DY258624

Overview
NameDY258624
Unique NameDY258624
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1280
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RBL2A_PONAB (Rab-like protein 2A OS=Pongo abelii GN=RABL2A PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.223e-18
Identity = 54/155 (34.84%), Postives = 84/155 (54.19%), Query Frame = 3
Query:  243 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNV 707
            D D   K++ +GDS VGKS L+ RF  + F  +  ST  +     +  VD K +    WDTAGQER++++ ++YY  A   ++V+DV R VT++N+  W  ELR+     I  ++V NK D        T+ + +FA+K +      SA +  NV
Sbjct:   17 DADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYKNLSAWYTELREFR-PEIPCLVVANKID---ADINVTQKSFNFAKKFSLPLYFVSAADGTNV 167          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAS1_CANAL (Ras-like protein 1 OS=Candida albicans GN=RAS1 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.223e-18
Identity = 57/154 (37.01%), Postives = 85/154 (55.19%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDS-NIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENA 716
            +K+V++G  GVGKS L  +  ++ F  E   TI   +  +   +DD+ V   + DTAGQE Y A+   Y R   G LLVY +    +F+ +  +  ++    DS N+ +++VGNK DL   R VS ED  + A   N  F+ETSA + +NVE A
Sbjct:    5 YKLVVVGGGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KQCTIDDQQVLLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSINSLNSFQELNSFYDQILRVKDSDNVPVLVVGNKCDLEMERQVSYEDGLALANSFNCPFLETSAKQRINVEEA 157          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: GSP1_ENCCU (GTP-binding nuclear protein GSP1 OS=Encephalitozoon cuniculi GN=GSP1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.223e-18
Identity = 48/150 (32.00%), Postives = 80/150 (53.33%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIG-VEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLN 704
            +K+ LIGD GVGK+  ++R     F     +T+G V      +     V+K  +WDTAGQE+   +   YY GA GA+  +DVT  +T +N+ RW+KE +    +   I++  NK D+++ + +S +      + +N  + E SA  + N
Sbjct:    8 YKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAGQEKKAVLKDVYYIGASGAIFFFDVTSRITCQNLARWVKEFQAVVGNEAPIVVCANKIDIKNRQKISKKLVMEVLKGKNYEYFEISAKTAHN 157          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAS2_RHIRA (Ras-like protein 2 OS=Rhizomucor racemosus GN=RAS2 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.597e-18
Identity = 53/164 (32.32%), Postives = 92/164 (56.10%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD-SNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYR 746
            +K+V++GD GVGKS +  +F ++ F  E   TI   +  + + +D +     I DTAGQE Y A+   + R   G +L+Y +T + TFE V++  +++    D  +  ++LVGNK DL   R V T   +  A++ N  F E SA +++ +++A   ++ +I R
Sbjct:   12 YKIVMVGDGGVGKSAMTIQFIQSTFVDEYDPTIEDSYRKQCL-IDSECAMLDILDTAGQEEYSAMRERFMRNGEGFVLIYSITSYHTFEQVQKLHEQIARVKDLEHFPMVLVGNKCDLEQDRQVPTSAGRDLAKQYNCQFFEASAKQNVRIQDAFHGLVREIRR 174          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAN_CAEEL (GTP-binding nuclear protein ran-1 OS=Caenorhabditis elegans GN=ran-1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.086e-18
Identity = 52/151 (34.44%), Postives = 83/151 (54.97%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVE 710
            FK+VL+GD G GK+  + R    EF  +  +T+GVE        +   ++  +WDTAGQE++  +   YY     A++++DVT  VT++NV  W ++L      NI I+L GNK D++  R V  +   +F  K+N  + + SA  + N E
Sbjct:   10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLA-RVCENIPIVLCGNKVDVKD-RKVKAKTI-TFHRKKNLQYYDISAKSNYNFE 157          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RALB_RAT (Ras-related protein Ral-B OS=Rattus norvegicus GN=Ralb PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.086e-18
Identity = 55/164 (33.54%), Postives = 90/164 (54.88%), Query Frame = 3
Query:  255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR--DHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQI 740
            L KV+++G  GVGKS L  +F  +EF +E       +   + + +D + V+  I DTAGQE Y AI   Y+R   G LLV+ +T H +F     + +++      +  I +++VGNK+DL   R V  E+A+  AE+    ++ETSA    NV+    +++ +I
Sbjct:   14 LHKVIMVGSGGVGKSALTLQFMYDEF-VEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEERRQVPVEEARGKAEEWGVQYVETSAKTRANVDKVFFDLMREI 176          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: GSP1_YARLI (GTP-binding nuclear protein GSP1/Ran OS=Yarrowia lipolytica GN=GSP1 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.086e-18
Identity = 63/206 (30.58%), Postives = 100/206 (48.54%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVVNREALEVRDDPPTLPKGQIIILVQKIMYRL*KKLGAAPAYP 875
            FK+VL+GD G GK+  + R    EF     +T+GVE    +   D   ++  +WDTAGQE++  +   YY      ++++DVT  +T++NV  W ++L      NI I+L GNK D++  R V  +   +F  K+N  + + SA  + N E      L    ++    +LE    P   P    I    ++M  + K L  A A P
Sbjct:    8 FKLVLVGDGGTGKTTFVKRHETGEFVNRYNATLGVEVHPLNFATDCGNIRFDVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCGNKVDVKE-RKVKAKTI-TFHRKKNLQYYDISAKSNYNFEKPF---LWLARKLAGNPSLEFVATPALRPAETAI--DPEVMQAMQKDLEEANAMP 205          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAS_LENED (Ras-like protein OS=Lentinula edodes PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.724e-18
Identity = 57/169 (33.73%), Postives = 91/169 (53.85%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVVNRE 761
            +K+V++G  GVGKS L  +F ++ F  E   TI   +  + + +DD+V    + DTAGQE Y A+   Y R   G LLVY +T   +FE +  + ++ LR        +++V NK DL + R V   + +  A      F+ETSA   +NV+ A  +++ +I R  N+E
Sbjct:   11 YKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCV-IDDEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISTFHQQILRVKDQDTFPVVVVANKCDLEYERQVGMNEGRDLARHFGCKFVETSAKVRINVDQAFQDLVREI-RKYNKE 177          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RASL_COLTR (Ras-like protein OS=Colletotrichum trifolii GN=RAS PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.724e-18
Identity = 57/169 (33.73%), Postives = 94/169 (55.62%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVVNRE 761
            +K+V++G  GVGKS L  +  ++ F  E   TI   +  + + +D++V    + DTAGQE Y A+   Y R   G LLVY +T   +FE +  + ++ LR        +++VGNK DL   R V+ ++ ++ A+     F+ETSA   +NV+ A  +++ +I R  NRE
Sbjct:    9 YKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCV-IDEEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEITTFQQQILRVKDKDYFPMVVVGNKCDLEGEREVTRQEGEALAKSFGCKFIETSAKSRINVDKAFYDIVREIRR-YNRE 175          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAS2_DROME (Ras-like protein 2 OS=Drosophila melanogaster GN=Ras64B PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 2.724e-18
Identity = 55/174 (31.61%), Postives = 97/174 (55.75%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEV--LTQIYRVVNREALE 770
            +K+V++G  GVGKS +  +F ++ F  +   TI   + T+   +DD   K  I DTAGQE + A+   Y R   G LLV+ +  H +F+ + ++ ++ LR        +++VGNK DL+H + VS E+AQ+ +      ++E SA   +NV+ A  E+  + + +++  R  +E
Sbjct:    6 YKLVVVGGGGVGKSAITIQFIQSYFVTDYDPTIEDSY-TKQCNIDDVPAKLDILDTAGQEEFSAMREQYMRSGEGFLLVFALNDHSSFDEIPKFQRQILRVKDRDEFPMLMVGNKCDLKHQQQVSLEEAQNTSRNLMIPYIECSAKLRVNVDQAFHELVRIVRKFQIAERPFIE 178          
The following BLAST results are available for this feature:
BLAST of DY258624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RBL2A_PONAB1.223e-1834.84Rab-like protein 2A OS=Pongo abelii GN=RABL2A PE=2... [more]
RAS1_CANAL1.223e-1837.01Ras-like protein 1 OS=Candida albicans GN=RAS1 PE=... [more]
GSP1_ENCCU1.223e-1832.00GTP-binding nuclear protein GSP1 OS=Encephalitozoo... [more]
RAS2_RHIRA1.597e-1832.32Ras-like protein 2 OS=Rhizomucor racemosus GN=RAS2... [more]
RAN_CAEEL2.086e-1834.44GTP-binding nuclear protein ran-1 OS=Caenorhabditi... [more]
RALB_RAT2.086e-1833.54Ras-related protein Ral-B OS=Rattus norvegicus GN=... [more]
GSP1_YARLI2.086e-1830.58GTP-binding nuclear protein GSP1/Ran OS=Yarrowia l... [more]
RAS_LENED2.724e-1833.73Ras-like protein OS=Lentinula edodes PE=3 SV=1[more]
RASL_COLTR2.724e-1833.73Ras-like protein OS=Colletotrichum trifolii GN=RAS... [more]
RAS2_DROME2.724e-1831.61Ras-like protein 2 OS=Drosophila melanogaster GN=R... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CG06FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258624 ID=DY258624; Name=DY258624; organism=Citrus clementina; type=EST; length=1280bp
CCCTTCTTAATTTGCAATGTTAATAACATTACTCAAACAAGAAGAAGAAG
AATAGCGAAAGCCTTAGATTTTCTTCATCTGTTCCCATCATCAACTTCAC
CTCACCTGTCTTGCACACACACTCACACTTATCTCTCTCTCTCTATTGCG
TTAATTGCATAATACACAATTCAATAAGAGAGGAGGGGAAAAAAAAAAGA
AGAAAGAAATTGAAAAAAATGGGAGCATACAGAGCTGACGACGACTACGA
TTACTTGTTCAAGGTGGTGTTAATTGGAGATTCAGGAGTTGGGAAATCAA
ATCTGTTATCTCGATTCACCAAGAACGAATTCAGCCTCGAATCGAAATCC
ACCATCGGCGTCGAATTCGCCACTCGCAGCATTCGCGTCGACGACAAGGT
CGTCAAGGCTCAGATTTGGGACACCGCCGGCCAAGAACGATATCGTGCTA
TCACAAGTGCGTACTACCGGGGAGCTGTTGGTGCCTTGCTTGTCTATGAT
GTCACCCGACATGTTACTTTTGAGAATGTTGAGAGATGGTTGAAAGAGCT
TCGGGATCACACAGACTCAAACATTGTGATAATGCTTGTGGGTAACAAGG
CTGATTTGCGTCACTTGCGTGCTGTTTCAACTGAGGATGCTCAGTCGTTC
GCTGAGAAAGAGAACACTTTCTTCATGGAAACCTCTGCCCTAGAGTCGTT
GAATGTTGAAAATGCCCTCCCCGAAGTGCTCACTCAGATATATCGAGTTG
TTAACAGGGAGGCTCTTGAGGTAAGGGATGACCCACCCACCCTGCCCAAG
GGTCAAATTATTATATTGGTACAAAAGATAATGTATCGGCTGTGAAAAAA
ACTGGGTGCTGCTCCTGCATATCCTGCCACCTTCCAAGGAAAATCCCGGG
GGCTAAAAAAAAGTTTCCCCTCTTTTTAAAAATTTAACTTTCCCTTGGTT
TGGAAAAACTCTTGGGTTTTAACTTGGCTGCCCGGAAAAAAAAAAACATG
GGAGGTGCAGGAAAAAAATTTAAGTTTTTACATTTTTCACTCGGGACCCG
GGAAATCTCCCAAATCCTGGGTTGGAAATATAGGGTAAAAAGCCAAAAAT
CTTTTTGGGAATTGGAAAACCCTCCGGGTTTGGTGGGAAGAACCCCACAC
GGTTTTTTTTTTCTTTTTTTGGTGTATTGTCCCTCTTTTGTTTTGTCCCC
CCCCAAAAAAAAAAAATTGGTGAAAAAAAAGTTGTTTTACCCACCCCCCC
CCCCAAAAAACACCCTCCCCAAAAAGAGAA
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