DY258666

Overview
NameDY258666
Unique NameDY258666
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length916
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_CHLL2 (Anthranilate phosphoribosyltransferase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.758e-23
Identity = 62/164 (37.80%), Postives = 94/164 (57.32%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS---EG--LDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG 521
            DVLE LG  IDL  E         G  F+ +  +HP+MK V  +RK+L ++T+FN+LGP++NPA     +VGVY+  L+      L + G + A++VH+   EG  LDE S  GP  I+++    + R +  P D+G+ R  L ++QGG    NA ++R +L G
Sbjct:  122 DVLEELGFRIDLPVEATVELYARTGFSFLFAPLFHPSMKRVAHIRKELGIRTIFNMLGPLINPARSKRQLVGVYSSELMELYTEVLLQTGTRHAMIVHAMTEEGVSLDEPSLNGPTYIVEIQNGYVCRHTVYPEDFGLDRHPLSAIQGGERKQNAAIIRSILDG 285          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_BORPE (Anthranilate phosphoribosyltransferase OS=Bordetella pertussis GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.758e-23
Identity = 68/207 (32.85%), Postives = 103/207 (49.76%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 662
            DVLEALG  + L PE V  CV   GIGFM +  +H AMK V  VRK+L V+T+FNILGP+ NPA     ++GV++ +LV      L+R G +  LVVH  +G+DE S     ++ ++    +  +   P DYG+   +   ++      +  ++   L    G                  K +++ E +ALA E   +G A   L+
Sbjct:  126 DVLEALGANLQLTPEEVAECVAATGIGFMFAPAHHGAMKNVAAVRKELGVRTIFNILGPLTNPAGAANQLMGVFHPDLVGIQVRVLERLGSRHVLVVHGKDGMDEASLGAATMVGELKDGVVREYEIHPEDYGLSMMSNRGIKVSNREESRALVIEALDNVDGVARDIVALNAGLAIYAGNKADSIPEALALAFETISNGSARAKLE 332          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_BORPA (Anthranilate phosphoribosyltransferase OS=Bordetella parapertussis GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.758e-23
Identity = 68/207 (32.85%), Postives = 103/207 (49.76%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 662
            DVLEALG  + L PE V  CV   GIGFM +  +H AMK V  VRK+L V+T+FNILGP+ NPA     ++GV++ +LV      L+R G +  LVVH  +G+DE S     ++ ++    +  +   P DYG+   +   ++      +  ++   L    G                  K +++ E +ALA E   +G A   L+
Sbjct:  126 DVLEALGANLQLTPEEVAECVAATGIGFMFAPAHHGAMKNVAAVRKELGVRTIFNILGPLTNPAGAANQLMGVFHPDLVGIQVRVLERLGSRHVLVVHGKDGMDEASLGAATMVGELKDGVVREYEIHPEDYGLSMMSNRGIKVSNREESRALVIEALDNVDGVARDIVALNAGLAIYAGNKADSIPEALALAFETISNGSARAKLE 332          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_BORBR (Anthranilate phosphoribosyltransferase OS=Bordetella bronchiseptica GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.758e-23
Identity = 68/207 (32.85%), Postives = 103/207 (49.76%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 662
            DVLEALG  + L PE V  CV   GIGFM +  +H AMK V  VRK+L V+T+FNILGP+ NPA     ++GV++ +LV      L+R G +  LVVH  +G+DE S     ++ ++    +  +   P DYG+   +   ++      +  ++   L    G                  K +++ E +ALA E   +G A   L+
Sbjct:  126 DVLEALGANLQLTPEEVAECVAATGIGFMFAPAHHGAMKNVAAVRKELGVRTIFNILGPLTNPAGAANQLMGVFHPDLVGIQVRVLERLGSRHVLVVHGKDGMDEASLGAATMVGELKDGVVREYEIHPEDYGLSMMSNRGIKVSNREESRALVIEALDNVDGVARDIVALNAGLAIYAGNKADSIPEALALAFETISNGSARAKLE 332          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_RHOBA (Anthranilate phosphoribosyltransferase OS=Rhodopirellula baltica GN=trpD PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.296e-23
Identity = 65/195 (33.33%), Postives = 103/195 (52.82%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALARE 626
            DVLE LGV I+ +P+ V R +++ GI F  + K HPAM+ V  VR+KL V T+FN+LGP+ NPA     ++G        K+A AL     +R+ V+H+ +G DE+S  G    ++V     +  ++ P D+G+      +L    P  +AE++R +  G  G               +  +V++L EGV +A E
Sbjct:  132 DVLECLGVKIESEPDQVSRRLNDIGICFCFAAKLHPAMRHVVSVRRKLAVPTLFNLLGPLCNPAGATHQLLGTAAPETQQKIAAALAELDTQRSYVLHAQDGQDEVSLDGETSCIEVASGTQQNHTWTPADFGLTPVHQNALAAADPPESAEIIRNLFGGSPGSHRDTVLAGCAAALRLVGRVSSLTEGVEIAAE 326          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_ANAVT (Anthranilate phosphoribosyltransferase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.296e-23
Identity = 71/219 (32.42%), Postives = 119/219 (54.34%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILD---VTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE-RGXXXXXXXXXXXXXXXVSCKVNTL--AEGVALAREIQLSGKALNTLDLWIEVSK 683
            DVLEALGV +    E V+  + E GI F+ +  +HPA+K V  +R+ L+++TVFN+LGP++NP      VVG++   L+  +A AL   G ++A+V+H  G + +   G G + D   ++  K++  + +P + G+    + +L+GG    NAE+L+ VL G+                  V+  V  L  A+GV++A+EI  +G A   L+  +   K
Sbjct:  145 DVLEALGVNLGASSEKVQAALQEVGITFLFAPGWHPALKAVATLRRTLRIRTVFNLLGPLVNPLRPTGQVVGLFTPKLLTTVAQALDNLGKQKAIVLH--GRERLDEAGLGDLTDLAVLSDGKLQLTTINPQEVGVTPAPIGALRGGDVQENAEILKAVLQGQGTQAQQDAVALNAALALQVAGAVPLLDHAKGVSVAKEILQTGTAWAKLEQLVHFLK 361          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_PSYWF (Anthranilate phosphoribosyltransferase OS=Psychrobacter sp. (strain PRwf-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.998e-23
Identity = 58/161 (36.02%), Postives = 93/161 (57.76%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            D+LE  G+ +++ PE  R C++  GIGF+ +  +H AMK   PVR+ LKV+T+FNILGP+ NPA V   VVGV+ +N+   +A+  +  G K  +VV S + LDE+S      + ++   ++  +   P D GI   TL  L       + ++++  LSG+
Sbjct:  141 DLLEQAGLNLNITPEQTRECIETQGIGFLFAPNHHTAMKHAIPVRRALKVRTIFNILGPLTNPAGVKNLVVGVFTDNMCEPLAHVFKNLGAKHVMVVGSKDRLDEISLATSTKVAELKDGEVTVYDIFPEDAGIDSQTLVGLDVNSSEQSLQLIQAALSGK 301          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_CORA7 (Anthranilate phosphoribosyltransferase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.998e-23
Identity = 58/159 (36.48%), Postives = 88/159 (55.35%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG 521
            DVLEALG+ ++LDP+   R ++ +   F+ +  Y+PA+  V+PVRK L + T+FN +GP+L+P    F ++G+ N      +A   +  G  RALVVH  G DE++  G   + ++    I  +   P D GI    L  L GG    NA+ LR V +G
Sbjct:  126 DVLEALGIPLNLDPDRAVRQLEASNFTFLFAPAYNPAVAHVQPVRKGLGISTLFNTMGPLLSPGRPEFQIMGIANPEQGQLIAEVFKDLGRTRALVVHGAGTDEIAVHGTTQVWELRDGTISHYELTPEDLGISHHELADLAGGNGEENAKALRAVFAG 284          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_CLAMS (Anthranilate phosphoribosyltransferase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.998e-23
Identity = 58/162 (35.80%), Postives = 91/162 (56.17%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG 530
            DVL ALG+ + + PE V   + E GI +  +  +HP  +     R++L + T+FN+LGP+ NPA    + VGV + + V  M    +  G    +    +G+D+++  G   I +V++  +     DPL+ GIPR  +E+L G G   NAEV+RRVL+GE G
Sbjct:  127 DVLTALGIDLTIAPERVAAVLRETGITYAHAALFHPGFRHAAATRRELGISTLFNVLGPLCNPARPEASAVGVADLSRVPLMVGVFRTRGATALVYRGDDGIDKLTTTGHSHIWEVSRGAVTEHDLDPLELGIPRAPIEALLGEGVEENAEVIRRVLAGEPG 288          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_METTH (Anthranilate phosphoribosyltransferase OS=Methanobacterium thermoautotrophicum GN=trpD PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.916e-23
Identity = 74/225 (32.89%), Postives = 112/225 (49.78%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH------SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGG-PAYNAEVLRRVLSG-----ERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 683
            D+LEA GV I+LD     R + + GI FM +  +H A   V  VR+ L  KTVFNILGP+ +PA     ++GV++  LV  +A  L+  G + A+VVH      +  LDE+S +GP L+  +  ++I      P D+G+    LE L+ G   A N E+   VL G     E+                ++   +TL EG   A+    SG AL  L+ ++  ++
Sbjct:  124 DILEAAGVNIELDAAAAARSLSDVGISFMFAPLFHRATARVAAVRRSLGFKTVFNILGPLTSPAAAGIQLLGVFDPQLVGPVAEVLRNLGTRCAMVVHGFDANLNPALDEISTVGPTLVAFLEDDEIRIDRLMPPDFGVEVGELEHLRAGSTTAENLELFMDVLRGREDTPEQKSRLDIALANAGALIYLAGLADTLPEGTETAKRTVKSGAALELLEEFVSYTR 348          
The following BLAST results are available for this feature:
BLAST of DY258666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_CHLL21.758e-2337.80Anthranilate phosphoribosyltransferase OS=Chlorobi... [more]
TRPD_BORPE1.758e-2332.85Anthranilate phosphoribosyltransferase OS=Bordetel... [more]
TRPD_BORPA1.758e-2332.85Anthranilate phosphoribosyltransferase OS=Bordetel... [more]
TRPD_BORBR1.758e-2332.85Anthranilate phosphoribosyltransferase OS=Bordetel... [more]
TRPD_RHOBA2.296e-2333.33Anthranilate phosphoribosyltransferase OS=Rhodopir... [more]
TRPD_ANAVT2.296e-2332.42Anthranilate phosphoribosyltransferase OS=Anabaena... [more]
TRPD_PSYWF2.998e-2336.02Anthranilate phosphoribosyltransferase OS=Psychrob... [more]
TRPD_CORA72.998e-2336.48Anthranilate phosphoribosyltransferase OS=Coryneba... [more]
TRPD_CLAMS2.998e-2335.80Anthranilate phosphoribosyltransferase OS=Clavibac... [more]
TRPD_METTH3.916e-2332.89Anthranilate phosphoribosyltransferase OS=Methanob... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI2DG06FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258666 ID=DY258666; Name=DY258666; organism=Citrus clementina; type=EST; length=916bp
CTCAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTG
TTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAG
GTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACAAAGTATCACC
CTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACT
GTATTCAATATATTGGGTCCTATGTTGAATCCTGCATGTGTGCCATTCGC
TGTGGTTGGTGTTTACAATGAAAACTTGGTACTCAAAATGGCCAATGCAC
TGCAACGATTTGGCCTGAAAAGAGCATTGGTTGTTCACTCAGAGGGTTTG
GATGAGATGAGTCCCCTTGGACCTGGTCTGATCCTTGATGTCACCCAAGA
AAAAATTGAGAGATTCTCATTTGATCCATTGGACTACGGCATTCCTCGCT
GCACTTTAGAAAGCTTGCAAGGTGGAGGCCCAGCATATAATGCAGAGGTC
TTAAGGCGTGTACTGTCTGGAGAAAGAGGGGCAATAGCTGATGCATTAAT
CCTAAATGCTGCAGCAGCACTCTTGGTCAGTTGCAAAGTGAACACCTTGG
CTGAGGGTGTAGCCCTGGCGCGTGAAATTCAATTATCAGGGAAAGCTCTT
AATACGCTGGATTTATGGATAGAAGTCTCAAAGGGGGCGCCAGCATTTGC
TTGTGCATGAGTAATGGAGTTTTGAAGACTAAGAAAGACTTCATTGCAGT
ACCATGAATAACAGGTAGGTCAAAAGTTGGCTTGCTTATGCACGTCTCGT
CGATCAACTATTAGAAAGAAATTAAAAGTCCCTAAATTAATATTGTTTAT
TGTAATGTATCAAAAGTATTGGCTTATGGAATGTATTATGGTAATGTTGA
ATACTTTTTTTGGGCA
back to top