DY258464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 3.076e-33 Identity = 71/115 (61.74%), Postives = 89/115 (77.39%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIALAPKAMEKSKIR 422 VSMD APYLRK++L Y +Y ELS+AL MFS FT+G+ G E + ++E KL DL++ +YV +YEDKDGDWMLVGDVP MF+D+CKRL++MKGSDAI LAP+AMEK K R Sbjct: 115 VSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGM-IDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSR 228
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA17_ORYSJ (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.994e-32 Identity = 78/116 (67.24%), Postives = 89/116 (76.72%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIALAPKAMEKSKIRN 425 VSMD APYLRKV+L TY NY +LS+ALEKMF FT G+ G LSES+ KD EYVLTYEDKDGDWMLVGDVP EMF +SC+RL+IMKGSDAI LAP+A++KSK RN Sbjct: 156 VSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTGKDG---------LSESR-KD----GEYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRIMKGSDAIGLAPRAVDKSKNRN 257
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA19_ORYSJ (Auxin-responsive protein IAA19 OS=Oryza sativa subsp. japonica GN=IAA19 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 4.442e-32 Identity = 64/112 (57.14%), Postives = 86/112 (76.79%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIALAPKAMEKS 413 VSMD APYLRKV+L TY++Y +LS ALEKMFSCF G+ SH+ R+ L++ D L EYVLTYEDKD DWMLVGD+P ++F SC++L+IM+GSDA +AP+++E++ Sbjct: 166 VSMDGAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRSLEQT 277
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSJ (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. japonica GN=IAA5 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 3.761e-31 Identity = 64/112 (57.14%), Postives = 83/112 (74.11%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIALAPKAMEKS 413 VSMD APYLRKV+L Y++Y +LS ALEKMFSCF GQ G ++ R+ L+ D L EYVLTYEDKD DWMLVGD+P ++F C++LKIM+GSDA +AP+++E+S Sbjct: 156 VSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQS 267
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSI (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. indica GN=IAA5 PE=2 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 3.761e-31 Identity = 64/112 (57.14%), Postives = 83/112 (74.11%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIALAPKAMEKS 413 VSMD APYLRKV+L Y++Y +LS ALEKMFSCF GQ G ++ R+ L+ D L EYVLTYEDKD DWMLVGD+P ++F C++LKIM+GSDA +AP+++E+S Sbjct: 157 VSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQS 268
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA3_ORYSJ (Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica GN=IAA3 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.184e-30 Identity = 73/116 (62.93%), Postives = 82/116 (70.69%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIALAPKAMEKSKIRN 425 VSMD APYLRKV+L TY NY ++S LEKMF F+ G+ G+ KD EYVLTYEDKDGDWMLVGDVP EMF DSC+RL+IMKGSDAI LAP+A EKSK RN Sbjct: 163 VSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAENQ-----------KD----GEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAPRAGEKSKNRN 263
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSJ (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica GN=IAA13 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 9.586e-27 Identity = 65/113 (57.52%), Postives = 80/113 (70.80%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIALAPKAMEKSK 416 VSMD APYLRKV+L Y +Y +LS AL+KMF FT A G M + ++GS+ V TYEDKDGDWMLVGDVP +MF++SCKRL+IMKGS+AI LAP+A +K K Sbjct: 136 VSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFT--------ATGNNM-------NEVNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDKYK 233
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSI (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica GN=IAA13 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 9.586e-27 Identity = 65/113 (57.52%), Postives = 80/113 (70.80%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIALAPKAMEKSK 416 VSMD APYLRKV+L Y +Y +LS AL+KMF FT A G M + ++GS+ V TYEDKDGDWMLVGDVP +MF++SCKRL+IMKGS+AI LAP+A +K K Sbjct: 136 VSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFT--------ATGNNM-------NEVNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDKYK 233
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA23_ORYSJ (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 2.610e-24 Identity = 60/131 (45.80%), Postives = 81/131 (61.83%), Query Frame = 3 Query: 9 WQPHQ*FLRNYTVXXXXXXXXXXVSMDRAPYLRKVNLTTYTNYGELSSALEKMF-SCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIALAPK 398 W P + + RN V++D APYLRKV+L + Y L AL MF SC + G + G +KL DL+ G+EYV TYEDKDGDWMLVGDVP +MF++SCKR+++MK S+A+ L+P+ Sbjct: 65 WPPVRAYRRNALREDSARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAVRGGGGGDGEG------TKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNLSPR 189
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA15_ORYSJ (Auxin-responsive protein IAA15 OS=Oryza sativa subsp. japonica GN=IAA15 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 2.610e-24 Identity = 58/109 (53.21%), Postives = 79/109 (72.48%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALE-KMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIALAPKA 401 V++D APYLRKV+L Y Y +L +AL+ K FS FTI + G+ E KL D + G+EYV TYEDKDGDWMLVGDVP +MF+++C+RL++MK S+A+ LAP++ Sbjct: 112 VAVDGAPYLRKVDLEAYRGYDQLLAALQDKFFSHFTIRKLGNEEM---------KLVDAVSGNEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLAPRS 211 The following BLAST results are available for this feature:
BLAST of DY258464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258464 ID=DY258464; Name=DY258464; organism=Citrus clementina; type=EST; length=1305bpback to top |