DY258554

Overview
NameDY258554
Unique NameDY258554
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length473
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 4.390e-25
Identity = 52/93 (55.91%), Postives = 68/93 (73.12%), Query Frame = 3
Query:    3 GGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVN 281
            G NG    N D+ TP+ FDN YF+NL+  +GLLQ+DQELFST G+ T AIV  +  +QT FF +FV SMI++GN+ PLTG  G+IR +C+RVN
Sbjct:  232 GNNGNTFTNLDISTPNDFDNDYFTNLQSNQGLLQTDQELFSTSGSATIAIVNRYAGSQTQFFDDFVSSMIKLGNISPLTGTNGQIRTDCKRVN 324          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 9.779e-25
Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = 3
Query:    6 GNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNGNNNI 296
            GN +VL +FD++TP  FDNKY+ NL+  KGL+QSDQELFS+P A DT  +V ++   Q  FF  F  +MIRM +L PLTG QGEIRLNCR VN  + I
Sbjct:  235 GNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDASDTLPLVREYADGQGKFFDAFAKAMIRMSSLSPLTGKQGEIRLNCRVVNSKSKI 332          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 9.779e-25
Identity = 58/98 (59.18%), Postives = 69/98 (70.41%), Query Frame = 3
Query:    6 GNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNGNNNI 296
            GN +VL +FD++TP  FDNKY+ NL+  KGL+QSDQELFS+P A DT  +V  +   Q  FF  FV +MIRMGNL P TG QGEIRLNCR VN    I
Sbjct:  237 GNLSVLVDFDLRTPTIFDNKYYVNLKENKGLIQSDQELFSSPDASDTIPLVRAYADGQGKFFDAFVEAMIRMGNLSPSTGKQGEIRLNCRVVNSKPKI 334          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 1.277e-24
Identity = 55/96 (57.29%), Postives = 69/96 (71.88%), Query Frame = 3
Query:    6 GNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNGNN 290
            GN + L +FD++TP  FDNKY+ NL  +KGL+QSDQELFS+P A DT  +V  F  +   FF  FV +M RMGN+ PLTG QG+IRLNCR VN N+
Sbjct:  243 GNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVVNSNS 338          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.668e-24
Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = 3
Query:    6 GNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTP-GADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNGNNNI 296
            GN +VL +FD++TP  FDNKY+ NL+  KGL+QSDQELFS+P  ADT  +V  +   Q  FF  FV ++IRM +L PLTG QGEIRLNCR VN  + I
Sbjct:  235 GNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDAADTLPLVRAYADGQGTFFDAFVKAIIRMSSLSPLTGKQGEIRLNCRVVNSKSKI 332          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.716e-24
Identity = 54/96 (56.25%), Postives = 68/96 (70.83%), Query Frame = 3
Query:    6 GNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNGNN 290
            GN + L +FD++TP  FDNKY+ NL+ RKGL+QSDQELFS+P A DT  +V  +      FF  FV +M RMGN+ P TG QG+IRLNCR VN N+
Sbjct:  243 GNRSALVDFDLRTPTVFDNKYYVNLKERKGLIQSDQELFSSPNATDTIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQIRLNCRVVNSNS 338          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 8.279e-24
Identity = 54/96 (56.25%), Postives = 69/96 (71.88%), Query Frame = 3
Query:    6 GNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNGNN 290
            GN +VL +FD++TP  FDNKY+ NL+ +KGL+QSDQELFS+P A DT  +V  +      FF  FV +M RMGN+ P TG QG+IRLNCR VN N+
Sbjct:  244 GNQSVLVDFDLRTPLVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQIRLNCRVVNSNS 339          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 1.412e-23
Identity = 53/96 (55.21%), Postives = 68/96 (70.83%), Query Frame = 3
Query:    6 GNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNGNN 290
            GN  VL +FD++TP  FDNKY+ NL+  KGL+Q+DQELFS+P A DT  +V ++      FF  FV +M RMGN+ PLTG QG+IR NCR VN N+
Sbjct:  242 GNQTVLVDFDLRTPTVFDNKYYVNLKELKGLIQTDQELFSSPNATDTIPLVREYADGTQKFFNAFVEAMNRMGNITPLTGTQGQIRQNCRVVNSNS 337          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 7.008e-23
Identity = 50/93 (53.76%), Postives = 66/93 (70.97%), Query Frame = 3
Query:    3 GGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVN 281
            GG+    AN D  +PD+FDN YF NL+  +G+++SDQ LFS+ GA T ++V  F  NQ  FF NF  SMI+MGN++ LTG +GEIR +CRRVN
Sbjct:  237 GGDLTARANLDPTSPDSFDNDYFKNLQNNRGVIESDQILFSSTGAPTVSLVNRFAENQNEFFTNFARSMIKMGNVRILTGREGEIRRDCRRVN 329          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 3.846e-21
Identity = 49/85 (57.65%), Postives = 59/85 (69.41%), Query Frame = 3
Query:   27 NFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVN 281
            N D  TP+ FD  Y++NL+   G L SDQ L STPG DT  IV  F  +Q  FF++F  SMI MGN++PLTGNQGEIR NCRR+N
Sbjct:  208 NLDPTTPNKFDKNYYTNLQSNTGPLTSDQVLHSTPGEDTVKIVNLFAASQNQFFESFGQSMINMGNIQPLTGNQGEIRSNCRRLN 292          
The following BLAST results are available for this feature:
BLAST of DY258554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
PERX_TOBAC4.390e-2555.91Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER37_ARATH9.779e-2557.14Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER2_ARMRU9.779e-2559.18Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER1A_ARMRU1.277e-2457.29Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER38_ARATH1.668e-2457.14Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER34_ARATH3.716e-2456.25Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER33_ARATH8.279e-2456.25Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER32_ARATH1.412e-2355.21Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER58_ARATH7.008e-2353.76Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER2_CUCSA3.846e-2157.65Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BD09FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258554 ID=DY258554; Name=DY258554; organism=Citrus clementina; type=EST; length=473bp
AGGGTGGAAACGGCGCCGTTCTTGCTAATTTTGATGTCAAAACACCTGAT
GCTTTCGACAACAAATACTTCTCCAATCTTAGACTCCGCAAAGGCCTTCT
GCAGAGTGATCAAGAGTTGTTTTCGACTCCTGGTGCCGATACCGCTGCCA
TTGTCGAGGACTTTGGGAGGAACCAGACTGCTTTCTTTAAAAACTTTGTG
ATCTCAATGATAAGAATGGGCAATTTGAAACCACTGACAGGAAATCAAGG
GGAGATTAGATTGAACTGCAGGAGGGTCAATGGAAACAATAATATTGCAA
CAAGATCATCATCATCGGAGGGTGATTTGGTCAGCTCTTTCTAATAAGCT
AGCTTGCGGCATATGCGAGAGAGTTTTTGTGCTTAACAAACTCGAATTTA
ATCTTATCGTTTGGCCTGAAACATGTTATGTGTTTTCAAATAAATTAACT
ATCAAACTTGAGTTTAAAAAAAA
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