DY258481

Overview
NameDY258481
Unique NameDY258481
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length770
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258481 vs. ExPASy Swiss-Prot
Match: LAC3_BOTFU (Laccase-3 (Fragment) OS=Botryotinia fuckeliana GN=lcc3 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.421e-11
Identity = 33/88 (37.50%), Postives = 41/88 (46.59%), Query Frame = 2
Query:  329 NANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGV 589
            N N    +++  HP HLHGHDF++LG G G +                    + P G W  L F  DNPGAW  HCHI  H   G+ V
Sbjct:  363 NVNGNPVSINVPHPMHLHGHDFFLLGTGVGTYNNTINGPSLDYDNPTRRDVAMLPAGGWMVLAFQTDNPGAWLMHCHIAWHVSEGLAV 450          
BLAST of DY258481 vs. ExPASy Swiss-Prot
Match: FET3_CANGA (Iron transport multicopper oxidase FET3 OS=Candida glabrata GN=FET3 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.621e-11
Identity = 53/192 (27.60%), Postives = 76/192 (39.58%), Query Frame = 2
Query:   92 NTINGFTKWAINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVL--------GRGEGKFTKED-EXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 640
            N ING      NN++   P  P L ++                 S   D + P +    T     ++L     VD+I+ N +  +      HP+HLHGH F  +         +GE   +  D +            T  + P     LRF ADNPG W FHCHIE H   G+ VV+     ++ N  +Q L
Sbjct:  347 NLINGVNYAFFNNITYTTPKVPTLLTV----------------LSAGQDALNPFIYGTNT---NTFVLKKGEVVDLIVNNQDTGK------HPFHLHGHVFQTILRDREFDDAKGEKPHSFNDSDHAAYPSIPMKRDTVYLNPQSNMVLRFKADNPGVWFFHCHIEWHLLQGLAVVMVEDPISIQNTASQHL 513          
The following BLAST results are available for this feature:
BLAST of DY258481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
LAC3_BOTFU3.421e-1137.50Laccase-3 (Fragment) OS=Botryotinia fuckeliana GN=... [more]
FET3_CANGA7.621e-1127.60Iron transport multicopper oxidase FET3 OS=Candida... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1DH09FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258481 ID=DY258481; Name=DY258481; organism=Citrus clementina; type=EST; length=770bp
CAAATCATTCTCCAACAAAATATTTGCCCTAATGGGATCCCCCAAGCCTC
CCACAAATTTCCACCGTCGGCTCACCCTTCTTAACACTCAAAACACCATT
AATGGGTTCACTAAGTGGGCTATTAACAATGTGTCCCTGAATTTACCCCC
CACTCCTTACTTAGGATCCATCAAATATGGTCTTAAAGATGCTTTTGATC
AGAATGGTCCCCCCGAAAACTTCTCGAATGAGTATGACGTGATGAAACCT
CCTGTAAACGCTAATACAACTCTTGGAAGTGGGGTTTACATGCTTGGTTT
AAACACCACAGTTGATGTTATACTTCAAAATGCAAACGCGATAAGGCCAA
ACTTGAGTGAAACCCACCCTTGGCATTTGCATGGGCATGATTTTTGGGTA
TTAGGGCGCGGAGAAGGGAAGTTTACGAAAGAAGATGAGAAGAAATTTAA
CTTGAAGAATCCACCATTGAAAAATACTGCGGTGATATTCCCATATGGCT
GGACTGCTTTAAGATTTGTTGCTGATAATCCAGGTGCTTGGGCATTTCAC
TGCCATATTGAGCCCCATTTCCATATTGGAATGGGTGTGGTTCTTGCTCT
TGGTGTTGAAACCGTTGGTAATATTCCAAACCAGGCGTTGGCTTGTGGTT
TGACTGGGAAAAGGTTCATGAACCCTAAACAAAATTGAGGCTAGCTAGTT
TGTTTTATGTACTTTATTCCTGGAGTTTCTATTGTTGTTTTGATATTTAT
ATTAATAAAATTTCGGAAGT
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