DY258624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB7A_MOUSE (Ras-related protein Rab-7a OS=Mus musculus GN=Rab7a PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 3.103e-30 Identity = 69/163 (42.33%), Postives = 109/163 (66.87%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERW----LKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFA-EKENTFFMETSALESLNVENALPEV 728 L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ + VDD++V QIWDTAGQER++++ A+YRGA +LV+DVT TF+ ++ W L + N +++GNK DL + R V+T+ AQ++ K N + ETSA E++NVE A + Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB7A_HUMAN (Ras-related protein Rab-7a OS=Homo sapiens GN=RAB7A PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.103e-30 Identity = 69/163 (42.33%), Postives = 109/163 (66.87%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERW----LKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFA-EKENTFFMETSALESLNVENALPEV 728 L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ + VDD++V QIWDTAGQER++++ A+YRGA +LV+DVT TF+ ++ W L + N +++GNK DL + R V+T+ AQ++ K N + ETSA E++NVE A + Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB7A_CANFA (Ras-related protein Rab-7a OS=Canis familiaris GN=RAB7A PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.103e-30 Identity = 69/163 (42.33%), Postives = 109/163 (66.87%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERW----LKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFA-EKENTFFMETSALESLNVENALPEV 728 L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ + VDD++V QIWDTAGQER++++ A+YRGA +LV+DVT TF+ ++ W L + N +++GNK DL + R V+T+ AQ++ K N + ETSA E++NVE A + Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RBH1C_ARATH (Ras-related protein RABH1C OS=Arabidopsis thaliana GN=RABH1C PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.052e-30 Identity = 59/152 (38.82%), Postives = 105/152 (69.08%), Query Frame = 3 Query: 258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL-RDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVE 710 FK+V +GD VGK+++++RF ++F + TIG++F ++++ ++D+ V+ Q+WDTAGQER+R++ +Y R + A++VYDV+ TF N +W++++ R+ SN++I+LVGNK DL R VS + + ++ F+ETSA E+ N++ Sbjct: 10 FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIK 161
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB9A_MOUSE (Ras-related protein Rab-9A OS=Mus musculus GN=Rab9a PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.052e-30 Identity = 71/185 (38.38%), Postives = 111/185 (60.00%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD----SNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTF-FMETSALESLNVENALPEVLTQIYRVVNREALEVRDDPPTL 794 LFK++L+GD GVGKS+L++R+ N+F + TIGVEF + + VD V QIWDTAGQER+R++ + +YRG+ LL + V +F+N+ W KE + D + +++GNK D++ R VSTE+AQ++ + + + ETSA +S NV A E + +I +R ++ D L Sbjct: 7 LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDIKE-RQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSEHLIQTDTVNL 190
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB6B_MOUSE (Ras-related protein Rab-6B OS=Mus musculus GN=Rab6b PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.052e-30 Identity = 62/186 (33.33%), Postives = 117/186 (62.90%), Query Frame = 3 Query: 258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVVNRE------ALEVRDDPPTLP 797 FK+V +G+ VGK++L++RF + F ++TIG++F ++++ ++D+ V+ Q+WDTAGQER+R++ +Y R + A++VYD+T +F+ +W+ ++R S+++IMLVGNK DL R ++ E+ + A++ + F+ETSA NV+ V + + + N + ++++ D P P Sbjct: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEP 199
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB6B_HUMAN (Ras-related protein Rab-6B OS=Homo sapiens GN=RAB6B PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.052e-30 Identity = 62/186 (33.33%), Postives = 117/186 (62.90%), Query Frame = 3 Query: 258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVVNRE------ALEVRDDPPTLP 797 FK+V +G+ VGK++L++RF + F ++TIG++F ++++ ++D+ V+ Q+WDTAGQER+R++ +Y R + A++VYD+T +F+ +W+ ++R S+++IMLVGNK DL R ++ E+ + A++ + F+ETSA NV+ V + + + N + ++++ D P P Sbjct: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEP 199
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB6B_BOVIN (Ras-related protein Rab-6B OS=Bos taurus GN=RAB6B PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.052e-30 Identity = 62/186 (33.33%), Postives = 117/186 (62.90%), Query Frame = 3 Query: 258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVVNRE------ALEVRDDPPTLP 797 FK+V +G+ VGK++L++RF + F ++TIG++F ++++ ++D+ V+ Q+WDTAGQER+R++ +Y R + A++VYD+T +F+ +W+ ++R S+++IMLVGNK DL R ++ E+ + A++ + F+ETSA NV+ V + + + N + ++++ D P P Sbjct: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEP 199
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB9A_RAT (Ras-related protein Rab-9A OS=Rattus norvegicus GN=Rab9a PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 5.292e-30 Identity = 71/185 (38.38%), Postives = 111/185 (60.00%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD----SNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTF-FMETSALESLNVENALPEVLTQIYRVVNREALEVRDDPPTL 794 LFK++L+GD GVGKS+L++R+ N+F + TIGVEF + + VD V QIWDTAGQER+R++ + +YRG+ LL + V +F+N+ W KE + D + +++GNK D++ R VSTE+AQ++ + + + ETSA +S NV A E + +I +R ++ D L Sbjct: 7 LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDIKE-RQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSDHLIQTDTVNL 190
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RB27A_HUMAN (Ras-related protein Rab-27A OS=Homo sapiens GN=RAB27A PE=1 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 6.912e-30 Identity = 69/186 (37.10%), Postives = 113/186 (60.75%), Query Frame = 3 Query: 234 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVD----------DKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT-DSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVVNR 758 +D DYDYL K + +GDSGVGK+++L ++T +F+ + +T+G++F + + + + Q+WDTAGQER+R++T+A++R A+G LL++D+T +F NV W+ +L+ H N I+L GNK+DL R V E+A + AEK + ETSA N+ A+ +L I + + R Sbjct: 2 SDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMKRMER 187 The following BLAST results are available for this feature:
BLAST of DY258624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258624 ID=DY258624; Name=DY258624; organism=Citrus clementina; type=EST; length=1280bpback to top |