DY258464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA15_ARATH (Auxin-responsive protein IAA15 OS=Arabidopsis thaliana GN=IAA15 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.885e-17 Identity = 48/104 (46.15%), Postives = 66/104 (63.46%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIAL 389 V++D A YLRKV+L Y YG+L +ALE MF + +++ ++ +L E+V TYEDKDGD MLVGDVP MF++SCKR+++MK DAI L Sbjct: 91 VALDGAAYLRKVDLGMYDCYGQLFTALENMF---------------QGIITICRVTELERKGEFVATYEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA12_ARATH (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana GN=IAA12 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.885e-17 Identity = 54/117 (46.15%), Postives = 72/117 (61.54%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIALAPKAME-KSKIRN 425 V+MD RKV++ +++Y L+ LE+MF T C RE + +L D S++VLTYEDK+GDWMLVGDVP MFI+S KRL+IM S+A LAP+ E K + RN Sbjct: 129 VNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTC-------REKVKPLRLLD--GSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPRRQEQKDRQRN 236
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA6_ARATH (Auxin-responsive protein IAA6 OS=Arabidopsis thaliana GN=IAA6 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 3.417e-16 Identity = 47/101 (46.53%), Postives = 61/101 (60.40%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDA 380 VSMD PY+RK++L + +Y L + LE +F C IG + E K EY++ YEDKD DWMLVGDVP +MF +SCKRL+I+K SDA Sbjct: 98 VSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIG-----------VAKEGKK------CEYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDA 181
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA24_ORYSJ (Auxin-responsive protein IAA24 OS=Oryza sativa subsp. japonica GN=IAA24 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 4.463e-16 Identity = 49/102 (48.04%), Postives = 61/102 (59.80%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFS-CFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDA 380 VSMD APYLRKV+L Y EL AL+ +F+ CF+ + D ++ + YEDKDGD MLVGDVP EMFI SCK+L+IMKGS+A Sbjct: 134 VSMDGAPYLRKVDLKMCKGYRELREALDLLFTKCFS-----------------ATASDGCSDGQFAIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSEA 218
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA5_ARATH (Auxin-responsive protein IAA5 OS=Arabidopsis thaliana GN=IAA5 PE=2 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 7.613e-16 Identity = 47/99 (47.47%), Postives = 58/99 (58.59%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGS 374 VS+D A +LRK++L Y Y +L+SAL+ +F C+ D L SE V YEDKDGDWML GDVP EMF+ SCKRL+IMK S Sbjct: 79 VSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYI------------------NFDDTLKESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRS 159
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA13_ARATH (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana GN=IAA13 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 9.943e-16 Identity = 53/117 (45.30%), Postives = 70/117 (59.83%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMF---SCFTIGQCGSHEAPGREMLSESKLKDLLHGS-EYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIALAPKAMEKSK 416 V+MD RKV+L +++Y L+ LE MF + T+G P R LL GS E+VLTYEDK+GDWMLVGDVP MFI+S KRL++MK S+A LA + E ++ Sbjct: 134 VNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLR----------LLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNE 240
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA2_ORYSJ (Auxin-responsive protein IAA2 OS=Oryza sativa subsp. japonica GN=IAA2 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.177e-14 Identity = 41/100 (41.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSD 377 ++MD P RKV+L Y Y +LS+A++K+F G + A + +++ G EY L YED +GD MLVGDVP +MFI + KRL+++K SD Sbjct: 123 INMDGVPIGRKVDLAAYGGYAQLSAAVDKLFR----GLLAAQSAAADGEADAAAAGEMVGGGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSD 218
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA11_ARATH (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 7.125e-14 Identity = 51/106 (48.11%), Postives = 65/106 (61.32%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSE-YVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIALA 392 V+MD P RK++L + Y LS+ LE+MF +G + E G E+ +K L GS VLTYEDK+GDWMLVGDVP MFI S +RL+IMK S+A A Sbjct: 141 VTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGS-RTLETDGH---METPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKA 242
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA26_ARATH (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana GN=IAA26 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 3.536e-13 Identity = 42/101 (41.58%), Postives = 60/101 (59.41%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGS-EYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSD 377 ++MD P RKV+L Y +Y +LS ++K+F Q + G E + LL G E+ LTYED +GD MLVGDVP +MF+ S KRL+++K S+ Sbjct: 156 INMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEE----KPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSE 252
BLAST of DY258464 vs. ExPASy Swiss-Prot
Match: IAA16_ORYSJ (Auxin-responsive protein IAA16 OS=Oryza sativa subsp. japonica GN=IAA16 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 6.032e-13 Identity = 46/123 (37.40%), Postives = 68/123 (55.28%), Query Frame = 3 Query: 78 VSMDRAPYLRKVNLTTYTNYGELSSALEKMFSCF-------TIGQCGSHEAPGREMLSESK-LKDLLHGS--EYVLTYEDKDGDWMLVGDVPREMFIDSCKRLKIMKGSDAIALAPKAMEKSK 416 V+MD P RKV+L + YGELS+A++++F T+ + A G E + + LL G EY L YED +GD MLVGDVP MFI + +RL++++ SD A +A + + Sbjct: 102 VNMDGVPIGRKVDLAAHGGYGELSAAVDRLFRGLLAAQRDPTMATAAAAAAAGESCTGEEEAIAGLLDGGSGEYTLVYEDDEGDQMLVGDVPWNMFIAAARRLRVLRSSDLNASTIRAGSRKR 224 The following BLAST results are available for this feature:
BLAST of DY258464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258464 ID=DY258464; Name=DY258464; organism=Citrus clementina; type=EST; length=1305bpback to top |