DY258567

Overview
NameDY258567
Unique NameDY258567
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1244
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_BRASO (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bradyrhizobium sp. (strain ORS278) GN=ispG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.092e-19
Identity = 63/165 (38.18%), Postives = 82/165 (49.70%), Query Frame = 1 
Query:  322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVAECFDKIRVNPGN--FADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798
            R +T  VMVGNVA+G   PI VQ+MT  DT DV  TV +V  +A  G+++VRITV     A A   I+  L ++    PL+ D H+     L      AE   K R+NPGN  F D+R                    +  FS ++E   KYG+ VR G N GSL
Sbjct:   22 RHQTTKVMVGNVAVGGGAPIVVQSMTNTDTADVDSTVAQVAALARAGSEMVRITVDRDEAAAAVPHIREQLDKRGITTPLIGDFHYIGHKLLTEYPACAEALAKYRINPGNVGFKDKR--------------------DTQFSTIIELANKYGKPVRIGANWGSL 166
[Close]
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_BACHK (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus thuringiensis subsp. konkukian GN=ispG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.092e-19
Identity = 64/162 (39.51%), Postives = 84/162 (51.85%), Query Frame = 1 
Query:  316 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798
            T R KTR V VGN+ IG  + + +Q+MTT  T DV  TV E+ R+ + G  +VR+ V  +R A+A  +IK     K  NIPLVADIHF   +AL+  E   DK+R+NPGN   R                    +E V    V   K+ G  +R G N GSL
Sbjct:    5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIGRR------------------HKVEAV----VNAAKERGIPIRIGVNAGSL 139
[Close]
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_BACCZ (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus cereus (strain ZK / E33L) GN=ispG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.092e-19
Identity = 64/162 (39.51%), Postives = 84/162 (51.85%), Query Frame = 1 
Query:  316 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798
            T R KTR V VGN+ IG  + + +Q+MTT  T DV  TV E+ R+ + G  +VR+ V  +R A+A  +IK     K  NIPLVADIHF   +AL+  E   DK+R+NPGN   R                    +E V    V   K+ G  +R G N GSL
Sbjct:    5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIGRR------------------HKVEAV----VNAAKERGIPIRIGVNAGSL 139
[Close]
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_BACCQ (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus cereus (strain Q1) GN=ispG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.092e-19
Identity = 64/162 (39.51%), Postives = 84/162 (51.85%), Query Frame = 1 
Query:  316 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798
            T R KTR V VGN+ IG  + + +Q+MTT  T DV  TV E+ R+ + G  +VR+ V  +R A+A  +IK     K  NIPLVADIHF   +AL+  E   DK+R+NPGN   R                    +E V    V   K+ G  +R G N GSL
Sbjct:    2 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIGRR------------------HKVEAV----VNAAKERGIPIRIGVNAGSL 136
[Close]
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_BACC7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus cereus (strain AH187) GN=ispG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.092e-19
Identity = 64/162 (39.51%), Postives = 84/162 (51.85%), Query Frame = 1 
Query:  316 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798
            T R KTR V VGN+ IG  + + +Q+MTT  T DV  TV E+ R+ + G  +VR+ V  +R A+A  +IK     K  NIPLVADIHF   +AL+  E   DK+R+NPGN   R                    +E V    V   K+ G  +R G N GSL
Sbjct:    5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIGRR------------------HKVEAV----VNAAKERGIPIRIGVNAGSL 139
[Close]
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_BACC3 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus cereus (strain 03BB102) GN=ispG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.092e-19
Identity = 64/162 (39.51%), Postives = 84/162 (51.85%), Query Frame = 1 
Query:  316 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798
            T R KTR V VGN+ IG  + + +Q+MTT  T DV  TV E+ R+ + G  +VR+ V  +R A+A  +IK     K  NIPLVADIHF   +AL+  E   DK+R+NPGN   R                    +E V    V   K+ G  +R G N GSL
Sbjct:    5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIGRR------------------HKVEAV----VNAAKERGIPIRIGVNAGSL 139
[Close]
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_BACC1 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus cereus (strain ATCC 10987) GN=ispG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.092e-19
Identity = 64/162 (39.51%), Postives = 84/162 (51.85%), Query Frame = 1 
Query:  316 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798
            T R KTR V VGN+ IG  + + +Q+MTT  T DV  TV E+ R+ + G  +VR+ V  +R A+A  +IK     K  NIPLVADIHF   +AL+  E   DK+R+NPGN   R                    +E V    V   K+ G  +R G N GSL
Sbjct:    2 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIGRR------------------HKVEAV----VNAAKERGIPIRIGVNAGSL 136
[Close]
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_BACC0 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus cereus (strain AH820) GN=ispG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.092e-19
Identity = 64/162 (39.51%), Postives = 84/162 (51.85%), Query Frame = 1 
Query:  316 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798
            T R KTR V VGN+ IG  + + +Q+MTT  T DV  TV E+ R+ + G  +VR+ V  +R A+A  +IK     K  NIPLVADIHF   +AL+  E   DK+R+NPGN   R                    +E V    V   K+ G  +R G N GSL
Sbjct:    5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIGRR------------------HKVEAV----VNAAKERGIPIRIGVNAGSL 139
[Close]
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_BACAN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus anthracis GN=ispG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.092e-19
Identity = 64/162 (39.51%), Postives = 84/162 (51.85%), Query Frame = 1 
Query:  316 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798
            T R KTR V VGN+ IG  + + +Q+MTT  T DV  TV E+ R+ + G  +VR+ V  +R A+A  +IK     K  NIPLVADIHF   +AL+  E   DK+R+NPGN   R                    +E V    V   K+ G  +R G N GSL
Sbjct:    2 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIGRR------------------HKVEAV----VNAAKERGIPIRIGVNAGSL 136
[Close]
BLAST of DY258567 vs. ExPASy Swiss-Prot
Match: ISPG_BACAH (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus thuringiensis (strain Al Hakam) GN=ispG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.092e-19
Identity = 64/162 (39.51%), Postives = 84/162 (51.85%), Query Frame = 1 
Query:  316 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCKKYGRAVRNGTNHGSL 798
            T R KTR V VGN+ IG  + + +Q+MTT  T DV  TV E+ R+ + G  +VR+ V  +R A+A  +IK     K  NIPLVADIHF   +AL+  E   DK+R+NPGN   R                    +E V    V   K+ G  +R G N GSL
Sbjct:    5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIGRR------------------HKVEAV----VNAAKERGIPIRIGVNAGSL 139
The following BLAST results are available for this feature:
BLAST of DY258567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 428
Match NameE-valueIdentityDescription
ISPG_BRASO3.092e-1938.184-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACHK3.092e-1939.514-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACCZ3.092e-1939.514-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACCQ3.092e-1939.514-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACC73.092e-1939.514-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACC33.092e-1939.514-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACC13.092e-1939.514-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACC03.092e-1939.514-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACAN3.092e-1939.514-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACAH3.092e-1939.514-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BF11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258567 ID=DY258567; Name=DY258567; organism=Citrus clementina; type=EST; length=1244bp
CACATTTCTCTCTCAGAGTTAGTTCTCACTTCTCAGCATTATAAAAGGTA
GGCGTAGTATTTTGCAAAGATGGCGACTGGAACCCTGCCCGCTTCGTTTC
CGGGCCTAAAGAGCAGAGACTCGGGCTTGGGGTTTGCGAAAAGTGTGGAT
TTTGTGAGAGTTTGTGATTTCAGAAAGTTCAAGTCTGGCAGAAGAAGATT
CACTGTGATAAGGAATTCATCAAATTCCAGTTCGGATATCGCTGAGCTTC
AGCCTGCATCAGAAGGAAGCCCCCTATTAGTTCCAAGACAAAAGTATTGT
GAATCCATTCACAAAACTGTCAGAAGGAAGACACGGACGGTGATGGTGGG
AAATGTAGCCATTGGCAGTGAGCATCCTATTAGAGTTCAAACAATGACTA
CAAATGACACTAAGGATGTTGCTGGAACAGTGGAAGAGGTAATGAGAATA
GCAGACCAGGGAGCAGATCTTGTTCGGATCACAGTTCAAGGGAAGAGAGA
GGCAGATGCATGTTTTGAGATAAAAAACACACTTGTCCAGAAAAACTACA
ATATACCTCTGGTGGCAGATATTCATTTTGCCCCTTCTGTTGCTCTACGA
GTTGCTGAATGCTTTGACAAAATCCGTGTCAACCCAGGAAATTTTGCTGA
TAGACGGGCTCAGTTTCAGCAGCTAGAGTACACAGACGATGAGTATCAGA
AAGAACTTGAGCATATTGAGGAGGTTTTTAGTCCATTGGTTGAGAAATGT
AAAAAGTACGGAAGGGCAGTGCGTAATGGGACTAACCATGGGAGCCTTTC
GATCGTATCATGAACTAACATGGGGATTCTCCTAGGGGAATGGGTTAATC
TGGCTTTTAATTTGCAAAAATCCGCCGAAAATTGACTTCCTTAATTTTGT
CTTTTCAATGAAAACCAACAAACCCAGTCGTAATGGTCCAAGCAAACCGT
CCGGTGTAACCGAAAGGTAAGTTTCTGGGTTGGAATTACCCTTTCACTTT
GGGAATGACCAACCCCGGGAAAGGGGAAAAAGGGTCCGAAAAAAACCTCC
CATTGGAAATTGGTACCCCTTCTTCAGAGTTGGTTTTGGGGTAAAAAACT
CAGGGGGTTTCCCTTTTAAGCACCCCCCCCAAAAAAAAAAGAAAATGTCC
CCCCTTTTTAAAAAAAGGGGTTCCGCCCCACCCCCTTGTTGAATAAAAAA
AAAACACACCTGCTTTAATTTCCTTCCTCCCACAAAAAAGGAAG
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