DY258624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RABZ_DICDI (Ras-related protein RabZ OS=Dictyostelium discoideum GN=rabZ PE=3 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 6.912e-30 Identity = 65/165 (39.39%), Postives = 106/165 (64.24%), Query Frame = 3 Query: 249 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESK-STIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQI 740 D ++ ++LIGD GKS++L RF N+F + K S I ++ T+ I+++ K + + +DTAGQE++RA++ +YYR A G +L YD+ TF+NV RWL+E+ N+ I+++ NK DL R V+ +A+ FA+ +N +E SA ESL VE A ++ ++I Sbjct: 48 DDVYTIILIGDQATGKSSVLQRFKNNQFEVCHKPSPIIIDCFTKKIQIEGKKISLKCYDTAGQEKFRALSQSYYRCADGIMLFYDIANQKTFDNVGRWLEEVHRLAGPNVPILIIANKCDLNEKRVVNFNNAKKFADDKNIPIIEVSAKESLGVEEAFIKLASEI 212
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RASEF_MOUSE (RAS and EF-hand domain-containing protein homolog OS=Mus musculus GN=Rasef PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 9.027e-30 Identity = 70/167 (41.92%), Postives = 100/167 (59.88%), Query Frame = 3 Query: 258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHL------RAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQI 740 +K+VL GD+ VGKS+ L R KNEF + +T+GV+F +++ VD + Q+WDTAGQER+R+I +Y+R A G LL+YDVT +F NV W+ + D T I IMLVGNKADLR + + +S + A F ETSA + NV A+ + ++ Sbjct: 429 YKIVLAGDAAVGKSSFLMRLCKNEFQGNTSATLGVDFQMKTLIVDGEQTVLQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNVREWVDMVEDGTHRTIPIMLVGNKADLRDVDNAENQKCISAYLGEKLAMTYGALFCETSAKDGSNVVEAVLHLAREV 595
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: VPS21_YEAST (Vacuolar protein sorting-associated protein 21 OS=Saccharomyces cerevisiae GN=VPS21 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.179e-29 Identity = 64/154 (41.56%), Postives = 97/154 (62.99%), Query Frame = 3 Query: 261 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH---LRAVSTEDAQSFAEKENTFFMETSALESLNVEN 713 K+VL+G++ VGKS+++ RF N+F+ + TIG F T+ + +++ VK +IWDTAGQER+ ++ YYR A AL+VYDVT+ +F W+KEL + +I+I LVGNK D+ R V+ E+ + AE++ F ETSA NV + Sbjct: 9 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVND 162
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB7_ARATH (Ras-related protein Rab7 OS=Arabidopsis thaliana GN=RAB7 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.179e-29 Identity = 67/161 (41.61%), Postives = 107/161 (66.46%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSN----IVIMLVGNKADL--RHLRAVSTEDAQSF-AEKENTFFMETSALESLNVENA 716 L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ +++DD++V QIWDTAGQER++++ A+YRGA +LVYDV +FE+++ W E +L+GNK D+ + R VS + A+ + AEK N + ETSA E NV+++ Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPFILLGNKVDIDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDS 168
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB17_MOUSE (Ras-related protein Rab-17 OS=Mus musculus GN=Rab17 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.179e-29 Identity = 71/178 (39.89%), Postives = 112/178 (62.92%), Query Frame = 3 Query: 252 YLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL-RDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVVNREALEVRDD 782 Y+ K+VL+G S VGK++L R+ K +FS T+G F T+ + + +K +IWDTAGQE+Y+++ Y+RGA ALLVYD+TR +F ++WL++L ++ +V+MLVGNK DL R V+ ++ + FAE ++ FMETSA LN + +++I+ V +E L+ D Sbjct: 18 YVSKLVLLGSSSVGKTSLALRYMKQDFS-NVLPTVGCAFFTKVLDLGSSSLKLEIWDTAGQEKYQSVCHLYFRGANAALLVYDITRKDSFHKAQQWLEDLEKEFQPGEVVVMLVGNKTDLGEEREVTFQEGKEFAESKSLLFMETSA--KLNYQ------VSEIFNTVAQELLQRAGD 186
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB9B_MOUSE (Ras-related protein Rab-9B OS=Mus musculus GN=Rab9b PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.011e-29 Identity = 71/170 (41.76%), Postives = 106/170 (62.35%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD----SNIVIMLVGNKADLRHLRAVSTEDAQSFA-EKENTFFMETSALESLNVENALPEVLTQIYRV 749 L KV+L+GD GVGKS+L++R+ N+F ++ TIGVEF R + VD + V QIWDTAGQER++++ + +YRGA LL + V +FEN+ W KE + D + +++GNK D + R V+TE+AQ++ E N ++ETSA + NV A E + Q+ V Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPDHFPFVVLGNKVD-KEDRQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAFEEAVRQVLAV 175
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB7_NEUCR (Probable Ras-related protein Rab7 OS=Neurospora crassa GN=17E5.300 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.011e-29 Identity = 71/177 (40.11%), Postives = 110/177 (62.15%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERW----LKELRDHTDSNIVIMLVGNKADLRH-LRAVSTEDAQSFAE-KENTFFMETSALESLNVENALPEVLTQIYRVVNREAL 767 L KV+++GDSGVGK++L++++ +FS K+TIG +F TR + VDD+ V Q+WDTAGQER++++ A+YRGA +LVYDV +F+ ++ W L + N +++GNK D+ R +ST+ A +F + K N + ETSA E++NVE Q + V+ R AL Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPFVVLGNKIDMEESKRVISTKRAMTFCQSKGNIPYFETSAKEAINVE--------QAFEVIARNAL 176
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB41_HUMAN (Ras-related protein Rab-41 OS=Homo sapiens GN=RAB41 PE=2 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 2.011e-29 Identity = 60/176 (34.09%), Postives = 110/176 (62.50%), Query Frame = 3 Query: 261 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVVNREALEVRDDPP 788 K++ +G+ VGK++++SRF N F ++T+G++F ++++ ++D++V+ Q+WDTAGQER+ ++ +Y R + A++VYD+T +F+ ++W++ +R ++VIML+GNK DL + R V+ E + + N F+ETSA NV+ +++R V L R PP Sbjct: 33 KLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKIDLDNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVK--------KLFRRVASALLSTRTSPP 200
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB9A_CANFA (Ras-related protein Rab-9A OS=Canis familiaris GN=RAB9A PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 2.626e-29 Identity = 70/185 (37.84%), Postives = 110/185 (59.46%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD----SNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTF-FMETSALESLNVENALPEVLTQIYRVVNREALEVRDDPPTL 794 LFKV+L+GD GVGKS+L++R+ N+F + TIGVEF + + VD V QIWDTAGQER+R++ + +YRG+ LL + V +F+N+ W KE + D + +++GNK D+ R VSTE+AQ++ + + ETSA ++ NV A E + ++ +R ++ D +L Sbjct: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISE-RQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSDHLIQTDTVSL 190
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB21_RAT (Ras-related protein Rab-21 OS=Rattus norvegicus GN=Rab21 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 2.626e-29 Identity = 65/153 (42.48%), Postives = 98/153 (64.05%), Query Frame = 3 Query: 252 YLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVE 710 Y FKVVL+G+ VGK++L+ R+ +N+F+ + +T+ F T+ + + K V IWDTAGQER+ A+ YYR + GA+LVYDVT +F+ V+ W+KELR + I + +VGNK DL R VS ++A+S+AE TSA ++ +E Sbjct: 16 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIE 168 The following BLAST results are available for this feature:
BLAST of DY258624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258624 ID=DY258624; Name=DY258624; organism=Citrus clementina; type=EST; length=1280bpback to top |