DY258622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_ANASP (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Anabaena sp. (strain PCC 7120) GN=ispG PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 2.585e-24 Identity = 61/159 (38.36%), Postives = 92/159 (57.86%), Query Frame = 1 Query: 322 RRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPGNFADRRAQFQHLEYTDDDYQKELEHIEEVFSPLVEKC*KYRKAVRIGTNPGN 795 RR T+ V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV A A EIK L++ ++P+VAD+H +AL VA +K+R+NPG + + EYT ++++ E I E +PLV KA+RIG N G+ Sbjct: 25 RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSIAHAVALAEIKQKLIKTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNTNRTEYTQAEFEEIGEKIRETLAPLVITLRDQGKAMRIGVNHGS 183
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_ANAVT (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispG PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 4.410e-24 Identity = 61/159 (38.36%), Postives = 91/159 (57.23%), Query Frame = 1 Query: 322 RRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPGNFADRRAQFQHLEYTDDDYQKELEHIEEVFSPLVEKC*KYRKAVRIGTNPGN 795 RR T+ V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV A A EIK L+ ++P+VAD+H +AL VA +K+R+NPG + + EYT ++++ E I E +PLV KA+RIG N G+ Sbjct: 25 RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSIAHAVALAEIKQKLITTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNTNRTEYTQAEFEEIGEKIRETLAPLVITLRDQGKAMRIGVNHGS 183
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_SYNP2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ispG PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 5.760e-24 Identity = 61/159 (38.36%), Postives = 90/159 (56.60%), Query Frame = 1 Query: 322 RRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPGNFADRRAQFQHLEYTDDDYQKELEHIEEVFSPLVEKC*KYRKAVRIGTNPGN 795 RR T+ V VGNV IGS++P+ VQ+M DT D+ G+V + R+ + G ++VR+TV A + +IK L + +P+VAD+H +AL VA DK+R+NPG + +A YT+ ++ E I E PLV KA+RIG N G+ Sbjct: 21 RRKTRAVKVGNVTIGSDYPVVVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVTVPSMAHARSLAQIKAKLAETYQAVPIVADVHHNGMKIALEVAKHVDKVRINPGLYVFEQASGDRTGYTEAEFAAIGEKIRETLEPLVVSLRDQGKAMRIGVNHGS 179
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_PROMA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Prochlorococcus marinus GN=ispG PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 7.523e-24 Identity = 61/159 (38.36%), Postives = 88/159 (55.35%), Query Frame = 1 Query: 322 RRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPGNFADRRAQFQHLEYTDDDYQKELEHIEEVFSPLVEKC*KYRKAVRIGTNPGN 795 RR T++VMVGN+ IGS++P+ VQ+M DT D+ + + R+ + G ++VR+TV A A EIK L Q +PLVAD+H +AL VA DK+R+NPG F E+++ + E I F P+V KA+RIG N G+ Sbjct: 24 RRKTRSVMVGNIGIGSDYPVAVQSMINEDTLDIEASTSAIRRLHEIGCEIVRLTVPSLSHAKAVGEIKRRLEQNYLPVPLVADVHHNGMKIALEVAKHVDKVRINPGLFVFSNPDPSRTEFSNSEISAIKEKIINNFEPIVNTLKAQNKALRIGVNHGS 182
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_ACAM1 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Acaryochloris marina (strain MBIC 11017) GN=ispG PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 7.523e-24 Identity = 60/159 (37.74%), Postives = 88/159 (55.35%), Query Frame = 1 Query: 322 RRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPGNFADRRAQFQHLEYTDDDYQKELEHIEEVFSPLVEKC*KYRKAVRIGTNPGN 795 RR T+ V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV A A IK L +PLVAD+H +AL VA DK+R+NPG + +A+ E++ +++ + I E PLV KA+RIG N G+ Sbjct: 24 RRKTRPVPVGDVIIGGGHPVVVQSMINEDTLDIEGSVAAIRRLHELGCEIVRVTVPSMAHAKALATIKEKLTATYQTVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKAKDDRTEFSQSEFENIGDKIRETLEPLVVSLRDQNKAMRIGVNHGS 182
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_TRIEI (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Trichodesmium erythraeum (strain IMS101) GN=ispG PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 9.825e-24 Identity = 64/184 (34.78%), Postives = 101/184 (54.89%), Query Frame = 1 Query: 247 LQPASKRSPLLIPRQKYCESIHKTVRRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPGNFADRRAQFQHLEYTDDDYQKELEHIEEVFSPLVEKC*KYRKAVRIGTNPGN 795 +Q + S I + + +IH RR T++V VG++ IG HP+ VQ+M DT D+ +V + R+ + G ++VR+TV A + EIK L + +PLVAD+H +AL VA DK+R+NPG + + Q + EYT ++++ + I + PLV KA+RIG N G+ Sbjct: 1 MQTLANPSKTPINQAVFDTTIH---RRKTRSVKVGDITIGGGHPVVVQSMINEDTLDIERSVAAIRRLHEIGCEIVRVTVPSIAHAKSLGEIKQKLAETYKPVPLVADVHHNGMKIALEVAKQVDKVRINPGLYVFEKPQAERNEYTQAEFEEIGDKIRQTLKPLVVSLRDQNKAMRIGVNHGS 181
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_NOSP7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ispG PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 9.825e-24 Identity = 58/159 (36.48%), Postives = 90/159 (56.60%), Query Frame = 1 Query: 322 RRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPGNFADRRAQFQHLEYTDDDYQKELEHIEEVFSPLVEKC*KYRKAVRIGTNPGN 795 RR T+ V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV A A EIK L++ ++P+VAD+H +AL V+ +K+R+NPG + + EYT ++ + + I E PLV K++RIG N G+ Sbjct: 25 RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSMAHAKALAEIKQKLIKTYQDVPIVADVHHNGLKIALEVSKHIEKVRINPGLYVFEKPNVNRTEYTQSEFDEIGDKIRETLEPLVVSLRDQGKSMRIGVNHGS 183
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_CYAP8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Cyanothece sp. (strain PCC 8801) GN=ispG PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.283e-23 Identity = 65/184 (35.33%), Postives = 96/184 (52.17%), Query Frame = 1 Query: 247 LQPASKRSPLLIPRQKYCESIHKTVRRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPGNFADRRAQFQHLEYTDDDYQKELEHIEEVFSPLVEKC*KYRKAVRIGTNPGN 795 +Q PL ++ +IH RR T+ V VG++ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV A A EI L + +PLVAD+H +AL VA DK+R+NPG + + EYT ++ + E I E PLV KA+RIG N G+ Sbjct: 1 MQTLETPKPLTNTSPEFDTTIH---RRQTRPVKVGDITIGGGYPVVVQSMINEDTLDIEGSVAGIRRLHEIGCEIVRVTVPSMAHAKALAEINQKLAEVYRRVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFEKPSTTRSEYTQAEFDEIGEKISETLKPLVVSLRDQGKAMRIGVNHGS 181
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_SYNP6 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ispG PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.859e-23 Identity = 59/159 (37.11%), Postives = 92/159 (57.86%), Query Frame = 1 Query: 322 RRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPGNFADRRAQFQHLEYTDDDYQKELEHIEEVFSPLVEKC*KYRKAVRIGTNPGN 795 RR T++V VG++ IGS HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV A A +IK L ++PLVAD+H +AL VA DK+R+NPG + + YT +++++ + I + PLV + KA+RIG N G+ Sbjct: 20 RRPTRSVRVGDIWIGSRHPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSLGHAKAVGDIKKKLQDTYRDVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPDPNRQGYTPEEFERIGKQIRDTLEPLVTSLREQDKAMRIGVNHGS 178
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_SYNE7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus elongatus (strain PCC 7942) GN=ispG PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.859e-23 Identity = 59/159 (37.11%), Postives = 92/159 (57.86%), Query Frame = 1 Query: 322 RRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPGNFADRRAQFQHLEYTDDDYQKELEHIEEVFSPLVEKC*KYRKAVRIGTNPGN 795 RR T++V VG++ IGS HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV A A +IK L ++PLVAD+H +AL VA DK+R+NPG + + YT +++++ + I + PLV + KA+RIG N G+ Sbjct: 20 RRPTRSVRVGDIWIGSRHPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSLGHAKAVGDIKKKLQDTYRDVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPDPNRQGYTPEEFERIGKQIRDTLEPLVTSLREQDKAMRIGVNHGS 178 The following BLAST results are available for this feature:
BLAST of DY258622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 421
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258622 ID=DY258622; Name=DY258622; organism=Citrus clementina; type=EST; length=1295bpback to top |