DY258624

Overview
NameDY258624
Unique NameDY258624
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1280
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAS_EMENI (Ras-like protein OS=Emericella nidulans GN=AN0182 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 3.801e-20
Identity = 60/164 (36.59%), Postives = 92/164 (56.10%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYR 746
            +K+V++G  GVGKS L  +  ++ F  E   TI   +  + + +DD+V    + DTAGQE Y A+   Y R   G LLVY +T   +FE +  + ++ LR        I++VGNK DL   R VS ++ +S A +    F+ETSA   +NVENA  +++ +I R
Sbjct:    9 YKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCV-IDDEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYFPIIVVGNKCDLDKERVVSEQEGESLARQFGCKFIETSAKSRINVENAFYDLVREIRR 171          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB7B_HUMAN (Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7B PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.965e-20
Identity = 53/155 (34.19%), Postives = 92/155 (59.35%), Query Frame = 3
Query:  261 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDH---TDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENA 716
            K++++G  GVGK++LL ++    F  E ++T+G    ++ I + D  +K QIWDT GQER+R++ S +Y+G+ G +L +DVT   +FE ++ W  ++       + +  ++L+GNK DL   R V  E AQ +  +++  + E SA   +NV  A
Sbjct:   10 KLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPMVLLGNKIDLAD-RKVPQEVAQGWCREKDIPYFEVSAKNDINVVQA 163          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB28_HUMAN (Ras-related protein Rab-28 OS=Homo sapiens GN=RAB28 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 4.965e-20
Identity = 54/149 (36.24%), Postives = 85/149 (57.05%), Query Frame = 3
Query:  237 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKV-VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERW---LKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTF 671
            ++  D   K+V++GD   GK++L + F +  F  + K TIG++F  R I +   + V  QIWD  GQ     +   Y  GA G LLVYD+T + +FEN+E W   +K++ + +++  ++ LVGNK DL H+R +  E    F + EN F
Sbjct:    6 EESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPLVALVGNKIDLEHMRTIKPEKHLRFCQ-ENGF 153          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RRAS2_MOUSE (Ras-related protein R-Ras2 OS=Mus musculus GN=Rras2 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.484e-20
Identity = 58/169 (34.32%), Postives = 94/169 (55.62%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVVNRE 761
            +++V++G  GVGKS L  +F ++ F  +   TI   + T+   +DD+  +  I DTAGQE + A+   Y R   G LLV+ VT   +FE + ++ ++ LR        ++L+GNKADL H R V+ E+ Q  A +    +ME SA   +NV+ A  E++  I +   +E
Sbjct:   15 YRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSY-TKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVIRKFQEQE 182          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RRAS2_HUMAN (Ras-related protein R-Ras2 OS=Homo sapiens GN=RRAS2 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.484e-20
Identity = 58/169 (34.32%), Postives = 94/169 (55.62%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVVNRE 761
            +++V++G  GVGKS L  +F ++ F  +   TI   + T+   +DD+  +  I DTAGQE + A+   Y R   G LLV+ VT   +FE + ++ ++ LR        ++L+GNKADL H R V+ E+ Q  A +    +ME SA   +NV+ A  E++  I +   +E
Sbjct:   15 YRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSY-TKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVIRKFQEQE 182          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAS2_YEAST (Ras-like protein 2 OS=Saccharomyces cerevisiae GN=RAS2 PE=1 SV=4)

HSP 1 Score: 98.9821 bits (245), Expect = 6.484e-20
Identity = 57/154 (37.01%), Postives = 93/154 (60.39%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV-IMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENA 716
            +K+V++G  GVGKS L  + T++ F  E   TI   +  + + +DD+V    I DTAGQE Y A+   Y R   G LLVY +T   + + +  + +++    D++ V I++VGNK+DL + + VS +D  + A++ N  F+ETSA +++NVE A
Sbjct:   11 YKLVVVGGGGVGKSALTIQLTQSHFVDEYDPTIEDSYR-KQVVIDDEVSILDILDTAGQEEYSAMREQYMRNGEGFLLVYSITSKSSLDELMTYYQQILRVKDTDYVPIVVVGNKSDLENEKQVSYQDGLNMAKQMNAPFLETSAKQAINVEEA 163          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RALA_HUMAN (Ras-related protein Ral-A OS=Homo sapiens GN=RALA PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.484e-20
Identity = 59/163 (36.20%), Postives = 92/163 (56.44%), Query Frame = 3
Query:  255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQI 740
            L KV+++G  GVGKS L  +F  +EF +E       +   + + +D + V+  I DTAGQE Y AI   Y+R   G L V+ +T   +F     + ++ LR   D N+  +LVGNK+DL   R VS E+A++ AE+ N  ++ETSA    NV+    +++ +I
Sbjct:   14 LHKVIMVGSGGVGKSALTLQFMYDEF-VEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREI 175          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB28_BOVIN (Ras-related protein Rab-28 OS=Bos taurus GN=RAB28 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.484e-20
Identity = 55/149 (36.91%), Postives = 85/149 (57.05%), Query Frame = 3
Query:  237 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKV-VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERW---LKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTF 671
            ++  D   K+V++GD   GK++L + F +  F  + K TIG++F  R I +   + V  Q+WD  GQ     +   Y  GA G LLVYDVT + +FEN+E W   +K++ + +++  ++ LVGNK DL H+R V  E    F + EN F
Sbjct:    6 EESLDRQLKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGSLNVTLQVWDIGGQTIGGKMLDKYIYGAQGVLLVYDVTNYQSFENLEDWYSVVKKVSEESETQPLVALVGNKIDLEHMRTVKPEKHLRFCQ-ENGF 153          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAB24_DICDI (Ras-related protein Rab-24 OS=Dictyostelium discoideum GN=rab24 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.484e-20
Identity = 59/178 (33.15%), Postives = 96/178 (53.93%), Query Frame = 3
Query:  261 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL---RHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVVNREALEVRDDP 785
            KVVL+G + VGK+ +++R+T  +F  ++ +TIG  F+++ + V +  V   IWDTAG ERY+A+  +YYR A  A++ YD+T   ++E V  W +EL  + +  I I +VG K DL     ++AV  E+ +  A +      ETS+    NV      +     +  N     V  +P
Sbjct:    9 KVVLLGYASVGKTCIVTRYTSGQFG-DTHTTIGGAFSSKRVVVGETEVLLGIWDTAGTERYQAVNVSYYRRANAAIVCYDLTNRESWEKVTFWAEELTQN-EPEIEIYIVGTKLDLIQQGDIKAVPEEEVKQTARRYKAHIFETSSRTGENVSLLFQTIAEDFCKRTNNGTNPVNSNP 184          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: GSP2_YEAST (GTP-binding nuclear protein GSP2/CNR2 OS=Saccharomyces cerevisiae GN=GSP2 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.484e-20
Identity = 64/206 (31.07%), Postives = 106/206 (51.46%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVVNREALEVRDDPPTLPKGQIIILVQKIMYRL*KKLGAAPAYP 875
            FK+VL+GD G GK+  + R    EF  +  +TIGVE    S   +   +K  +WDTAGQE++  +   YY  A  A++++DVT  +T++NV  W ++L      NI I+L GNK D++  R V  +   +F  K+N  + + SA  + N E      L    ++     LE    P   P    + + +++M++  +++  A A P
Sbjct:   14 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCGNKVDVKE-RKVKAKTI-TFHRKKNLQYYDISAKSNYNFEKPF---LWLARKLAGNPQLEFVASPALAPPE--VQVDEQLMHQYQQEMDQATALP 211          
The following BLAST results are available for this feature:
BLAST of DY258624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAS_EMENI3.801e-2036.59Ras-like protein OS=Emericella nidulans GN=AN0182 ... [more]
RAB7B_HUMAN4.965e-2034.19Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7... [more]
RAB28_HUMAN4.965e-2036.24Ras-related protein Rab-28 OS=Homo sapiens GN=RAB2... [more]
RRAS2_MOUSE6.484e-2034.32Ras-related protein R-Ras2 OS=Mus musculus GN=Rras... [more]
RRAS2_HUMAN6.484e-2034.32Ras-related protein R-Ras2 OS=Homo sapiens GN=RRAS... [more]
RAS2_YEAST6.484e-2037.01Ras-like protein 2 OS=Saccharomyces cerevisiae GN=... [more]
RALA_HUMAN6.484e-2036.20Ras-related protein Ral-A OS=Homo sapiens GN=RALA ... [more]
RAB28_BOVIN6.484e-2036.91Ras-related protein Rab-28 OS=Bos taurus GN=RAB28 ... [more]
RAB24_DICDI6.484e-2033.15Ras-related protein Rab-24 OS=Dictyostelium discoi... [more]
GSP2_YEAST6.484e-2031.07GTP-binding nuclear protein GSP2/CNR2 OS=Saccharom... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CG06FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258624 ID=DY258624; Name=DY258624; organism=Citrus clementina; type=EST; length=1280bp
CCCTTCTTAATTTGCAATGTTAATAACATTACTCAAACAAGAAGAAGAAG
AATAGCGAAAGCCTTAGATTTTCTTCATCTGTTCCCATCATCAACTTCAC
CTCACCTGTCTTGCACACACACTCACACTTATCTCTCTCTCTCTATTGCG
TTAATTGCATAATACACAATTCAATAAGAGAGGAGGGGAAAAAAAAAAGA
AGAAAGAAATTGAAAAAAATGGGAGCATACAGAGCTGACGACGACTACGA
TTACTTGTTCAAGGTGGTGTTAATTGGAGATTCAGGAGTTGGGAAATCAA
ATCTGTTATCTCGATTCACCAAGAACGAATTCAGCCTCGAATCGAAATCC
ACCATCGGCGTCGAATTCGCCACTCGCAGCATTCGCGTCGACGACAAGGT
CGTCAAGGCTCAGATTTGGGACACCGCCGGCCAAGAACGATATCGTGCTA
TCACAAGTGCGTACTACCGGGGAGCTGTTGGTGCCTTGCTTGTCTATGAT
GTCACCCGACATGTTACTTTTGAGAATGTTGAGAGATGGTTGAAAGAGCT
TCGGGATCACACAGACTCAAACATTGTGATAATGCTTGTGGGTAACAAGG
CTGATTTGCGTCACTTGCGTGCTGTTTCAACTGAGGATGCTCAGTCGTTC
GCTGAGAAAGAGAACACTTTCTTCATGGAAACCTCTGCCCTAGAGTCGTT
GAATGTTGAAAATGCCCTCCCCGAAGTGCTCACTCAGATATATCGAGTTG
TTAACAGGGAGGCTCTTGAGGTAAGGGATGACCCACCCACCCTGCCCAAG
GGTCAAATTATTATATTGGTACAAAAGATAATGTATCGGCTGTGAAAAAA
ACTGGGTGCTGCTCCTGCATATCCTGCCACCTTCCAAGGAAAATCCCGGG
GGCTAAAAAAAAGTTTCCCCTCTTTTTAAAAATTTAACTTTCCCTTGGTT
TGGAAAAACTCTTGGGTTTTAACTTGGCTGCCCGGAAAAAAAAAAACATG
GGAGGTGCAGGAAAAAAATTTAAGTTTTTACATTTTTCACTCGGGACCCG
GGAAATCTCCCAAATCCTGGGTTGGAAATATAGGGTAAAAAGCCAAAAAT
CTTTTTGGGAATTGGAAAACCCTCCGGGTTTGGTGGGAAGAACCCCACAC
GGTTTTTTTTTTCTTTTTTTGGTGTATTGTCCCTCTTTTGTTTTGTCCCC
CCCCAAAAAAAAAAAATTGGTGAAAAAAAAGTTGTTTTACCCACCCCCCC
CCCCAAAAAACACCCTCCCCAAAAAGAGAA
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