DY258624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB33_CIOIN (Putative Ras-related protein Rab-33 OS=Ciona intestinalis GN=COS41.2 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 6.055e-26 Identity = 64/196 (32.65%), Postives = 116/196 (59.18%), Query Frame = 3 Query: 255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYR-AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT--DSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVVNREALEVRDDPPTLPKGQIIILVQKIM 833 +FK+++IGDS VGK+ L RF +F ++++TIGV+F R++ +D + +K Q+WDTAGQER+R ++ YYR + YDVT+ +F+ + W++E ++ S I +LVGNK DL+ V T A FA+ + ETSA + N LT +++ +++ + ++ D P + + ++ + ++++ Sbjct: 15 VFKIIVIGDSDVGKTCLTYRFCTGKFPEKTEATIGVDFRERTLDIDGEQIKLQLWDTAGQERFRKSMVPHYYRNVHAVVFTYDVTKGRSFQGLPSWIEECERYSLNASEIPRILVGNKCDLKDQAEVDTNSATRFADANSMPLFETSAKADSEMGNIEAIFLTVAHKLKSQKPM-MKQDYPNMKRATVLSVDKEVL 209
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB23_MOUSE (Ras-related protein Rab-23 OS=Mus musculus GN=Rab23 PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 6.055e-26 Identity = 61/157 (38.85%), Postives = 94/157 (59.87%), Query Frame = 3 Query: 237 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNV 707 ++D + K+V++G+ VGKS+++ R+ K F+ + K TIGV+F R I+V+D+ V+ +WDTAGQE + AIT AYYRGA +LV+ T +FE + W +++ +I LV NK DL + E+A+ A++ F TS E LNV Sbjct: 3 EEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEV-GDIPTALVQNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNV 158
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RB40B_MOUSE (Ras-related protein Rab-40B OS=Mus musculus GN=Rab40b PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 7.908e-26 Identity = 63/169 (37.28%), Postives = 96/169 (56.80%), Query Frame = 3 Query: 246 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVV 752 YD+L K +L+GDS VGK +L+ G++ T +I +D + VK Q+WDT+GQ R+ I +Y RGA G +LVYD+ +F+ + RW+KE+ +H + +LVGN+ L R V TE AQ++AE+ F E S L + N+ E T++ R+V Sbjct: 11 YDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDHKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVVLVYDIANRWSFDGINRWIKEIDEHA-PGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNI----TESFTELARIV 174
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RYL2_YARLI (Ras-like GTP-binding protein RYL2 OS=Yarrowia lipolytica GN=RYL2 PE=3 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 1.349e-25 Identity = 63/167 (37.72%), Postives = 97/167 (58.08%), Query Frame = 3 Query: 261 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL----RHLRAVSTEDAQSFAE---KENTFFMETSALESLNVENALPEVLTQI 740 K+VL+G GVGK+ ++R+ N+F STIG F+ + + V+D V+ QIWDTAGQER+R++ YYR A +L YDVT +F+ + WL EL+ + S+I+I +VG K DL LR V E +A ++++ E SA + VE ++T++ Sbjct: 7 KIVLLGAQGVGKTCFVTRYVNNKFQAGQASTIGASFSRKRVVVNDTTVRLQIWDTAGQERFRSMAPIYYRSASCGILCYDVTSRASFDAMHLWLLELKQNLSSDIIIHIVGTKVDLVKDEPSLREVPFEQCVEYASEWLQDDSCCHEISAKDDEGVEEVFEVIITKL 173
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB7L_RAT (Ras-related protein Rab-7L1 OS=Rattus norvegicus GN=Rab7l1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.762e-25 Identity = 64/164 (39.02%), Postives = 106/164 (64.63%), Query Frame = 3 Query: 249 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIR-VDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDH----TDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTF--FMETSALESLNVENAL 719 D+LFKV+++GD+ VGK++L+ R++++ FS KST+GV+FA + ++ D ++V+ Q+WD AGQER+ ++T YYR A ++++DVT TF N +RW ++L + + +L+ NK+DL AVS + F+ KEN F + ETS E+ N+ A+ Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLLANKSDLSPW-AVSRDQIDRFS-KENGFTGWTETSVKENKNINEAM 166
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB7L_MOUSE (Ras-related protein Rab-7L1 OS=Mus musculus GN=Rab7l1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.762e-25 Identity = 64/164 (39.02%), Postives = 106/164 (64.63%), Query Frame = 3 Query: 249 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIR-VDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDH----TDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTF--FMETSALESLNVENAL 719 D+LFKV+++GD+ VGK++L+ R++++ FS KST+GV+FA + ++ D ++V+ Q+WD AGQER+ ++T YYR A ++++DVT TF N +RW ++L + + +L+ NK+DL AVS + F+ KEN F + ETS E+ N+ A+ Sbjct: 5 DHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLLANKSDLSPW-AVSRDQIDRFS-KENGFTGWTETSVKENKNINEAM 166
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB6C_HUMAN (Ras-related protein Rab-6C OS=Homo sapiens GN=RAB6C PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 2.301e-25 Identity = 54/157 (34.39%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEV 728 FK+V +G+ V K++L++RF + F ++ IG++F ++++ ++D + ++WDTAGQER R++ Y R + A++VYD+T +F+ +W+ ++R S+++I LVGN+ DL R VS E+ + A+ N F+ET A NV+ V Sbjct: 14 FKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRV 170
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB44_MOUSE (Ras-related protein Rab-44 OS=Mus musculus GN=Rab44 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.301e-25 Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 243 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNV 707 D DYL+ VV +GDS VGK++ L + F+ +T+GV+F +++ VD+K Q+WDTAGQERY ++T R A G +L+YDVT +F +V WL L+D + ++L+GNK D R V TE + A++ F E SA N+ Sbjct: 533 DPDYLYHVVFLGDSNVGKTSFLHLLHHDAFATGLTATVGVDFRVKNLLVDNKTFALQLWDTAGQERYHSLTRQLLRKAEGVVLMYDVTSQESFTHVRYWLDCLQDAGVEGVAMVLLGNKMDCEEERQVPTEAGRRLAQELGVSFGECSAALGHNI 687
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RB40L_HUMAN (Ras-related protein Rab-40A-like OS=Homo sapiens GN=RAB40AL PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 3.925e-25 Identity = 62/172 (36.05%), Postives = 97/172 (56.40%), Query Frame = 3 Query: 237 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVV 752 D YD+L K +L+GD VGKS +L G+++ T +I +D + VK ++WDT+GQ R+ I +Y RGA G +LVYD+ +FE ++RW+K++ +H + +LVGN+ L R V E AQ++AE+ F E S L + N+ E T++ R+V Sbjct: 8 DQAYDFLLKFLLVGDRDVGKSEILESLQDGTAESPYSHLGGIDYKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEHA-PGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI----IESFTELARIV 174
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RB40A_HUMAN (Ras-related protein Rab-40A OS=Homo sapiens GN=RAB40A PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 3.925e-25 Identity = 62/172 (36.05%), Postives = 97/172 (56.40%), Query Frame = 3 Query: 237 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVV 752 D YD+L K +L+GD VGKS +L G+++ T +I +D + VK ++WDT+GQ R+ I +Y RGA G +LVYD+ +FE ++RW+K++ +H + +LVGN+ L R V E AQ++AE+ F E S L + N+ E T++ R+V Sbjct: 8 DQAYDFLLKFLLVGDRDVGKSEILESLQDGAAESPYSHLGGIDYKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEHA-PGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI----IESFTELARIV 174 The following BLAST results are available for this feature:
BLAST of DY258624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258624 ID=DY258624; Name=DY258624; organism=Citrus clementina; type=EST; length=1280bpback to top |