DY258624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB21_MOUSE (Ras-related protein Rab-21 OS=Mus musculus GN=Rab21 PE=1 SV=4) HSP 1 Score: 130.183 bits (326), Expect = 2.626e-29 Identity = 65/153 (42.48%), Postives = 98/153 (64.05%), Query Frame = 3 Query: 252 YLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVE 710 Y FKVVL+G+ VGK++L+ R+ +N+F+ + +T+ F T+ + + K V IWDTAGQER+ A+ YYR + GA+LVYDVT +F+ V+ W+KELR + I + +VGNK DL R VS ++A+S+AE TSA ++ +E Sbjct: 16 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIE 168
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB21_BOVIN (Ras-related protein Rab-21 OS=Bos taurus GN=RAB21 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 2.626e-29 Identity = 64/153 (41.83%), Postives = 98/153 (64.05%), Query Frame = 3 Query: 252 YLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVE 710 Y FKVVL+G+ VGK++L+ R+ +N+F+ + +T+ F T+ + + K V IWDTAGQER+ A+ YYR + GA+LVYD+T +F+ V+ W+KELR + I + +VGNK DL R VS ++A+S+AE TSA ++ +E Sbjct: 15 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIE 167
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB9B_PONAB (Ras-related protein Rab-9B OS=Pongo abelii GN=RAB9B PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 3.430e-29 Identity = 69/170 (40.59%), Postives = 106/170 (62.35%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD----SNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTF-FMETSALESLNVENALPEVLTQIYRV 749 L KV+L+GD GVGKS+L++R+ N+F ++ TIGVEF R + VD + V QIWDTAGQER++++ + +YRGA LL + V +FEN+ W KE + D + +++GNK D + R V+TE+AQ++ + + ++ETSA + NV A E + Q+ V Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVD-KEDRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAV 175
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB9B_HUMAN (Ras-related protein Rab-9B OS=Homo sapiens GN=RAB9B PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 3.430e-29 Identity = 69/170 (40.59%), Postives = 106/170 (62.35%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD----SNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTF-FMETSALESLNVENALPEVLTQIYRV 749 L KV+L+GD GVGKS+L++R+ N+F ++ TIGVEF R + VD + V QIWDTAGQER++++ + +YRGA LL + V +FEN+ W KE + D + +++GNK D + R V+TE+AQ++ + + ++ETSA + NV A E + Q+ V Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVD-KEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAV 175
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB9A_HUMAN (Ras-related protein Rab-9A OS=Homo sapiens GN=RAB9A PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 3.430e-29 Identity = 70/185 (37.84%), Postives = 109/185 (58.92%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD----SNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTF-FMETSALESLNVENALPEVLTQIYRVVNREALEVRDDPPTL 794 LFKV+L+GD GVGKS+L++R+ N+F + TIGVEF + + VD V QIWDTAGQER+R++ + +YRG+ LL + V +F+N+ W KE + D + +++GNK D+ R VSTE+AQ++ + + ETSA ++ NV A E + ++ +R ++ D L Sbjct: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISE-RQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSDHLIQTDTVNL 190
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB21_HUMAN (Ras-related protein Rab-21 OS=Homo sapiens GN=RAB21 PE=1 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 3.430e-29 Identity = 64/153 (41.83%), Postives = 98/153 (64.05%), Query Frame = 3 Query: 252 YLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVE 710 Y FKVVL+G+ VGK++L+ R+ +N+F+ + +T+ F T+ + + K V IWDTAGQER+ A+ YYR + GA+LVYD+T +F+ V+ W+KELR + I + +VGNK DL R VS ++A+S+AE TSA ++ +E Sbjct: 18 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIE 170
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB21_CANFA (Ras-related protein Rab-21 OS=Canis familiaris GN=RAB21 PE=3 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 3.430e-29 Identity = 64/153 (41.83%), Postives = 98/153 (64.05%), Query Frame = 3 Query: 252 YLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVE 710 Y FKVVL+G+ VGK++L+ R+ +N+F+ + +T+ F T+ + + K V IWDTAGQER+ A+ YYR + GA+LVYD+T +F+ V+ W+KELR + I + +VGNK DL R VS ++A+S+AE TSA ++ +E Sbjct: 16 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIE 168
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: YPT52_YEAST (GTP-binding protein YPT52 OS=Saccharomyces cerevisiae GN=YPT52 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 5.851e-29 Identity = 72/199 (36.18%), Postives = 113/199 (56.78%), Query Frame = 3 Query: 258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVD--------DKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT-DSNIVIMLVGNKADL--------------------RHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVVNREAL 767 FK+VL+GDS VGKS+++ RF K+ F +STIG F ++SI + D V+K +IWDTAGQERY+++ YYR A AL+VYD+T+ + + W+ EL++ D ++VI L+GNK DL + +RA+STE+A+ +A+++ F E SA V+ ++ ++Y + E L Sbjct: 4 FKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLLGNKVDLCQETPSTETSPDSNEGGDEEQKVRAISTEEAKQYAQEQGLLFREVSAKTGEGVKEIFQDIGEKLYDLKKDEIL 202
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB12_RAT (Ras-related protein Rab-12 (Fragment) OS=Rattus norvegicus GN=Rab12 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 7.642e-29 Identity = 62/166 (37.35%), Postives = 103/166 (62.05%), Query Frame = 3 Query: 273 IGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEK-ENTFFMETSALESLNVENALPEVLTQIYRVVNREAL 767 IG GVGK++L+ RFT + F KST+GV+F +++ + K ++ QIWDTAGQER+ +ITSAYYR A G +LVYD+T+ TF+++ +W+K + + + ++L GNK D R +S + + FA++ E SA ++ NV+ +++ I + + + L Sbjct: 1 IGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLAGNKLDCETDREISRQQGEKFAQQITGMRLSEPSAKDNFNVDEIFLKLVDDILKKMPLDVL 166
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: YPTC5_CHLRE (GTP-binding protein YPTC5 OS=Chlamydomonas reinhardtii GN=YPTC5 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.303e-28 Identity = 73/182 (40.11%), Postives = 111/182 (60.99%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL----RDHTDSNIVIMLVGNKADLR--HLRAVSTEDAQSF-AEKENTFFMETSALESLNVENALPEVLTQIYRVVNREALEVRD 779 L KV+++GDSGVGK++L++++ + +F+ E K+TIG +F T+ I VDDK V QIWDTAGQER++++ SA+YRGA +LV+DV +F++++ W E N M++GNK D R VS + A+++ A K + + ETSA E +NVE A + R E L + D Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQIWDTAGQERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFIIQAGPPDPDNFPFMVLGNKIDENGGSSRQVSEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNEKEEELFMPD 189 The following BLAST results are available for this feature:
BLAST of DY258624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258624 ID=DY258624; Name=DY258624; organism=Citrus clementina; type=EST; length=1280bpback to top |