DY258622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_PSEA8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas aeruginosa (strain LESB58) GN=ispG PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.917e-19 Identity = 54/117 (46.15%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 304 SIHKT---VRRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 SIH +RR ++ + VGNV +G + PI VQ+MT +T DVA TV ++ R+ D GAD+VR++V A+A +IK + N+PLVADIHF +ALRVA+ D +R+NPGN Sbjct: 2 SIHSASPIIRRKSRKIWVGNVPVGGDAPIAVQSMTNTETCDVAATVAQIRRLEDAGADIVRVSVPDMDAAEAFGKIK-----QQVNVPLVADIHFDYRIALRVAELGVDCLRINPGN 113
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_THETH (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermus thermophilus GN=ispG PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.271e-19 Identity = 59/163 (36.20%), Postives = 82/163 (50.31%), Query Frame = 1 Query: 319 VRRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALR----VADCFDKIRVNPGNFADRRAQFQHLEYTDDDYQKELEHIEEVFSPLVEKC*KYRKAVRIGTNPGN 795 +RR T TV VG V IG HPI VQ+MT T+DV T +V+ + G+++VR+TV + A A EIK L+ + +PLV D HF + LR +A+ DK R+NPG R H +E F+ ++ K VRIG N G+ Sbjct: 4 MRRPTPTVYVGRVPIGGAHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRGR------------------HKDEHFAEMIRIAMDLGKPVRIGANWGS 148
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_THET2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=ispG PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.271e-19 Identity = 59/163 (36.20%), Postives = 82/163 (50.31%), Query Frame = 1 Query: 319 VRRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALR----VADCFDKIRVNPGNFADRRAQFQHLEYTDDDYQKELEHIEEVFSPLVEKC*KYRKAVRIGTNPGN 795 +RR T TV VG V IG HPI VQ+MT T+DV T +V+ + G+++VR+TV + A A EIK L+ + +PLV D HF + LR +A+ DK R+NPG R H +E F+ ++ K VRIG N G+ Sbjct: 4 MRRPTPTVYVGRVPIGGAHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRGR------------------HKDEHFAEMIRIAMDLGKPVRIGANWGS 148
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_THET8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=ispG PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 4.272e-19 Identity = 59/163 (36.20%), Postives = 82/163 (50.31%), Query Frame = 1 Query: 319 VRRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALR----VADCFDKIRVNPGNFADRRAQFQHLEYTDDDYQKELEHIEEVFSPLVEKC*KYRKAVRIGTNPGN 795 +RR T TV VG V IG HPI VQ+MT T+DV T +V+ + G+++VR+TV + A A EIK L+ + +PLV D HF + LR +A+ DK R+NPG R H +E F+ ++ K VRIG N G+ Sbjct: 4 MRRPTPTVYVGRVPIGGAHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGAEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRGR------------------HKDEHFAEMIRIAMDLGKPVRIGANWGS 148
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_RHOPB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=ispG PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 4.272e-19 Identity = 63/164 (38.41%), Postives = 85/164 (51.83%), Query Frame = 1 Query: 322 RRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVADCFDKIRVNPGN--FADRRAQFQHLEYTDDDYQKELEHIEEVFSPLVEKC*KYRKAVRIGTNPGN 795 R T VMVG+VA+G PI VQ+MT DT DVAGTVE+V + G++LVRITV + A A I++ L ++ PL+ D H+ L A+ DK R+NPGN F ++R + F+ +VE K KAVRIG N G+ Sbjct: 18 RHKTTQVMVGDVAVGGGAPIVVQSMTNTDTADVAGTVEQVAALTRAGSELVRITVDREEAAAAVPHIRDALRKRGITTPLIGDFHYIGHKLLADYPACAEALDKYRINPGNVGFKNKR--------------------DSQFADIVEIAIKNNKAVRIGANWGS 161
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_PSEE4 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas entomophila (strain L48) GN=ispG PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 4.272e-19 Identity = 51/108 (47.22%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 322 RRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 RR ++ + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V A+A +IK K ++PLVADIHF +ALRVA+ D +R+NPGN Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDAAEAFGKIK-----KLVSVPLVADIHFDYKIALRVAELGVDCLRINPGN 111
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_PSEA7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas aeruginosa (strain PA7) GN=ispG PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 4.272e-19 Identity = 54/117 (46.15%), Postives = 75/117 (64.10%), Query Frame = 1 Query: 304 SIHKT---VRRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 SIH RR ++ + VGNV +G + PI VQ+MT +T DVA TV ++ R+ D GAD+VR++V A+A +IK + N+PLVADIHF +ALRVA+ D +R+NPGN Sbjct: 2 SIHSASPITRRKSRKIWVGNVPVGGDAPIAVQSMTNTETCDVAATVAQIRRLEDAGADIVRVSVPDMDAAEAFGKIK-----QQVNVPLVADIHFDYRIALRVAELGVDCLRINPGN 113
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_NITSB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Nitratiruptor sp. (strain SB155-2) GN=ispG PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 4.272e-19 Identity = 65/172 (37.79%), Postives = 93/172 (54.07%), Query Frame = 1 Query: 322 RRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADCFDKIRVNPGNFADRRAQFQHLEYTDDDYQKELEHIEEVFSPLVEKC*KYRKAVRIGTNPGNPFKSYHELQWGISS 837 R T+ + VG+VA+G + PI VQ+MT + T DV TVE++ R+ GAD+VR+ V + +A A EIK K ++PLVADIHF +AL A+ D IR+NPGN + E I+EV V+ C + +RIG N G+ K E ++G +S Sbjct: 3 RYPTKKIFVGDVAVGGDAPISVQSMTFSKTADVEATVEQINRLHFAGADIVRVAVPEEEDAKALKEIK-----KRTSLPLVADIHFNYRLALIAAEVVDCIRINPGNIGSK------------------ERIKEV----VKACKERNIPIRIGVNAGSLEKEI-EAKYGATS 146
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_PSEPK (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas putida (strain KT2440) GN=ispG PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.579e-19 Identity = 50/108 (46.30%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 322 RRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 RR ++ + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V A+A +IK + ++PLVADIHF +ALRVA+ D +R+NPGN Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDAAEAFGKIK-----QRVSVPLVADIHFDYKIALRVAELGVDCLRINPGN 111
BLAST of DY258622 vs. ExPASy Swiss-Prot
Match: ISPG_PSEPG (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas putida (strain GB-1) GN=ispG PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.579e-19 Identity = 50/108 (46.30%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 322 RRNTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 RR ++ + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V A+A +IK + ++PLVADIHF +ALRVA+ D +R+NPGN Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDAAEAFGKIKQLV-----SVPLVADIHFDYKIALRVAELGVDCLRINPGN 111 The following BLAST results are available for this feature:
BLAST of DY258622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 421
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258622 ID=DY258622; Name=DY258622; organism=Citrus clementina; type=EST; length=1295bpback to top |