DY258624

Overview
NameDY258624
Unique NameDY258624
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1280
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAL_DISOM (Ras-related protein O-RAL OS=Discopyge ommata PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 7.926e-18
Identity = 55/164 (33.54%), Postives = 90/164 (54.88%), Query Frame = 3
Query:  255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR--DHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQI 740
            L KV+++G  GVGKS L  +F  +EF +E       +   + + +D + V+  I DTAGQE Y AI   Y+R   G L V+ +T   +F     + +++      +  I ++LVGNK+DL   R VS E+A+S AE+    ++ETSA    NV+    +++ ++
Sbjct:   14 LHKVIMVGSGGVGKSALTLQFMYDEF-VEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEQESFTATVEFREQILRVKAEEDKIPLLLVGNKSDLEDRRQVSIEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREV 176          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RALBB_XENLA (Ras-related protein ralB-B OS=Xenopus laevis GN=ralb-B PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.035e-17
Identity = 53/164 (32.32%), Postives = 90/164 (54.88%), Query Frame = 3
Query:  255 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR--DHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQI 740
            L KV+++G  GVGKS L  +F  +EF +E       +   + + +D + V+  I DTAGQE Y AI   Y+R   G LLV+ +T H +F     + +++      +  I +++VGNK+DL   R V  ++A+  AE+    ++ETSA    NV+    +++ ++
Sbjct:   14 LHKVIMVGSGGVGKSALTLQFMYDEF-VEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEDRRQVPMDEARGKAEEWGVQYVETSAKTRANVDKVFFDLMREV 176          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: DJ27A_XENLA (DnaJ homolog subfamily C member 27-A OS=Xenopus laevis GN=dnajc27-A PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.035e-17
Identity = 46/158 (29.11%), Postives = 84/158 (53.16%), Query Frame = 3
Query:  231 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD-----SNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSA 689
            R D       KV+ +G++ VGKS ++ R+ +  F  + ++TIG+++    + + D+ +K  I+D AG   +  + + +Y+   G +LVYDV    TFE+++ WL E++          NIV  +  NK D    R+V   + + ++E +   + ETSA
Sbjct:    8 RKDSRKALRIKVISMGNAEVGKSCIIKRYCEKRFVPKYQATIGIDYGVTKVHIKDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGHKETFESLDGWLAEMKQELGPQGNIDNIVFAVCANKIDSTKHRSVDESEGRLWSESKGFLYFETSA 165          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RIT2_HUMAN (GTP-binding protein Rit2 OS=Homo sapiens GN=RIT2 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.352e-17
Identity = 59/164 (35.98%), Postives = 91/164 (55.49%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR---DHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQI 740
            +KVV++G  GVGKS +  +F  ++F      TI   + T+ +R+D++     I DTAGQ  + A+   Y RG  G ++ Y VT   +F+   ++ KEL     HT   I ++LVGNK DL   R VSTE+  S A++ N  F ETSA     +++A   ++ +I
Sbjct:   21 YKVVMLGAGGVGKSAMTMQFISHQFPDYHDPTIEDAYKTQ-VRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKF-KELIFQVRHT-YEIPLVLVGNKIDLEQFRQVSTEEGLSLAQEYNCGFFETSAALRFCIDDAFHGLVREI 181          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAN_PLAFA (GTP-binding nuclear protein Ran OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.352e-17
Identity = 50/159 (31.45%), Postives = 87/159 (54.72%), Query Frame = 3
Query:  240 DDYDYL--FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVE 710
            D  +Y+  +K++L+GD GVGK+  + R    EF  +   T+GVE      + +    +  +WDTAGQE++  +   YY  +  A++++DV+  +T++NV  W +++       I ++LVGNK D++  R V +   Q F  K N  + + SA  + N E
Sbjct:    2 DSQEYIPQYKLILVGDGGVGKTTFVKRHLTGEFEKKYIPTLGVEVHPLKFQTNFGKTQFNVWDTAGQEKFGGLRDGYYIKSDCAIIMFDVSSRITYKNVPNWYRDI-TRVCETIPMVLVGNKVDVKD-RQVKSRQIQ-FHRKRNLQYYDLSARSNYNFE 157          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: YPT10_YEAST (GTP-binding protein YPT10 OS=Saccharomyces cerevisiae GN=YPT10 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.766e-17
Identity = 48/122 (39.34%), Postives = 76/122 (62.30%), Query Frame = 3
Query:  261 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVD------DKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 608
            KVVL+GDS VGK+++++R    +F  +  +TIG  F T++I V       +K +  +IWDTAGQERY+++   YYR A  AL+V+++    + +  + W ++L+D      VI +VGNK DL
Sbjct:    6 KVVLLGDSSVGKTSIVTRLKSGKFLAKHAATIGAAFITKTIEVPSNDSSTEKRIHMEIWDTAGQERYKSLVPMYYRDANIALIVFELGDVSSLQCAKTWFQDLQDRAQGTQVI-IVGNKYDL 126          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAS_SCHPO (Ras-like protein 1 OS=Schizosaccharomyces pombe GN=ras1 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.766e-17
Identity = 59/190 (31.05%), Postives = 95/190 (50.00%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYR--------VVNREALEVRDDPPTLPK 800
            +K+V++GD GVGKS L  +  ++ F  E   TI   +  +   +D +     + DTAGQE Y A+   Y R   G LLVY++T   +F+ +  + ++ LR        ++LV NK DL   R VS  + +  A+  +  ++ETSA   LNVE A   ++  I R          N++A++    P +  K
Sbjct:    9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRRYNKSEEKGFQNKQAVQTAQVPASTAK 197          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAS2_PHYPO (Ras-like protein 2 OS=Physarum polycephalum GN=RAS-2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.766e-17
Identity = 55/166 (33.13%), Postives = 87/166 (52.41%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVV 752
            +K+V++G  GVGKS L  +  +N F  E   TI   +  + + +D++     I DTAGQE Y A+   Y R   G ++VY +T   +F+ +  + ++ LR      + ++L GNK DL   R V+T + Q  A      F+ETSA   LNVE     ++ +I + V
Sbjct:    6 YKLVIVGGGGVGKSALTIQLIQNHFIDEYDPTIEDSYR-KQVVIDEETCLLDILDTAGQEEYSAMRDQYMRTGQGFVMVYSITSRSSFDEINAFREQILRVKDKDTVPMVLAGNKCDLASERQVTTNEGQELARAFGCPFVETSAKARLNVEECFYGLVREIRKEV 170          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAP2A_PONAB (Ras-related protein Rap-2a OS=Pongo abelii GN=RAP2A PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.306e-17
Identity = 58/177 (32.77%), Postives = 93/177 (52.54%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL-RDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVVNREALEVRDDP 785
            +KVV++G  GVGKS L  +F    F  +   TI  +F  + I VD      +I DTAG E++ ++   Y +   G +LVY +    +F++++    ++ R      + ++LVGNK DL   R VS+ + ++ AE+    FMETSA     V+    E+  +I R +N  A   +DDP
Sbjct:    4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSNEGRALAEEWGCPFMETSAKSKTMVD----ELFAEIVRQMNYAAQPDKDDP 175          
BLAST of DY258624 vs. ExPASy Swiss-Prot
Match: RAP2A_MOUSE (Ras-related protein Rap-2a OS=Mus musculus GN=Rap2a PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.306e-17
Identity = 58/177 (32.77%), Postives = 93/177 (52.54%), Query Frame = 3
Query:  258 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL-RDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENALPEVLTQIYRVVNREALEVRDDP 785
            +KVV++G  GVGKS L  +F    F  +   TI  +F  + I VD      +I DTAG E++ ++   Y +   G +LVY +    +F++++    ++ R      + ++LVGNK DL   R VS+ + ++ AE+    FMETSA     V+    E+  +I R +N  A   +DDP
Sbjct:    4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSNEGRALAEEWGCPFMETSAKSKTMVD----ELFAEIVRQMNYAAQPDKDDP 175          
The following BLAST results are available for this feature:
BLAST of DY258624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAL_DISOM7.926e-1833.54Ras-related protein O-RAL OS=Discopyge ommata PE=2... [more]
RALBB_XENLA1.035e-1732.32Ras-related protein ralB-B OS=Xenopus laevis GN=ra... [more]
DJ27A_XENLA1.035e-1729.11DnaJ homolog subfamily C member 27-A OS=Xenopus la... [more]
RIT2_HUMAN1.352e-1735.98GTP-binding protein Rit2 OS=Homo sapiens GN=RIT2 P... [more]
RAN_PLAFA1.352e-1731.45GTP-binding nuclear protein Ran OS=Plasmodium falc... [more]
YPT10_YEAST1.766e-1739.34GTP-binding protein YPT10 OS=Saccharomyces cerevis... [more]
RAS_SCHPO1.766e-1731.05Ras-like protein 1 OS=Schizosaccharomyces pombe GN... [more]
RAS2_PHYPO1.766e-1733.13Ras-like protein 2 OS=Physarum polycephalum GN=RAS... [more]
RAP2A_PONAB2.306e-1732.77Ras-related protein Rap-2a OS=Pongo abelii GN=RAP2... [more]
RAP2A_MOUSE2.306e-1732.77Ras-related protein Rap-2a OS=Mus musculus GN=Rap2... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CG06FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258624 ID=DY258624; Name=DY258624; organism=Citrus clementina; type=EST; length=1280bp
CCCTTCTTAATTTGCAATGTTAATAACATTACTCAAACAAGAAGAAGAAG
AATAGCGAAAGCCTTAGATTTTCTTCATCTGTTCCCATCATCAACTTCAC
CTCACCTGTCTTGCACACACACTCACACTTATCTCTCTCTCTCTATTGCG
TTAATTGCATAATACACAATTCAATAAGAGAGGAGGGGAAAAAAAAAAGA
AGAAAGAAATTGAAAAAAATGGGAGCATACAGAGCTGACGACGACTACGA
TTACTTGTTCAAGGTGGTGTTAATTGGAGATTCAGGAGTTGGGAAATCAA
ATCTGTTATCTCGATTCACCAAGAACGAATTCAGCCTCGAATCGAAATCC
ACCATCGGCGTCGAATTCGCCACTCGCAGCATTCGCGTCGACGACAAGGT
CGTCAAGGCTCAGATTTGGGACACCGCCGGCCAAGAACGATATCGTGCTA
TCACAAGTGCGTACTACCGGGGAGCTGTTGGTGCCTTGCTTGTCTATGAT
GTCACCCGACATGTTACTTTTGAGAATGTTGAGAGATGGTTGAAAGAGCT
TCGGGATCACACAGACTCAAACATTGTGATAATGCTTGTGGGTAACAAGG
CTGATTTGCGTCACTTGCGTGCTGTTTCAACTGAGGATGCTCAGTCGTTC
GCTGAGAAAGAGAACACTTTCTTCATGGAAACCTCTGCCCTAGAGTCGTT
GAATGTTGAAAATGCCCTCCCCGAAGTGCTCACTCAGATATATCGAGTTG
TTAACAGGGAGGCTCTTGAGGTAAGGGATGACCCACCCACCCTGCCCAAG
GGTCAAATTATTATATTGGTACAAAAGATAATGTATCGGCTGTGAAAAAA
ACTGGGTGCTGCTCCTGCATATCCTGCCACCTTCCAAGGAAAATCCCGGG
GGCTAAAAAAAAGTTTCCCCTCTTTTTAAAAATTTAACTTTCCCTTGGTT
TGGAAAAACTCTTGGGTTTTAACTTGGCTGCCCGGAAAAAAAAAAACATG
GGAGGTGCAGGAAAAAAATTTAAGTTTTTACATTTTTCACTCGGGACCCG
GGAAATCTCCCAAATCCTGGGTTGGAAATATAGGGTAAAAAGCCAAAAAT
CTTTTTGGGAATTGGAAAACCCTCCGGGTTTGGTGGGAAGAACCCCACAC
GGTTTTTTTTTTCTTTTTTTGGTGTATTGTCCCTCTTTTGTTTTGTCCCC
CCCCAAAAAAAAAAAATTGGTGAAAAAAAAGTTGTTTTACCCACCCCCCC
CCCCAAAAAACACCCTCCCCAAAAAGAGAA
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