DY258567
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_SYNJA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=ispG PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.877e-40 Identity = 73/173 (42.20%), Postives = 104/173 (60.12%), Query Frame = 1 Query: 286 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSLS 801 +Q Y E ++ RR TRTV VGNV IGS+HP+ VQ+M DT D+ V + R+ + G+++VR+TV A A I++ L+Q +PLVAD+H +AL VA+ DK+R+NPG F + Q + EYT E + I E F+PLV+ K +A+R G NHGSL+ Sbjct: 12 QQPYPEPVYP--RRPTRTVAVGNVLIGSQHPVVVQSMINEDTLDIDAAVAAIRRLHEAGSEIVRVTVPSMAHAKAMEAIRSKLIQTYKPVPLVADVHHNGIKIALEVAQYVDKVRINPGLFVLEKPQPGRTEYTQAELEAIRNKIRETFTPLVQTLKAQNKALRIGVNHGSLA 182 HSP 2 Score: 49.2914 bits (116), Expect = 8.877e-40 Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 3 Query: 801 DRIMN*HGDSPRGMG*SGF*FAKI--RRKLTSLILSFQ*KPTNPVVMVQANRPV*PKGKFLGWNYPFTLGMTNPGKGEKGSEKNLPLEIGTPSSE 1079 +R++ +GD+P GM S +A+I + +++LSF K + P VM+ A R + LG NYPF LG+T G GE G K+ + IGT +E Sbjct: 183 ERMLFMYGDTPEGMVESALEYAEICAEQDFHNVVLSF--KASRPQVMLAAYRLAARRFDALGLNYPFHLGVTEAGDGEYGRIKS-AVGIGTLLAE 274
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_SYNJB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. GN=ispG PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.333e-39 Identity = 72/173 (41.62%), Postives = 103/173 (59.54%), Query Frame = 1 Query: 286 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSLS 801 +Q Y E ++ RR TRTV V +V IGS+HP+ VQ+M DT DV V + R+ + G+++VR+TV A A I+ L+Q +PLVAD+H +AL VA+ DK+R+NPG F + Q + EYT E++ I E F+PLV+ K +A+R G NHGSL+ Sbjct: 12 QQPYPEPVYP--RRPTRTVAVADVLIGSQHPVVVQSMINEDTLDVDAAVAGIRRLHEAGSEIVRVTVPSMAHAKAMEAIREKLIQTYKPVPLVADVHHNGIKIALEVAKYVDKVRINPGLFVFEKPQPGRTEYTQAEFEAIRNKIRETFTPLVQTLKAQNKALRIGVNHGSLA 182 HSP 2 Score: 50.447 bits (119), Expect = 3.333e-39 Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 3 Query: 801 DRIMN*HGDSPRGMG*SGF*FAKI--RRKLTSLILSFQ*KPTNPVVMVQANRPV*PKGKFLGWNYPFTLGMTNPGKGEKGSEKNLPLEIGTPSSE 1079 +R++ +GD+P GM S FA+I + +++LSF K + P VM+ A R + LG NYPF LG+T G GE G K+ + IGT +E Sbjct: 183 ERMLFTYGDTPEGMVESALEFAQICAEQDFHNVVLSF--KASRPQVMLAAYRLAARRFDALGLNYPFHLGVTEAGDGEYGRIKS-AVGIGTLLAE 274
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTE (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlorobium tepidum GN=ispG PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.619e-38 Identity = 70/169 (41.42%), Postives = 106/169 (62.72%), Query Frame = 1 Query: 295 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSLS 801 Y ++ RR TR V G + +G PIRV++M T T D A +VE+ R+ + G +++R+TV +++A+ I+ L + + PLVADIHF+ A++ E + IR+NPGN+A A+F +YTDDEY+ EL+ + E F+PLV K + G ++R GTNHGSLS Sbjct: 66 YPAPVYSYRRRVTREVPFGTIFLGGYLPIRVESMITAHTMDTAASVEQCRRLYEAGCEIIRLTVPTEKDAENLKNIREQLRRDGIDTPLVADIHFSAKAAMKAVEFVENIRINPGNYA-TGAKFSSKDYTDDEYRAELDKVREEFTPLVRKARSLGVSMRIGTNHGSLS 233 HSP 2 Score: 39.6614 bits (91), Expect = 1.619e-38 Identity = 28/83 (33.73%), Postives = 44/83 (53.01%), Query Frame = 3 Query: 801 DRIMN*HGDSPRGMG*SGF*FAKIRRKLTSLILSFQ*KPTNPVVMVQANRPV*PKGKF-LGWNYPFTLGMTNPGKGEKGSEKN 1046 DRI++ +G+SP GM + F++I F K +N VM+QA R + + L + YP LG+T G G++G K+ Sbjct: 234 DRIVSRYGNSPEGMVEAALEFSRICEDEGYYDQLFSMKSSNVRVMIQAYRLLVARADAELRYAYPLHLGVTEAGDGDEGRIKS 316
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_SYNS3 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain CC9311) GN=ispG PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 3.605e-38 Identity = 75/177 (42.37%), Postives = 111/177 (62.71%), Query Frame = 1 Query: 274 LLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSLS 801 ++ Q+Y IH RR TRTVMVG+V IGSEHPI VQ+M DT D+ G+V ++R+AD G ++VR+T A A +I++ L + IPLVAD+H +AL VA+ DK+R+NPG F + + E++ +E+ + I+E F+PLV+ K+ +A+R G NHGSL+ Sbjct: 1 MMTASQRYDTKIH---RRVTRTVMVGDVPIGSEHPIAVQSMINEDTLDIDGSVAGILRLADAGCEIVRVTTPSIGHAKAMGKIRSALRAQGCKIPLVADVHHNGTRIALEVAKHVDKVRINPGLFVFDKPDPDRQEFSKEEFDAIGDRIKETFAPLVQVLKEQNKALRIGVNHGSLA 174 HSP 2 Score: 38.1206 bits (87), Expect = 3.605e-38 Identity = 26/82 (31.71%), Postives = 41/82 (50.00%), Query Frame = 3 Query: 801 DRIMN*HGDSPRGMG*SGF*FAKIRRKLTSLILSFQ*KPTNPVVMVQANRPV*PKGKFLGWNYPFTLGMTNPGKGEKGSEKN 1046 +R++ +GD+P+GM S F +I L + K + VM+ A R + G+NYP LG+T G G+ G K+ Sbjct: 175 ERMLFTYGDTPQGMVESAMEFVRICDSLDFHNIVISMKASRAPVMLAAYRLMADTMDREGFNYPLHLGVTEAGDGDYGRIKS 256
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_PROMP (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ispG PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 4.696e-38 Identity = 71/161 (44.10%), Postives = 104/161 (64.60%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSLS 801 RR TRTVMVG++AIGS++P+RVQ+M DT DV + + R+ + G ++VR+TV A A +IK L++ N + PLVAD+H +A+ VA+ DK+R+NPG F ++ + EYTD E++ + I + F+PLVE K +A+R G NHGSLS Sbjct: 22 RRITRTVMVGDIAIGSDYPVRVQSMINEDTMDVDNSYLAIKRLHEVGCEIVRLTVPSLAHAKAVGDIKEKLIKNNIDTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTEYTDTEFETIKKTILKRFTPLVEVLKSENKALRIGVNHGSLS 182 HSP 2 Score: 41.5874 bits (96), Expect = 4.696e-38 Identity = 27/82 (32.93%), Postives = 42/82 (51.22%), Query Frame = 3 Query: 801 DRIMN*HGDSPRGMG*SGF*FAKIRRKLTSLILSFQ*KPTNPVVMVQANRPV*PKGKFLGWNYPFTLGMTNPGKGEKGSEKN 1046 +R++ +GD+P GM S F KI +L + K + VM+ A R + + G+NYP LG+T G G+ G K+ Sbjct: 183 ERMLFTYGDTPLGMTESAMEFVKICDELDFHNIIISMKASRAPVMLAAYRMIADRLDAEGYNYPLHLGVTEAGDGDYGRIKS 264
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_SYNS9 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain CC9902) GN=ispG PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 6.118e-38 Identity = 75/172 (43.60%), Postives = 106/172 (61.63%), Query Frame = 1 Query: 289 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSLS 801 ++Y IH RR TRTVMVG+V IGSEHPI VQ+M DT D+ G+V ++R+ D G ++VR+T A A +IK L K N+PLVAD+H +AL VA+ DK+R+NPG F + + E+T+ E+ + I E F PLV+ ++ +A+R G NHGSL+ Sbjct: 6 RRYDTQIH---RRVTRTVMVGSVPIGSEHPIAVQSMINEDTLDIDGSVAGIIRLVDAGCEIVRVTTPSIGHAKAMGKIKAELSAKGCNVPLVADVHHNGTKIALEVAQHVDKVRINPGLFVFDKPDPNRQEFTESEFAEIGTRIRETFEPLVKLLREQNKALRIGVNHGSLA 174 HSP 2 Score: 38.5058 bits (88), Expect = 6.118e-38 Identity = 26/82 (31.71%), Postives = 41/82 (50.00%), Query Frame = 3 Query: 801 DRIMN*HGDSPRGMG*SGF*FAKIRRKLTSLILSFQ*KPTNPVVMVQANRPV*PKGKFLGWNYPFTLGMTNPGKGEKGSEKN 1046 +R++ +GD+P+GM S F +I L + K + VM+ A R + G+NYP LG+T G G+ G K+ Sbjct: 175 ERMLFTYGDTPKGMVESAMEFVRICDDLDFHNIVISMKASRAPVMLSAYRLMADTMDQEGFNYPLHLGVTEAGDGDYGRIKS 256
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_SYNSC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain CC9605) GN=ispG PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.482e-36 Identity = 70/172 (40.70%), Postives = 105/172 (61.05%), Query Frame = 1 Query: 289 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSLS 801 ++Y IH RR TRTVMVG+V +GSEHPI VQ+M DT D+ V ++R+A+ G+++VR+T A A +I+ L Q+ ++PLVAD+H +AL VA+ DK+R+NPG F + + E++ +E+ + I E F PLV + +A+R G NHGSL+ Sbjct: 6 RRYDTQIH---RRVTRTVMVGDVPVGSEHPIVVQSMINEDTLDIEAAVAGIIRLAEAGSEIVRVTTPSMAHAKAMGQIRKELRQRGCSVPLVADVHHNGVKIALEVAQHVDKVRINPGLFIFDKPDPNRQEFSPEEFAAIGQRIRETFEPLVTLLRDQNKALRIGVNHGSLA 174 HSP 2 Score: 38.891 bits (89), Expect = 5.482e-36 Identity = 26/82 (31.71%), Postives = 41/82 (50.00%), Query Frame = 3 Query: 801 DRIMN*HGDSPRGMG*SGF*FAKIRRKLTSLILSFQ*KPTNPVVMVQANRPV*PKGKFLGWNYPFTLGMTNPGKGEKGSEKN 1046 +R++ +GD+P GM S F +I +L + K + VM+ A R + G+NYP LG+T G G+ G K+ Sbjct: 175 ERMLFTYGDTPEGMVESAMEFVRICHELDFHNILISMKASRAPVMLAAYRLMADTMDKEGFNYPLHLGVTEAGDGDYGRIKS 256
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_ANASP (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Anabaena sp. (strain PCC 7120) GN=ispG PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.211e-35 Identity = 66/161 (40.99%), Postives = 99/161 (61.49%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSLS 801 RRKTR V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV A A EIK L++ ++P+VAD+H +AL VA+ +K+R+NPG + + + EYT E+++ E I E +PLV + G+A+R G NHGSL+ Sbjct: 25 RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSIAHAVALAEIKQKLIKTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNTNRTEYTQAEFEEIGEKIRETLAPLVITLRDQGKAMRIGVNHGSLA 185 HSP 2 Score: 41.5874 bits (96), Expect = 1.211e-35 Identity = 28/82 (34.15%), Postives = 41/82 (50.00%), Query Frame = 3 Query: 801 DRIMN*HGDSPRGMG*SGF*FAKIRRKLTSLILSFQ*KPTNPVVMVQANRPV*PKGKFLGWNYPFTLGMTNPGKGEKGSEKN 1046 +R++ +GD+P GM S F +I L + K + VMV A R + + LG +YP LG+T G GE G K+ Sbjct: 186 ERMLFTYGDTPEGMVESALEFIRICESLDFRNIVISMKASRVPVMVAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGRIKS 267
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_THEEB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispG PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.211e-35 Identity = 64/162 (39.51%), Postives = 96/162 (59.26%), Query Frame = 1 Query: 319 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSLS 801 VRRKTR V +G+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV A A EI++ L + +PLVAD+H +AL VA+ D +R+NPG + + + + EYT E+ + I E PLV + G+++R G NHGSL+ Sbjct: 18 VRRKTRPVPIGSVVIGGGHPVAVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVTVPSLAHAKAMEEIRDRLYKTYKPVPLVADVHHNGMKIALEVAKYVDNVRINPGLYVFEKPKPNRTEYTQAEFDEIGAKIRETLEPLVISLRDQGKSMRIGVNHGSLA 179 HSP 2 Score: 46.595 bits (109), Expect = 1.211e-35 Identity = 29/82 (35.37%), Postives = 42/82 (51.22%), Query Frame = 3 Query: 801 DRIMN*HGDSPRGMG*SGF*FAKIRRKLTSLILSFQ*KPTNPVVMVQANRPV*PKGKFLGWNYPFTLGMTNPGKGEKGSEKN 1046 +R++ +GD+P GM S F +I L L K + VM+ ANR + + LG +YP LG+T G GE G K+ Sbjct: 180 ERMLFTYGDTPEGMVESALEFIRICESLNFYNLEISLKASRVPVMIAANRLMVKRMDELGMDYPLHLGVTEAGDGEYGRIKS 261
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_ANAVT (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispG PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.055e-35 Identity = 66/161 (40.99%), Postives = 98/161 (60.87%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSLS 801 RRKTR V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV A A EIK L+ ++P+VAD+H +AL VA+ +K+R+NPG + + + EYT E+++ E I E +PLV + G+A+R G NHGSL+ Sbjct: 25 RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSIAHAVALAEIKQKLITTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNTNRTEYTQAEFEEIGEKIRETLAPLVITLRDQGKAMRIGVNHGSLA 185 HSP 2 Score: 41.5874 bits (96), Expect = 2.055e-35 Identity = 28/82 (34.15%), Postives = 41/82 (50.00%), Query Frame = 3 Query: 801 DRIMN*HGDSPRGMG*SGF*FAKIRRKLTSLILSFQ*KPTNPVVMVQANRPV*PKGKFLGWNYPFTLGMTNPGKGEKGSEKN 1046 +R++ +GD+P GM S F +I L + K + VMV A R + + LG +YP LG+T G GE G K+ Sbjct: 186 ERMLFTYGDTPEGMVESALEFIRICESLDFRNIVISMKASRVPVMVAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGRIKS 267 The following BLAST results are available for this feature:
BLAST of DY258567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 428
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258567 ID=DY258567; Name=DY258567; organism=Citrus clementina; type=EST; length=1244bpback to top |