DY258459

Overview
NameDY258459
Unique NameDY258459
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_DEHSB (Adenylate kinase OS=Dehalococcoides sp. (strain BAV1) GN=adk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 43/165 (26.06%), Postives = 82/165 (49.70%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGN-DKFLIDGFPRNEENRAAFEAVTKIEPEF---VLFFDCSEEEMERRI------------------------LNRNQG----REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 403
            I+ G E G  +++ ++ G++VP E+TI ++ K +    +    ++DGFPR+     A +     + +    V++ +  E+E+ RR+                         +R QG    R DD  ET+++R KV+   + P+++YY +KGK+ +ID    ++EV
Sbjct:   40 IECGDELGDTVKSYMERGELVPDEITISVVLKHLAGLKDVTGIILDGFPRSLRQAEALDEALVQQGQGIGRVIYINVPEDELVRRLSGRWVCRSCQSPYQSGCAEVTKGKCSRCQGELYQRPDDTPETVKERLKVYFSKTAPLIEYYRSKGKLSEIDGMAEISEV 204          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_CLAMS (Adenylate kinase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=adk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 43/150 (28.67%), Postives = 74/150 (49.33%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPK 436
            IK  +E G  +Q ++  G  VP E+T +L+  +  EE     FL+DG+PR     A  E + +    E + V+     E+E+  R+  R   QGR DD  + IR R +V++  + P++  Y   G + ++D    V EV + ++     +
Sbjct:   40 IKDRTELGQQVQALVDAGNYVPDELTNRLVTVRLQEEDAQAGFLLDGYPRTLAQVAYLEELLQGWGQELDAVIQLVADEDEVVARLTRRAAEQGRADDGEDEIRHRQEVYVRETSPLIDVYREHGLLVEVDGLGEVDEVAERIRTALAAR 189          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_CORGL (Adenylate kinase OS=Corynebacterium glutamicum GN=adk PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.743e-11
Identity = 45/137 (32.85%), Postives = 74/137 (54.01%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDKFLIDGFPRNEENRAAFEAVTKIEPEF---VLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYY-------EAKGKVRKIDA 382
            I  G+  G   +  I  GK+VP++VT +++   + ES   + FL+DGFPR  E       +     +    V+ +  SE+ +  R+L+R  GR DDN ETIR R  V+ + + P++ +Y       EA+G+V +I+A
Sbjct:   39 IGEGTPLGIEAKQYIDAGKLVPTDVTARMVASRLAESDAAEGFLLDGFPRTVEQADILANLLSEAGQTLDGVVNYQVSEDVVVERMLSR--GRADDNEETIRTRLGVYRDETAPLIDHYGDKIINIEAEGEVEEINA 173          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_CORGB (Adenylate kinase OS=Corynebacterium glutamicum (strain R) GN=adk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.743e-11
Identity = 45/137 (32.85%), Postives = 74/137 (54.01%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDKFLIDGFPRNEENRAAFEAVTKIEPEF---VLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYY-------EAKGKVRKIDA 382
            I  G+  G   +  I  GK+VP++VT +++   + ES   + FL+DGFPR  E       +     +    V+ +  SE+ +  R+L+R  GR DDN ETIR R  V+ + + P++ +Y       EA+G+V +I+A
Sbjct:   39 IGEGTPLGIEAKQYIDAGKLVPTDVTARMVASRLAESDAAEGFLLDGFPRTVEQADILANLLSEAGQTLDGVVNYQVSEDVVVERMLSR--GRADDNEETIRTRLGVYRDETAPLIDHYGDKIINIEAEGEVEEINA 173          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD_ALKOO (Adenylate kinase OS=Alkaliphilus oremlandii (strain OhILAs) GN=adk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.743e-11
Identity = 45/167 (26.95%), Postives = 77/167 (46.11%), Query Frame = 2
Query:    5 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAME-ESGNDKFLIDGFPRNEENRAAFEAVT---KIEPEFVLFFDCSEEEMERRILNRNQGRE-----------------------------DDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF 406
            IK G+E G   ++ + +G +VP EV +++++  ++ E   + FL+DGFPR      A +       I  + V+     +E +  R + R   RE                             DDN ET+ +R +V+L  + P+V+YY ++ K+  ID  K + EVF
Sbjct:   39 IKQGTELGKKAKSYMDQGLLVPDEVVVEIVEDRLKKEDCENGFLLDGFPRTVVQAEALDKALVDMNISLDKVINIQVDKERLIERAVGRRICRECGATFHVQYNPSTKGALCDQCGGELYQRDDDNEETVTRRIEVYLSETTPLVEYYSSQNKLVTIDGDKKINEVF 205          
BLAST of DY258459 vs. ExPASy Swiss-Prot
Match: KAD2_DROER (Adenylate kinase 2, mitochondrial OS=Drosophila erecta GN=Adk2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.743e-11
Identity = 47/178 (26.40%), Postives = 82/178 (46.07%), Query Frame = 2
Query:    2 EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVT---KIEPEFVLFFDCSEEEMERRILNR--NQG---------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPK 436
            EI SGS+ G  ++ ++  GK+V  E+ + ++   +++    + FL+DGFPR        + +    K   + V+ F   +  + RRI  R  +Q                            R DDN E ++KR + + + + P+V YY  +G   K+DAAK  ++VF A+  +F  K
Sbjct:   56 EISSGSKLGAELKKVMDAGKLVSDELVVDMIDSNLDKPECKNGFLLDGFPRTVVQAEKLDTLLDKRKTNLDAVIEFAIDDNLLVRRITGRLIHQASGRSYHEEFAPPKKSMTDDVTGEPLIRRSDDNAEALKKRLEAYHKQTRPLVDYYGLRGLHFKVDAAKKSSDVFSAIDNIFQRK 233          
The following BLAST results are available for this feature:
BLAST of DY258459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
KAD_DEHSB7.460e-1126.06Adenylate kinase OS=Dehalococcoides sp. (strain BA... [more]
KAD_CLAMS7.460e-1128.67Adenylate kinase OS=Clavibacter michiganensis subs... [more]
KAD_CORGL9.743e-1132.85Adenylate kinase OS=Corynebacterium glutamicum GN=... [more]
KAD_CORGB9.743e-1132.85Adenylate kinase OS=Corynebacterium glutamicum (st... [more]
KAD_ALKOO9.743e-1126.95Adenylate kinase OS=Alkaliphilus oremlandii (strai... [more]
KAD2_DROER9.743e-1126.40Adenylate kinase 2, mitochondrial OS=Drosophila er... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1DE07FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258459 ID=DY258459; Name=DY258459; organism=Citrus clementina; type=EST; length=761bp
CGAAATCAAATCTGGCTCTGAAAATGGAACCATGATTCAGAACATGATTA
AAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAA
GCAATGGAGGAAAGTGGAAATGATAAATTTCTCATCGATGGTTTTCCCAG
GAACGAGGAAAATCGTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAG
AATTCGTTCTGTTTTTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATT
TTGAATAGGAATCAGGGAAGAGAAGATGATAACGTTGAGACAATTAGGAA
GCGGTTTAAGGTTTTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATG
AAGCTAAGGGTAAAGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAGAG
GTTTTTGATGCTGTTAAAGCTGTTTTTACCCCAAAAGATGAGAAGGTAAA
GCACTATAGTTGTACCATCCTGTAGGTGGTTTATTTGGGACAGAACATGT
TGGAAAGATTTGGAGGCAGAAAGGCTGCTGCTTAGGTCTTCTCTGTCCAG
AGTATCAGATTTAATATCAAGGTGGTGGTATTGTTGTTGGCTGCTGCCTA
TTGTTGTACTTTATTATTATGAGGTTATTATGTCACATGTTTTACTAGAA
TGTCATAGAAGTTCATAGTGTATCATGATATTTATTCTTGTTTGCCTATG
TATTCTTGTTATTGAGACTGTAATAGCAAGATCAAGAGTTATAATAACAG
CATTGATGCTT
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