DY258567
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_PSEA8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas aeruginosa (strain LESB58) GN=ispG PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 7.359e-21 Identity = 57/117 (48.72%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 304 SIHKT---VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 642 SIH +RRK+R + VGNV +G + PI VQ+MT +T DVA TV ++ R+ D GAD+VR++V A+A +IK + N+PLVADIHF +ALRVAE D +R+NPGN Sbjct: 2 SIHSASPIIRRKSRKIWVGNVPVGGDAPIAVQSMTNTETCDVAATVAQIRRLEDAGADIVRVSVPDMDAAEAFGKIK-----QQVNVPLVADIHFDYRIALRVAELGVDCLRINPGN 113
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_NITWN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=ispG PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 7.359e-21 Identity = 63/165 (38.18%), Postives = 87/165 (52.73%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVAECFDKIRVNPGN--FADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 R KT VMVGNVA+G PI VQ+MT DT D+ GT+ +V ++ G+++VR+TV A A I++ L ++ PL+ D H+ L AE DK R+NPGN F D+R ++ F+ +VE KYG+AVR G N GSL Sbjct: 18 RHKTTQVMVGNVAVGGGAPIVVQSMTNTDTADIEGTIAQVAALSRAGSEMVRMTVDRDEAAAAVPHIRDGLRKRGITTPLIGDFHYIGHKLLADHPSCAEALDKYRINPGNVGFKDKR--------------------DKQFTDIVETAIKYGKAVRIGANWGSL 162
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_THETH (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermus thermophilus GN=ispG PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 9.611e-21 Identity = 61/164 (37.20%), Postives = 83/164 (50.61%), Query Frame = 1 Query: 319 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALR----VAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 +RR T TV VG V IG HPI VQ+MT T+DV T +V+ + G+++VR+TV + A A EIK L+ + +PLV D HF + LR +AE DK R+NPG R H +E F+ ++ G+ VR G N GSL Sbjct: 4 MRRPTPTVYVGRVPIGGAHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRGR------------------HKDEHFAEMIRIAMDLGKPVRIGANWGSL 149
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_THET2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=ispG PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 9.611e-21 Identity = 61/164 (37.20%), Postives = 83/164 (50.61%), Query Frame = 1 Query: 319 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALR----VAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 +RR T TV VG V IG HPI VQ+MT T+DV T +V+ + G+++VR+TV + A A EIK L+ + +PLV D HF + LR +AE DK R+NPG R H +E F+ ++ G+ VR G N GSL Sbjct: 4 MRRPTPTVYVGRVPIGGAHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRGR------------------HKDEHFAEMIRIAMDLGKPVRIGANWGSL 149
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_THET8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=ispG PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.255e-20 Identity = 61/164 (37.20%), Postives = 83/164 (50.61%), Query Frame = 1 Query: 319 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALR----VAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 +RR T TV VG V IG HPI VQ+MT T+DV T +V+ + G+++VR+TV + A A EIK L+ + +PLV D HF + LR +AE DK R+NPG R H +E F+ ++ G+ VR G N GSL Sbjct: 4 MRRPTPTVYVGRVPIGGAHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGAEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRGR------------------HKDEHFAEMIRIAMDLGKPVRIGANWGSL 149
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_PSEA7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas aeruginosa (strain PA7) GN=ispG PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.639e-20 Identity = 57/117 (48.72%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 304 SIHKT---VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 642 SIH RRK+R + VGNV +G + PI VQ+MT +T DVA TV ++ R+ D GAD+VR++V A+A +IK + N+PLVADIHF +ALRVAE D +R+NPGN Sbjct: 2 SIHSASPITRRKSRKIWVGNVPVGGDAPIAVQSMTNTETCDVAATVAQIRRLEDAGADIVRVSVPDMDAAEAFGKIK-----QQVNVPLVADIHFDYRIALRVAELGVDCLRINPGN 113
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_PSEMY (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas mendocina (strain ymp) GN=ispG PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.141e-20 Identity = 66/169 (39.05%), Postives = 89/169 (52.66%), Query Frame = 1 Query: 295 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 +CES K RR +R + VG+V +G + PI VQ+MT DT DVA TV ++ R+ D GAD+VR++V A+A IK + +PLVADIHF +ALRVAE D +R+NPGN E+ +VE + G +R G N GSL Sbjct: 2 HCESPIK--RRLSRKIWVGSVPVGGDAPIAVQSMTNTDTNDVAATVAQIRRLEDAGADIVRVSVPDMDAAEAFGRIK-----QQVRVPLVADIHFDYQIALRVAELGVDCLRINPGNIGR----------------------EDRVKAVVEAARDKGIPIRIGVNAGSL 141
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_NITHX (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=ispG PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.141e-20 Identity = 63/165 (38.18%), Postives = 87/165 (52.73%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVAECFDKIRVNPGN--FADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 R KT VMVG++A+G PI VQ+MT DT DV GT+ +V ++ G+++VRITV A A I++ L ++ PL+ D H+ L AE DK R+NPGN F D+R ++ F+ +VE KYG+AVR G N GSL Sbjct: 18 RHKTTQVMVGSIAVGGGAPIVVQSMTNTDTADVEGTIAQVAALSRAGSEMVRITVDRDEAAAAVPHIRDGLRKRGIATPLIGDFHYIGHKLLADHPACAEALDKYRINPGNVGFKDKR--------------------DKQFTDIVEMAIKYGKAVRIGANWGSL 162
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_THETN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermoanaerobacter tengcongensis GN=ispG PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.796e-20 Identity = 61/161 (37.89%), Postives = 87/161 (54.04%), Query Frame = 1 Query: 319 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 +R+ TR + +GN IG +PI VQ+MT DT DV TVE++ R+ ++G D++R+ V ++ A + EIK K+ NIPLVADIHF +A++ + DKIR+NPGN EE +VE K+ G +R G N GSL Sbjct: 4 MRKLTREIKIGNKKIGGNNPILVQSMTNTDTHDVEKTVEQIKRLEEEGCDIIRVAVPDEKAAYSIKEIK-----KHINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGR----------------------EENIKKVVEAAKERGIPIRIGVNAGSL 137
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_RHOPB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=ispG PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.796e-20 Identity = 64/163 (39.26%), Postives = 84/163 (51.53%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 R KT VMVG+VA+G PI VQ+MT DT DVAGTVE+V + G++LVRITV + A A I++ L ++ PL+ D H+ L AE DK R+NPGN + + Q F+ +VE K +AVR G N GSL Sbjct: 18 RHKTTQVMVGDVAVGGGAPIVVQSMTNTDTADVAGTVEQVAALTRAGSELVRITVDREEAAAAVPHIRDALRKRGITTPLIGDFHYIGHKLLADYPACAEALDKYRINPGNVGFKNKRDSQ------------------FADIVEIAIKNNKAVRIGANWGSL 162 The following BLAST results are available for this feature:
BLAST of DY258567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 428
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258567 ID=DY258567; Name=DY258567; organism=Citrus clementina; type=EST; length=1244bpback to top |