DY258468

Overview
NameDY258468
Unique NameDY258468
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1246
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258468 vs. ExPASy Swiss-Prot
Match: ERG6_CLAL4 (Sterol 24-C-methyltransferase OS=Clavispora lusitaniae (strain ATCC 42720) GN=ERG6 PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 1.019e-62
Identity = 109/220 (49.55%), Postives = 153/220 (69.55%), Query Frame = 1
Query:  280 EEEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQKHKKIKAEIEMGDGLPDIKSTKKCLEALKQAGFEVKGEKIL 939
            +E++R  +Y+ +   YY+LVT FYE+GWG SFHF+  +KGE+ +++  RHEHFLA ++ +    +VLDVGCG+GGP REI RF+  ++ GLNNN+YQ+ R +   +   +D   ++VK DFM+M F   SFDAVYAIEAT HAP   G Y EIY+VLKPG  F  YEW +TD +D NN++H+KI   IE+GDG+P +   +   +ALK  GF+++ EK L
Sbjct:   61 DEKKRLDDYSSLTKNYYNLVTDFYEYGWGSSFHFSRYYKGEAFRQATARHEHFLAHKMNINENMRVLDVGCGVGGPGREICRFTDCTIVGLNNNDYQVERAQYYAKKYKLDDKLSYVKGDFMQMDFEPESFDAVYAIEATVHAPVLEGVYSEIYKVLKPGGVFGVYEWVMTDKYDENNEEHRKIAYGIEVGDGIPKMYKREVAEQALKNVGFDIEYEKDL 280          
BLAST of DY258468 vs. ExPASy Swiss-Prot
Match: ERG6_SCHPO (Sterol 24-C-methyltransferase OS=Schizosaccharomyces pombe GN=SPBC16E9.05 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.737e-62
Identity = 123/267 (46.07%), Postives = 166/267 (62.17%), Query Frame = 1
Query:  244 EKYEKYHVCYGGEEEERKAN----YTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQKHKKIKAEIEMGDGLPDIKSTKKCLEALKQAGFEVKGEKILLPNPPSQELGLGYPHFSRNTFPLTSLWNFWE 1032
            E +E +   +  E EE +A     Y  +VN YYDL T  YE+GW +SFHF+  +KGE+  +SI RHEH+LA ++G+K G +VLDVGCG+GGP REI  F+  ++ GLNNN+YQI+R         +DK   FVK DFM MPF DN+FD VYAIEAT HAP   G Y EI+RVLKPG  F  YEW ++D +D +  KH++I   IE+GDG+P +      +EA+K+ GF +  E  L  +  + +L   YP     T  +T   N W+
Sbjct:   47 EYFEFWDRNHENESEEDRARRIDGYKSVVNSYYDLATDLYEYGWSQSFHFSRFYKGEAFAQSIARHEHYLAYRMGIKPGSRVLDVGCGVGGPAREITEFTGCNLVGLNNNDYQISRCNNYAVKRNLDKKQVFVKGDFMHMPFEDNTFDYVYAIEATVHAPSLEGVYGEIFRVLKPGGVFGVYEWVMSDDYDSSIPKHREIAYNIEVGDGIPQMVRKCDAVEAIKKVGFNLLEEDDLTDH-DNPDLPWYYP----LTGDITKCQNIWD 308          
BLAST of DY258468 vs. ExPASy Swiss-Prot
Match: ERG6_NEUCR (Sterol 24-C-methyltransferase OS=Neurospora crassa GN=B24P7.240 PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 5.055e-62
Identity = 111/214 (51.87%), Postives = 143/214 (66.82%), Query Frame = 1
Query:  280 EEEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQKHKKIKAEIEMGDGLPDIKSTKKCLEALKQAGFEV 921
            + E R   Y  +   YY+L T  YE+GWG+ FHF     GES  ++I RHEH+LA Q+G+K   KVLDVGCG+GGP REIA+F+   +TGLNNN+YQI R        G+     FVK DFM+M FPDNSFDAVYAIEAT HAP   G Y EIYRVLKPG  F  YEW +TD +D +N +H+ I+  IE+G+G+ ++ +  + L A+K  GFE+
Sbjct:   67 DREARTKEYATLTRHYYNLATDIYEYGWGQCFHFCRYSPGESFYQAIARHEHYLAAQIGIKKDMKVLDVGCGVGGPAREIAKFTDAHITGLNNNDYQIDRATHYAVRDGLSGQLKFVKGDFMQMSFPDNSFDAVYAIEATVHAPKLEGVYGEIYRVLKPGGTFGVYEWLMTDNYDNDNVEHRDIRLAIEVGNGISNMVTISEGLAAMKNVGFEL 280          
BLAST of DY258468 vs. ExPASy Swiss-Prot
Match: ERG6_PNECA (Sterol 24-C-methyltransferase OS=Pneumocystis carinii GN=erg6 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 2.348e-59
Identity = 106/225 (47.11%), Postives = 148/225 (65.78%), Query Frame = 1
Query:  283 EEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQKHKKIKAEIEMGDGLPDIKSTKKCLEALKQAGFE-VKGEKILLPNPP 954
            ++ER   Y  +   YY+LVT FYE+GW  SFHF    K ES  ++I RHEH++AL  G++ G+ VLDVGCG+GGP  +I+ F+  ++ GLNNN+YQI R K  +   G+     F+K DFM+MPFP+NSFD +Y+IEAT HAP   G Y EIYRVLKPG  +A+YEW + + +D N+ +H++I   IE+GD +P I    +   AL + GFE +  E++   N P
Sbjct:   66 QQERFKFYATLTRHYYNLVTDFYEYGWSTSFHFCRFAKDESFSQAIARHEHYIALHAGIREGETVLDVGCGVGGPACQISVFTGANIVGLNNNDYQIQRAKYYSEKKGLSDKLKFIKGDFMQMPFPENSFDKIYSIEATIHAPSLEGVYSEIYRVLKPGGLYASYEWVMLNKYDENDPEHQQIVYGIEIGDSIPKISKIGEAEAALIKVGFEIIHSEELSTKNSP 290          
BLAST of DY258468 vs. ExPASy Swiss-Prot
Match: ERG6_MAGGR (Sterol 24-C-methyltransferase OS=Magnaporthe grisea GN=ERG6 PE=2 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 8.922e-59
Identity = 105/223 (47.09%), Postives = 149/223 (66.82%), Query Frame = 1
Query:  286 EERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFA--GVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQKHKKIKAEIEMGDGLPDIKSTKKCLEALKQAGFEVKGEKILLPN 948
            EERKA+Y  +  +YY+LVT FYE+GWG+SFHF     GE+   +I R+EH LA ++G+K G KVLD+GCG+GGP R+IA+F+  ++TG+  NEYQ+ R +        G  +   FV+ DFM +PF   +FDAVY+IEAT HAP     YK+I+ VLKPG  F  YEW +TDA+D N+  HK+I+  IE G G+ ++++ +  + A+K AGFE+   + L  N
Sbjct:   75 EERKADYATLTRQYYNLVTDFYEYGWGQSFHFCTFAPGETFASAITRYEHTLAHRIGIKKGMKVLDIGCGVGGPARQIAKFTGANITGITINEYQVERARRYAEMEGYGAGEQLKFVQGDFMALPFEKETFDAVYSIEATVHAPKLEDVYKQIFNVLKPGGIFGLYEWVMTDAYDENDPHHKEIRFGIEHGGGIANLQTAQTAIAAIKAAGFELLESEDLADN 297          
BLAST of DY258468 vs. ExPASy Swiss-Prot
Match: SMT3B_ARATH (24-methylenesterol C-methyltransferase 3 OS=Arabidopsis thaliana GN=SMT3 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 5.413e-56
Identity = 110/253 (43.48%), Postives = 154/253 (60.87%), Query Frame = 1
Query:  205 GGKIDKTEVLSAVEKYEKYHVCYGGEEE-ERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQKHKKIKAEIEMGDGLPDIKSTKKCLEALKQAGFEVKGEKILLPNPPSQ 960
            GG I   +V    + Y +Y   +   +E E      D V+ +Y+LVT  YE+GWG+SFHF+P   G+S +++ + HE      + +K GQK+LD GCG+GGP+R IA  S   VTG+  NEYQ+ R K  N+ AG+D  CN V  +F+KMPF +N+FD  Y+IEATCHAP     Y EI+RV+KPG  F +YEW  T+ +  ++++HK +   IE GD LP ++S        K+ GFEV  EK  L  PPS+
Sbjct:   39 GGSISAEKVK---DNYNQYWSFFRKPKEIESAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPHVPGKSDKDATRIHEEMAVDLIKVKPGQKILDAGCGVGGPMRAIAAHSKAQVTGITINEYQVQRAKLHNKKAGLDSLCNVVCGNFLKMPFDENTFDGAYSIEATCHAPKLEEVYSEIFRVMKPGSLFVSYEWVTTEKYRDDDEEHKDVIQGIERGDALPGLRSYADIAVTAKKVGFEVVKEKD-LAKPPSK 287          
BLAST of DY258468 vs. ExPASy Swiss-Prot
Match: SMT2_ARATH (24-methylenesterol C-methyltransferase 2 OS=Arabidopsis thaliana GN=SMT2 PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 2.686e-55
Identity = 108/253 (42.69%), Postives = 155/253 (61.26%), Query Frame = 1
Query:  205 GGKIDKTEVLSAVEKYEKYHVCYGGEEE-ERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQKHKKIKAEIEMGDGLPDIKSTKKCLEALKQAGFEVKGEKILLPNPPSQ 960
            GG I   +V    + Y++Y   +   +E E      D V+ +Y+LVT  YE+GWG+SFHF+P   G+S +++ + HE      + +K GQK+LDVGCG+GGP+R IA  S  +V G+  NEYQ+ R +  N+ AG+D  C  V  +F++MPF DNSFD  Y+IEATCHAP     Y EIYRVLKPG  + +YEW  T+ F   + +H ++   IE GD LP +++     E  K+ GFE+  EK  L +PP++
Sbjct:   39 GGSISAEKVQ---DNYKQYWSFFRRPKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHKDATRLHEEMAVDLIQVKPGQKILDVGCGVGGPMRAIASHSRANVVGITINEYQVNRARLHNKKAGLDALCEVVCGNFLQMPFDDNSFDGAYSIEATCHAPKLEEVYAEIYRVLKPGSMYVSYEWVTTEKFKAEDDEHVEVIQGIERGDALPGLRAYVDIAETAKKVGFEIVKEKD-LASPPAE 287          
BLAST of DY258468 vs. ExPASy Swiss-Prot
Match: SMT2_ORYSJ (24-methylenesterol C-methyltransferase 2 OS=Oryza sativa subsp. japonica GN=Smt2-1 PE=2 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 3.398e-50
Identity = 97/214 (45.33%), Postives = 134/214 (62.62%), Query Frame = 1
Query:  316 VNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQKHKKIKAEIEMGDGLPDIKSTKKCLEALKQAGFEVKGEKILLPNPPS 957
            V+ +Y+LVT  YE+GWG+SFHF+P   G S +E+ + HE  +A  L  K G ++LDVGCG+GGP+R IA  S ++V G+  NEYQ+ R +  NR AG+D  C  V  +F+ MPF D SFD  Y+IEATCHAP     Y E++RVLKPG  + +YEW  T  +  +N +H +    IE GD LP ++   +     K+ GFEV  E + L  PP+
Sbjct:   79 VDTFYNLVTDIYEWGWGQSFHFSPSLPGRSHREATRVHEERVADLLQAKPGHRLLDVGCGVGGPMRAIAAHSGSNVVGITINEYQVNRARAHNRKAGLDSRCEVVCGNFLSMPFSDASFDGAYSIEATCHAPRLQDVYGEVFRVLKPGGLYVSYEWVTTSLYRADNPEHVEAIHGIERGDALPGLRRQDEIASIAKEVGFEVLKE-LDLALPPA 291          
BLAST of DY258468 vs. ExPASy Swiss-Prot
Match: PEAMT_SPIOL (Phosphoethanolamine N-methyltransferase OS=Spinacia oleracea GN=PEAMT PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.797e-12
Identity = 53/156 (33.97%), Postives = 77/156 (49.36%), Query Frame = 1
Query:  448 QLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQKHKKIKAEIEMGDGLPDIKSTKKCLEALKQAGF 915
            +L LK GQKVLDVGCGIGG    +A      V G++ +   I+    L R  G+     F  AD  K  +P+NSFD +Y+ +   H  D    ++  ++ LKPG      ++C   A  P+ +    I+   + G  L D+K+  K    LK AGF
Sbjct:  280 KLDLKPGQKVLDVGCGIGGGDFYMAENYDVEVVGIDLSINMISFA--LERSIGLKCAVEFEVADCTKKDYPENSFDVIYSRDTILHIQDKPALFRSFHKWLKPGGKVLISDYC-KSAGTPSAEFAAYIR---QRGYDLHDVKAYGK---MLKDAGF 426          
BLAST of DY258468 vs. ExPASy Swiss-Prot
Match: GTOMC_ARATH (Tocopherol O-methyltransferase, chloroplastic OS=Arabidopsis thaliana GN=G-TMT PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 8.183e-12
Identity = 48/170 (28.24%), Postives = 73/170 (42.94%), Query Frame = 1
Query:  316 VNKYYDLVTSFYEFGWGESFHFAPRWKGESLQESIKRHEHFLALQL-------GL------KSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWC 786
            + ++Y+  +  +E  WG+  H        S+Q S   H+      +       G+      K  +KV+DVGCGIGG  R +A        G+  +  Q  R  +L     +    +F  AD +  PF D  FD V+++E+  H PD     KE+ RV  PG       WC
Sbjct:   64 IAEFYNETSGLWEEIWGDHMHHGFYDPDSSVQLSDSGHKEAQIRMIEESLRFAGVTDEEEEKKIKKVVDVGCGIGGSSRYLASKFGAECIGITLSPVQAKRANDLAAAQSLAHKASFQVADALDQPFEDGKFDLVWSMESGEHMPDKAKFVKELVRVAAPGGRIIIVTWC 233          
The following BLAST results are available for this feature:
BLAST of DY258468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
ERG6_CLAL41.019e-6249.55Sterol 24-C-methyltransferase OS=Clavispora lusita... [more]
ERG6_SCHPO1.737e-6246.07Sterol 24-C-methyltransferase OS=Schizosaccharomyc... [more]
ERG6_NEUCR5.055e-6251.87Sterol 24-C-methyltransferase OS=Neurospora crassa... [more]
ERG6_PNECA2.348e-5947.11Sterol 24-C-methyltransferase OS=Pneumocystis cari... [more]
ERG6_MAGGR8.922e-5947.09Sterol 24-C-methyltransferase OS=Magnaporthe grise... [more]
SMT3B_ARATH5.413e-5643.4824-methylenesterol C-methyltransferase 3 OS=Arabid... [more]
SMT2_ARATH2.686e-5542.6924-methylenesterol C-methyltransferase 2 OS=Arabid... [more]
SMT2_ORYSJ3.398e-5045.3324-methylenesterol C-methyltransferase 2 OS=Oryza ... [more]
PEAMT_SPIOL4.797e-1233.97Phosphoethanolamine N-methyltransferase OS=Spinaci... [more]
GTOMC_ARATH8.183e-1228.24Tocopherol O-methyltransferase, chloroplastic OS=A... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI1DF11FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258468 ID=DY258468; Name=DY258468; organism=Citrus clementina; type=EST; length=1246bp
GTTACATTAAAAAGATGTTTGTATTTTTTCATTTAAGCTGTCTGTACTCT
ACTCTGTAGATTCCAAAGCTCCTTCAGTCTTCACACACAACAGAAACACA
CCTTCTCTCTGTTCCGAATTCTCCTTCTCTTTTTGCGGCTCTTTCAACAT
CGGTATATTGCGAGAATGTCGAAGGCTGGAGCTTTTGATTTGGCTTCTGG
AGTGGGCGGAAAGATTGATAAAACCGAAGTGCTCTCCGCCGTCGAAAAGT
ATGAGAAGTATCATGTCTGTTATGGAGGTGAAGAGGAAGAGAGAAAAGCT
AACTACACTGACATGGTTAATAAATATTATGATCTTGTTACCAGCTTTTA
TGAGTTTGGCTGGGGGGAGTCATTCCATTTTGCACCAAGATGGAAAGGAG
AGTCTCTTCAGGAGAGTATCAAGCGACATGAGCACTTCCTTGCTTTGCAA
CTTGGCCTTAAATCTGGGCAGAAGGTTTTGGATGTTGGATGTGGAATTGG
TGGACCCTTGAGAGAAATTGCTCGATTCAGCTCAACATCAGTTACTGGGT
TGAACAACAATGAGTATCAGATAACAAGAGGAAAGGAATTAAACCGCTTT
GCAGGAGTGGACAAGACCTGCAACTTTGTAAAGGCTGACTTCATGAAAAT
GCCATTTCCTGACAATAGTTTTGATGCTGTGTATGCAATTGAAGCAACCT
GTCATGCTCCAGATGCATATGGATGCTACAAAGAGATTTACAGAGTATTA
AAGCCTGGCCAATGTTTTGCTGCATATGAATGGTGCTTGACTGATGCGTT
TGATCCAAACAATCAAAAACATAAAAAAATTAAGGCGGAAATCGAGATGG
GTGATGGGCTCCCAGACATCAAGTCGACTAAAAAATGCTTGGAAGCTCTG
AAACAAGCTGGTTTTGAGGTGAAAGGGGAAAAAATCTTGCTCCCGAATCC
CCCCTCCCAGGAACTTGGCCTTGGATACCCCCACTTTTCCCGGAATACCT
TCCCCCTAACATCCCTTTGGAATTTTTGGGAAAAAAAAAATGGGGGAAAA
CCCCTAAAATTTGGGGGAACCAACCCCCAAAGGAAAATCAAAGGGGGTTC
AAAAATTTTCTGGGAAAAAGGAACCCAAAAAGGATTGGGTTGGGGGGGGG
GGAGGGAAAAGAAAATTTTTTCCCCCCCCCATGGTTTCTTTTTCTTTTTT
TGGCCCCCCGCAGCCCCCCCCAACCCCGGTGGGGGTAAAATTTTTG
back to top