DY258624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RB40B_HUMAN (Ras-related protein Rab-40B OS=Homo sapiens GN=RAB40B PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.220e-26 Identity = 63/169 (37.28%), Postives = 98/169 (57.99%), Query Frame = 3 Query: 246 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVV 752 YD+L K +L+GDS VGK +L+ G+++ T +I +D + VK Q+WDT+GQ R+ I +Y RGA G +LVYD+ +F+ ++RW+KE+ +H + +LVGN+ L R V TE AQ++AE+ F E S L + N+ E T++ R+V Sbjct: 11 YDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHA-PGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNI----TESFTELARIV 174
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RB33A_MOUSE (Ras-related protein Rab-33A OS=Mus musculus GN=Rab33a PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.220e-26 Identity = 65/158 (41.14%), Postives = 98/158 (62.03%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYR-AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV-IMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSA---LESLNVEN 713 +FK+++IGDS VGK+ L RF F ++++TIGV+F +++ ++ + +K Q+WDTAGQER+R ++ YYR + VYDVT+ +F N++ W++E H +V +LVGNK DLR V + A FA+ N ETSA ES NVE+ Sbjct: 36 IFKIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQECNGHAVPPLVPKVLVGNKCDLREQIQVPSNLALKFADAHNMLLFETSAKDPKESQNVES 193
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RB33A_HUMAN (Ras-related protein Rab-33A OS=Homo sapiens GN=RAB33A PE=1 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 1.220e-26 Identity = 65/158 (41.14%), Postives = 98/158 (62.03%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYR-AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV-IMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSA---LESLNVEN 713 +FK+++IGDS VGK+ L RF F ++++TIGV+F +++ ++ + +K Q+WDTAGQER+R ++ YYR + VYDVT+ +F N++ W++E H +V +LVGNK DLR V + A FA+ N ETSA ES NVE+ Sbjct: 36 IFKIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQECNGHAVPPLVPKVLVGNKCDLREQIQVPSNLALKFADAHNMLLFETSAKDPKESQNVES 193
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB7_GOSHI (Ras-related protein Rab7 OS=Gossypium hirsutum GN=RAB7 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.220e-26 Identity = 64/161 (39.75%), Postives = 104/161 (64.60%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL----RDHTDSNIVIMLVGNKADL--RHLRAVSTEDAQSF-AEKENTFFMETSALESLNVENA 716 L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ ++ DD++ QIWDTAGQER++++ A+YRGA +LV+DV +F+N+ W +E N +++GNK D+ + R VS + A+++ A K N + ETSA E NV+ A Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFDDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAA 168
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB21_GEOCY (Ras-related protein Rab-21 OS=Geodia cydonium GN=RAB21 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.220e-26 Identity = 59/160 (36.88%), Postives = 94/160 (58.75%), Query Frame = 3 Query: 261 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQI 740 KVVL+G+ VGK++L+ R+++N+F+ + + T+ F + + + K ++ IWDTAGQERY A+ YYR + GA++VYD+T +F W+KEL+ + + +VGNK DL R VS +DA +AE TSA +S V ++ +I Sbjct: 18 KVVLLGEGAVGKTSLVLRYSENKFNDKHEQTLQASFVEKRLNIGGKRIQLAIWDTAGQERYHALGPIYYRDSQGAIIVYDITDEDSFHKARNWIKELKRMLGDKVTLCIVGNKIDLDRQRTVSEKDALEYAESVGAKHYYTSAKQSKGVAELFLDLAKRI 177
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RB33B_MOUSE (Ras-related protein Rab-33B OS=Mus musculus GN=Rab33b PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 3.550e-26 Identity = 62/147 (42.18%), Postives = 93/147 (63.27%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYR-AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSN-IVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSA 689 +FK+++IGDS VGK+ L RF F +++TIGV+F R++ +D + +K Q+WDTAGQER+R ++ YYR + VYD+T +F ++ W++E + H +N I +LVGNK DLR V T+ AQ FA+ + ETSA Sbjct: 33 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSA 179
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB7_MESCR (Ras-related protein Rab7A OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 3.550e-26 Identity = 64/161 (39.75%), Postives = 102/161 (63.35%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD----SNIVIMLVGNKADL--RHLRAVSTEDAQSFA-EKENTFFMETSALESLNVENA 716 L K++++GDSGVGK++L+++F +FS + K+TIG +F T+ ++ +D++ QIWDTAGQER++++ A+YRGA +L YDV +FE++ RW +E N +L+GNK D+ R VS + A+++ K N + ETSA + NVE A Sbjct: 8 LLKIIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKELQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLTYDVNVMKSFESLNRWREEFLIQASPADPDNFPFVLLGNKIDVDGGSGRVVSEKKAKAWCMSKGNIPYFETSAKDGTNVEEA 168
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB44_HUMAN (Ras-related protein Rab-44 OS=Homo sapiens GN=RAB44 PE=3 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 4.636e-26 Identity = 62/153 (40.52%), Postives = 91/153 (59.48%), Query Frame = 3 Query: 249 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNV 707 DYLF V+ +GDS VGK++ L +N F+ +T+GV+F +++ VD+K Q+WDTAGQE Y ++T R A G +L+YD+T +F +V WL L+D +VI+L+GNK D R VS E Q A++ +F E SA N+ Sbjct: 533 DYLFHVIFLGDSNVGKTSFLHLLHQNSFATGLTATVGVDFRVKTLLVDNKCFVLQLWDTAGQE-YHSMTRQLLRKADGVVLMYDITSQESFAHVRYWLDCLQDAGSDGVVILLLGNKMDCEEERQVSVEAGQQLAQELGVYFGECSAALGHNI 684
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB7L_PONAB (Ras-related protein Rab-7L1 OS=Pongo abelii GN=RAB7L1 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 6.055e-26 Identity = 67/177 (37.85%), Postives = 112/177 (63.28%), Query Frame = 3 Query: 249 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD-KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI--------MLVGNKADLRHLRAVSTEDAQSFAEKENTF--FMETSALESLNVENALPEVLTQIYR 746 D+LFKV+++GD+ VGK++L+ R++++ FS KST+GV+FA + ++ D ++V+ Q+WD AGQER+ ++T YYR A ++++DVT TF N +RW ++L DS + + +L+ NK DL AVS + F+ KEN F + ETS E+ N+ A+ ++ ++ R Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDL----DSKLTLPNGEPVPCLLLANKCDLSPW-AVSRDQIDRFS-KENGFTGWTETSVKENKNINEAMRVLIEKMMR 175
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB7L_HUMAN (Ras-related protein Rab-7L1 OS=Homo sapiens GN=RAB7L1 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 6.055e-26 Identity = 67/177 (37.85%), Postives = 112/177 (63.28%), Query Frame = 3 Query: 249 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD-KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI--------MLVGNKADLRHLRAVSTEDAQSFAEKENTF--FMETSALESLNVENALPEVLTQIYR 746 D+LFKV+++GD+ VGK++L+ R++++ FS KST+GV+FA + ++ D ++V+ Q+WD AGQER+ ++T YYR A ++++DVT TF N +RW ++L DS + + +L+ NK DL AVS + F+ KEN F + ETS E+ N+ A+ ++ ++ R Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDL----DSKLTLPNGEPVPCLLLANKCDLSPW-AVSRDQIDRFS-KENGFTGWTETSVKENKNINEAMRVLIEKMMR 175 The following BLAST results are available for this feature:
BLAST of DY258624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258624 ID=DY258624; Name=DY258624; organism=Citrus clementina; type=EST; length=1280bpback to top |