DY258567
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_DEHSB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Dehalococcoides sp. (strain BAV1) GN=ispG PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.244e-12 Identity = 37/111 (33.33%), Postives = 63/111 (56.76%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL-RVAECFDKIRVNPGNFAD 651 RR++ + +GN+ IG PI VQ+MT DT+++ T+ ++ + + G +++R+ + A A I+ IP+VADIHF +AL ++ D +R+NPGN D Sbjct: 4 RRQSTEIRLGNLTIGGSAPISVQSMTKTDTRNIPATIAQIKELEECGCEIIRLAIPDMEAASALKSIR-----PKVKIPIVADIHFDYRLALASLSAGVDGLRLNPGNIGD 109
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_SALAI (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Salinispora arenicola (strain CNS-205) GN=ispG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.817e-11 Identity = 37/108 (34.26%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 642 RR +R +MVG V +G P+ VQ+MTT T DV T++++ + G +VR+ V + + +A + + +P++ADIHF P E +RVNPGN Sbjct: 19 RRASRQIMVGPVPVGGGAPVSVQSMTTTLTADVNATLQQIAELTAAGCQIVRVAVPSQDDVEAL-----PAIARKSQLPVIADIHFQPRYVFAAIEAGCAAVRVNPGN 121
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_BORPE (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bordetella pertussis GN=ispG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.817e-11 Identity = 49/167 (29.34%), Postives = 73/167 (43.71%), Query Frame = 1 Query: 322 RRKTRTVMVG----NVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 RR TR V V V +G + VQ+MT DT D T +V +A G+++VRITV A I+ L + +PLV D H+ L A+ K R+NPGN + + ++ F+ ++E ++ + VR G N GSL Sbjct: 24 RRATRAVRVQWGGRTVTVGGNASVVVQSMTNTDTADAVATAIQVKELAQAGSEIVRITVNTPEAAREVATIREQLDRMGVEVPLVGDFHYNGHKLLTQFPECAQALSKYRINPGNMGGGKQR------------------DDNFAQMIEVACRHDKPVRIGVNWGSL 172
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_BORPA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bordetella parapertussis GN=ispG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.817e-11 Identity = 49/167 (29.34%), Postives = 73/167 (43.71%), Query Frame = 1 Query: 322 RRKTRTVMVG----NVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 RR TR V V V +G + VQ+MT DT D T +V +A G+++VRITV A I+ L + +PLV D H+ L A+ K R+NPGN + + ++ F+ ++E ++ + VR G N GSL Sbjct: 24 RRATRAVRVQWGGRTVTVGGNASVVVQSMTNTDTADAVATAIQVKELAQAGSEIVRITVNTPEAAREVAAIREQLDRMGVEVPLVGDFHYNGHKLLTQFPECAQALSKYRINPGNMGGGKRR------------------DDNFAQMIEVACRHDKPVRIGVNWGSL 172
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_BORBR (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bordetella bronchiseptica GN=ispG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.817e-11 Identity = 49/167 (29.34%), Postives = 73/167 (43.71%), Query Frame = 1 Query: 322 RRKTRTVMVG----NVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 RR TR V V V +G + VQ+MT DT D T +V +A G+++VRITV A I+ L + +PLV D H+ L A+ K R+NPGN + + ++ F+ ++E ++ + VR G N GSL Sbjct: 24 RRATRAVRVQWGGRTVTVGGNASVVVQSMTNTDTADAVATAIQVKELAQAGSEIVRITVNTPEAAREVAAIREQLDRMGVEVPLVGDFHYNGHKLLTQFPECAQALSKYRINPGNMGGGKRR------------------DDNFAQMIEVACRHDKPVRIGVNWGSL 172
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_SALTO (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=ispG PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.373e-11 Identity = 37/108 (34.26%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 642 RR +R +MVG+V +G P+ VQ+MTT T DV T++++ + G +VR+ V + + A + + +P++ADIHF P E +RVNPGN Sbjct: 19 RRASRQIMVGSVPVGGGAPVSVQSMTTTLTADVNATLQQIAELTAAGCQIVRVAVPSQDDVAAL-----PAIARKSQLPVIADIHFQPRYVFAAIEAGCAAVRVNPGN 121
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_THEAB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermosipho africanus (strain TCF52B) GN=ispG PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.047e-11 Identity = 44/157 (28.03%), Postives = 77/157 (49.04%), Query Frame = 1 Query: 331 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 T+ + + NV IG ++ I +Q+MT T+D+ T++++ + + G +LVR++ A A + K IP++ADIHF +A+ + K+R+NPGN +DE KE +++ K+Y +R G N GS+ Sbjct: 2 TKEINIKNVKIGGKNSIVIQSMTNTKTEDIKSTLQQIQNLYNAGCELVRVSAPTFEAAKAL-----KTITKESPIPVIADIHFDYKLAIESIKNGASKVRINPGNIG------------NDEKVKE----------IIKVAKEYNVPIRVGANSGSI 131
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_MYCGA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Mycoplasma gallisepticum GN=ispG PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 6.904e-11 Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADR 654 R KT+ V VG+V IG ++ I +Q+MT TK V +++E+ + +GADLVRI V + A I+ + Q P++ADIHF P A+ + KIR+NPGN + Sbjct: 4 RTKTKKVFVGDVQIGGQNKIVLQSMTIAKTKHVKKSLKEINDLVKEGADLVRIAVFDDADKRA---IRKVVDQS--PCPIIADIHFNPDYAIAAIKAGCKKIRLNPGNIKSK 110 The following BLAST results are available for this feature:
BLAST of DY258567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 428
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258567 ID=DY258567; Name=DY258567; organism=Citrus clementina; type=EST; length=1244bpback to top |