTATTTGGGACAGAACATGT
TGGAAAGATTTGGAGGCAGAAAGGCTGCTGCTTAGGTCTTCTCTGTCCAG
AGTATCAGATTTAATATCAAGGTGGTGGTATTGTTGTTGGCTGCTGCCTA
TTGTTGTACTTTATTATTATGAGGTTATTATGTCACATGTTTTACTAGAA
TGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGTTTGCCTATG
TATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTTATAATAACAG
CATTGATGCTT
back to top