DY258567
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_PSEE4 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas entomophila (strain L48) GN=ispG PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.796e-20 Identity = 62/160 (38.75%), Postives = 86/160 (53.75%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V A+A +IK K ++PLVADIHF +ALRVAE D +R+NPGN E+ +V+ + G +R G N GSL Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDAAEAFGKIK-----KLVSVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR----------------------EDRVRAVVDAARDRGIPIRIGVNAGSL 141
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_NITSB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Nitratiruptor sp. (strain SB155-2) GN=ispG PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.796e-20 Identity = 64/159 (40.25%), Postives = 87/159 (54.72%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 R T+ + VG+VA+G + PI VQ+MT + T DV TVE++ R+ GAD+VR+ V + +A A EIK K ++PLVADIHF +AL AE D IR+NPGN + E I+EV V+ CK+ +R G N GSL Sbjct: 3 RYPTKKIFVGDVAVGGDAPISVQSMTFSKTADVEATVEQINRLHFAGADIVRVAVPEEEDAKALKEIK-----KRTSLPLVADIHFNYRLALIAAEVVDCIRINPGNIGSK------------------ERIKEV----VKACKERNIPIRIGVNAGSL 134
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_PSEPK (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas putida (strain KT2440) GN=ispG PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 3.652e-20 Identity = 61/160 (38.12%), Postives = 86/160 (53.75%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN E+ +V+ + G +R G N GSL Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDAAEAFGKIK-----QRVSVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR----------------------EDRVRAVVDAARDRGIPIRIGVNAGSL 141
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_PSEPG (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas putida (strain GB-1) GN=ispG PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 3.652e-20 Identity = 61/160 (38.12%), Postives = 86/160 (53.75%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN E+ +V+ + G +R G N GSL Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDAAEAFGKIKQLV-----SVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR----------------------EDRVRAVVDAARDRGIPIRIGVNAGSL 141
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_PSEP1 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ispG PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 3.652e-20 Identity = 61/160 (38.12%), Postives = 86/160 (53.75%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN E+ +V+ + G +R G N GSL Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDAAEAFGKIK-----QRVSVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR----------------------EDRVRAVVDAARDRGIPIRIGVNAGSL 141
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_PSEPW (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas putida (strain W619) GN=ispG PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 4.770e-20 Identity = 61/160 (38.12%), Postives = 86/160 (53.75%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN E+ +V+ + G +R G N GSL Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVGQIQRLVDAGVDIVRVSVPDMDAAEAFGKIKQLV-----SVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR----------------------EDRVRAVVDAARDRGIPIRIGVNAGSL 141
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_ALCBS (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=ispG PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 6.230e-20 Identity = 62/163 (38.04%), Postives = 87/163 (53.37%), Query Frame = 1 Query: 313 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 K RRKTR VMVGNV +G + PI VQ+MT ++T DV TV ++ R+ D G D+VR++V A+A +I+ K ++PLVADIH+ +AL VAE D +R+NPGN E+ +++ K G +R G N GSL Sbjct: 6 KIERRKTRQVMVGNVPVGGDAPISVQSMTNSETCDVDATVGQIRRLQDAGVDIVRVSVPSMEAAEAFGKIR-----KQVDVPLVADIHYDYKIALAVAEQGVDCLRINPGNIGR----------------------EDRIKAVIQCAKDKGLPIRIGVNAGSL 141
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_BACCR (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=ispG PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 8.136e-20 Identity = 65/162 (40.12%), Postives = 84/162 (51.85%), Query Frame = 1 Query: 316 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN R +E V V K+ G +R G N GSL Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIGRR------------------HKVEAV----VNAAKERGIPIRIGVNAGSL 139
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_BACC4 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus cereus (strain B4264) GN=ispG PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 8.136e-20 Identity = 65/162 (40.12%), Postives = 84/162 (51.85%), Query Frame = 1 Query: 316 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN R +E V V K+ G +R G N GSL Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIGRR------------------HKVEAV----VNAAKERGIPIRIGVNAGSL 139
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_BACC2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus cereus (strain G9842) GN=ispG PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 8.136e-20 Identity = 65/162 (40.12%), Postives = 84/162 (51.85%), Query Frame = 1 Query: 316 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798 T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN R +E V V K+ G +R G N GSL Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIGRR------------------HKVEAV----VNAAKERGIPIRIGVNAGSL 139 The following BLAST results are available for this feature:
BLAST of DY258567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 428
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258567 ID=DY258567; Name=DY258567; organism=Citrus clementina; type=EST; length=1244bpback to top |