DY258464

Overview
NameDY258464
Unique NameDY258464
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1305
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA31_ORYSJ (Auxin-responsive protein IAA31 OS=Oryza sativa subsp. japonica GN=IAA31 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.987e-20
Identity = 54/104 (51.92%), Postives = 65/104 (62.50%), Query Frame = 3
Query:   78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIAL 389
            VSMD APYLRK++L  Y  Y EL  ALE MF CF+ G                     ++ S++ +TYEDKDGD MLVGDVP EMFI +CKRL+IMKGS+A  L
Sbjct:  104 VSMDGAPYLRKIDLKVYKGYRELREALEAMFLCFSGGAAADAA---------------VNPSDFAVTYEDKDGDLMLVGDVPFEMFISTCKRLRIMKGSEARGL 192          
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: AX22A_PHAAU (Auxin-induced protein 22A OS=Phaseolus aureus GN=AUX22A PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.690e-20
Identity = 59/118 (50.00%), Postives = 76/118 (64.41%), Query Frame = 3
Query:   78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDA--IALAPKAMEKSKIRN 425
            VSMD AP+LRK++L  +  Y +L+ ALEK+F C+     G  EA          LK++ +G E+V  YEDKDGDWMLVGDVP EMF++SCKRL+IMK +DA    L PK   K  I +
Sbjct:   90 VSMDGAPFLRKMDLGMHKGYSDLAFALEKLFGCY-----GMVEA----------LKNVENG-EHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRADAKGFGLQPKGSLKGFIES 191          
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: AUX22_SOYBN (Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.135e-19
Identity = 57/118 (48.31%), Postives = 72/118 (61.02%), Query Frame = 3
Query:   78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDA--IALAPKAMEKSKIRN 425
            VSMD AP+LRK++L  +  Y +L+ AL+K+F C+              M+   K  D    SE+V  YEDKDGDWMLVGDVP EMF++SCKRL+IMK SDA    L PK   K  I +
Sbjct:   91 VSMDGAPFLRKIDLGLHKGYSDLALALDKLFGCYG-------------MVEALKNAD---NSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKKSDAKGFGLQPKGSLKGFIES 192          
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: AX22C_PHAAU (Auxin-induced protein 22C OS=Phaseolus aureus GN=AUX22C PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.528e-19
Identity = 57/116 (49.14%), Postives = 70/116 (60.34%), Query Frame = 3
Query:   78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDA--IALAPKAMEKSKI 419
            VSMD AP+LRK++L  +  Y +L+ AL+K F C+ I +                LKD    +E+V  YEDKDGDWMLVGDVP EMF +SCKRL+IMK SDA    L PK   K  I
Sbjct:   84 VSMDGAPFLRKIDLAMHKGYSDLAFALDKFFGCYGICEA---------------LKDA-ENAEHVPIYEDKDGDWMLVGDVPWEMFRESCKRLRIMKRSDAKGFDLQPKGSLKGFI 183          
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSJ (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.639e-18
Identity = 52/107 (48.60%), Postives = 67/107 (62.62%), Query Frame = 3
Query:   78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIALAPK 398
            V+MD     RKV+L  + +Y  L+ ALE MF+  +IG C SH     ++L  S        +EY LTYED+DGDWMLVGDVP EMF+ S KRL+IM+ SDA  L  +
Sbjct:  168 VNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNS--------AEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 266          
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSI (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.639e-18
Identity = 52/107 (48.60%), Postives = 67/107 (62.62%), Query Frame = 3
Query:   78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIALAPK 398
            V+MD     RKV+L  + +Y  L+ ALE MF+  +IG C SH     ++L  S        +EY LTYED+DGDWMLVGDVP EMF+ S KRL+IM+ SDA  L  +
Sbjct:  168 VNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNS--------AEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 266          
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA12_ORYSJ (Auxin-responsive protein IAA12 OS=Oryza sativa subsp. japonica GN=IAA12 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.140e-18
Identity = 52/111 (46.85%), Postives = 68/111 (61.26%), Query Frame = 3
Query:   78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIAL-APKAME 407
            VSMD APYLRK++L  Y  Y EL  ALE MF CF+    G++                   SE+ +TY+DKDGD MLVGDVP +MF  +CK+L+IMK S+A  L +P+ M+
Sbjct:  133 VSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSGAADGANP------------------SEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQMK 225          
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA26_ORYSJ (Auxin-responsive protein IAA26 OS=Oryza sativa subsp. japonica GN=IAA26 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.062e-17
Identity = 50/108 (46.30%), Postives = 62/108 (57.41%), Query Frame = 3
Query:   78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIALAPKA 401
            VSMD  PYLRKV++  Y +Y EL  AL  MF C TIG                 L D     E+ + YED DGDWMLVGDVP EMF+ SCKR+++M+  +A  L+  A
Sbjct:   50 VSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIG-----------------LMDGYGEWEHAVVYEDGDGDWMLVGDVPWEMFVSSCKRMRVMRACEARGLSSNA 140          
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA14_ORYSJ (Auxin-responsive protein IAA14 OS=Oryza sativa subsp. japonica GN=IAA14 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 5.272e-17
Identity = 47/101 (46.53%), Postives = 59/101 (58.42%), Query Frame = 3
Query:   78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDA 380
            VSMD APYLRKV+L  Y  Y EL  AL+ +F CF+     S                    + + + YEDKDGD ML GDVP +MFI SCK+L+IM+GS+A
Sbjct:  113 VSMDGAPYLRKVDLRMYGGYRELRDALDALFGCFSADASAS-------------------AAHFAVAYEDKDGDLMLAGDVPWDMFISSCKKLRIMRGSEA 194          
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA19_ARATH (Auxin-responsive protein IAA19 OS=Arabidopsis thaliana GN=IAA19 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 6.885e-17
Identity = 53/113 (46.90%), Postives = 67/113 (59.29%), Query Frame = 3
Query:   78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDA--IALAPKAMEK 410
            VSMD  PYLRK++L +   Y +L+ AL+K+F    IG                 LKD     EYV  YEDKDGDWML GDVP  MF++SCKRL+IMK SDA    L P+ +++
Sbjct:  101 VSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVA---------------LKDG-DNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMKRSDATGFGLQPRGVDE 197          
The following BLAST results are available for this feature:
BLAST of DY258464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
IAA31_ORYSJ2.987e-2051.92Auxin-responsive protein IAA31 OS=Oryza sativa sub... [more]
AX22A_PHAAU8.690e-2050.00Auxin-induced protein 22A OS=Phaseolus aureus GN=A... [more]
AUX22_SOYBN1.135e-1948.31Auxin-induced protein AUX22 OS=Glycine max GN=AUX2... [more]
AX22C_PHAAU2.528e-1949.14Auxin-induced protein 22C OS=Phaseolus aureus GN=A... [more]
IAA10_ORYSJ1.639e-1848.60Auxin-responsive protein IAA10 OS=Oryza sativa sub... [more]
IAA10_ORYSI1.639e-1848.60Auxin-responsive protein IAA10 OS=Oryza sativa sub... [more]
IAA12_ORYSJ2.140e-1846.85Auxin-responsive protein IAA12 OS=Oryza sativa sub... [more]
IAA26_ORYSJ1.062e-1746.30Auxin-responsive protein IAA26 OS=Oryza sativa sub... [more]
IAA14_ORYSJ5.272e-1746.53Auxin-responsive protein IAA14 OS=Oryza sativa sub... [more]
IAA19_ARATH6.885e-1746.90Auxin-responsive protein IAA19 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1DF04FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258464 ID=DY258464; Name=DY258464; organism=Citrus clementina; type=EST; length=1305bp
TAAGACACTGGCAGCCACATCAATAATTCCTGAGGAATTACACCGTTGCC
GCTGCTCTGGAGCTCTTTTTATTACTAGTTAGCATGGACAGAGCTCCTTA
TTTGAGGAAAGTAAATTTAACAACATACACCAATTATGGGGAACTATCTT
CTGCTCTGGAGAAGATGTTCAGTTGCTTTACAATTGGTCAATGTGGATCA
CATGAAGCACCAGGGAGGGAAATGCTGAGTGAGAGCAAGTTGAAAGATCT
TTTGCATGGATCAGAATATGTGCTTACATATGAGGACAAGGATGGTGACT
GGATGCTCGTTGGGGATGTGCCGCGGGAGATGTTTATTGATTCATGCAAG
CGATTAAAGATCATGAAAGGTTCTGATGCCATTGCCTTAGCTCCCAAGGC
AATGGAAAAATCCAAGATCAGGAACTAGTGAATGTCTGTCTGGGATGGGG
TGCCTTCTAGTTCATGCCTTTCATGGGTAGGAGGAGACTGGGTTGATGAT
AAGTTAAAAAGGACAGGATGGCATGGGCAAGATGCAAGTTTGCGGTTCAG
TTGTGTATCCTGTTTGTTAACATGAGGCTTGCGTTACTTGTTTACGTTCG
GAAGAAGTCTATGTTTATGATATGATTGATGTCAAACCCTGTTGAAACAC
AAACAAATTTAGGATTCGTGGAAGTACACATCTATCTAGTGACTGGGATC
TTAATAAAAAAATAAAAAAACAAAAAAAAACCCCACTCTCTTGCACAACT
TTGGCATTAAAAGAAAGGATCGCTAAACAATATTCCTGACACACACCCCC
CCCTCTCCAACCAACTTCAAAATCCTAATTTGCCTCACCACGAACCAACC
CCAACCCCGGCTCCCAATTAACTAGGCCAAACACTCATACCCCGCAACTC
CGCGCCCTGGTCCCCAATATCAGAACTACAACTTCCCCCTCAACAAACAC
ACTCCACCCCTAACCCCAAACACCCCTCCTCCCTTTCCACTGTCTTCTCC
CCTAATTTTTCTCCCTCCACTTCCCCCCCCCCTCACCCCCCCGACATAAC
TTCGCTTTCATATTGTCTAGGAATCACCCACATCGCGCAGCACTTTCCCA
CTACGACCACCTACCTCCTCCACATCCTACCCCGCTCTTCACCTCCTATA
CCCTCCTCCCCCTACCCCACTACACTCACTTTACCTATTTATATTCCCAC
CCCACTACACACCCAGTCTTACTAATNAAACCCGTCTCCCAAAATACATT
CTCCCACCACCACCACCTACCCTTCTTACGCANACCGTCAGTACGACCAG
TGACC
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