DY258666

Overview
NameDY258666
Unique NameDY258666
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length916
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPCD_ARCFU (Tryptophan biosynthesis protein trpCD OS=Archaeoglobus fulgidus GN=trpCD PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.916e-23
Identity = 60/160 (37.50%), Postives = 94/160 (58.75%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            DVLEALGV I++D E  R+ + E    F+ +  YH +   V  VR+ L ++T+FN+ GP+ NPA     +VGV +E L++++A A+   G +RA+VV+  G+DE++P      + V    +ER   +P D+GI RC +      G   +AE +R V SG+
Sbjct:  336 DVLEALGVRIEMDEERARKMIAETNFAFLFAPLYHKSFARVAAVRRNLGIRTIFNVTGPLTNPARPEVQIVGVASEILLVEVAKAMSLLG-RRAVVVYGSGMDEVNP-NSSTDIAVVNGGVERLKLEPEDFGIERCRVLPCSSSGE--SAERIRAVFSGK 491          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_PYRAR (Anthranilate phosphoribosyltransferase OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.114e-23
Identity = 56/162 (34.57%), Postives = 88/162 (54.32%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG 530
            D +EA+G  +++ PE     V++ G  F+ + +YHPA   V PVR+ L  +T+FNI+GP+ NP  V   ++GV  E L+  +A A    G + A+VVH  G+DE+S  G   + +V +  +ER+   P D G PR  +            E + + L+G RG
Sbjct:  122 DFMEAVGYNLEVGPEKAAELVEKVGFAFVFAPRYHPAFAKVAPVRRALPFRTIFNIVGPLANPGLVKRQLIGVAEERLLEVVAAAAAELGFEHAVVVHGSGVDEVSSEGATTVYEVKRGSLERYQIAPEDLGAPRVPIPRASD-----KEEAVAKALAGLRG 278          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_DICT6 (Anthranilate phosphoribosyltransferase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.114e-23
Identity = 70/220 (31.82%), Postives = 108/220 (49.09%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH--SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG-ERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKGAPA 695
            DV+EALG     +PE + R +DE GIG + +  +HP +     VR++L + T+FN+ GPMLNPA +   ++GVY+E ++  MA A         L  H   +G+DE+S  G  +   +   KI+ F F P D GI R   E  +GG    NA++L  +  G  +                V  KV ++ EG  + +E  + GK       ++E  +G  A
Sbjct:  121 DVIEALGFKCSDNPEEIARDIDEKGIGIIFAPYFHPVVGKAVKVRRELGIGTIFNMAGPMLNPANLSGQILGVYSEKVMRNMAEASLILKKDNILFYHGKDDGIDEISLSGKTIFAYLKNGKIDYFDFSPEDIGIKRYQKEEFKGGDAQENAKILEDIFKGVAKESHIDIVAVNSAFALWVLGKVKSVKEGFDMVKEHIMKGKVYE----FVETLRGRTA 336          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_STAS1 (Anthranilate phosphoribosyltransferase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.724e-23
Identity = 63/205 (30.73%), Postives = 116/205 (56.59%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQ-EKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG-ERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKAL 650
            D+LEA+G+      E     +++ G+ F+ +T  +P MK ++P+RK +   T+FNI GP++NP  + + V+GVY  + + K+A  L+  G K+A+VV+ + G+DE +  G  +I +V + E  + ++ +P D G+     E+L GG P  N E+ + +L+G +R                V+ KV+++ +GV  A+ +  +G A+
Sbjct:  120 DLLEAMGINTS-SVEATPSQLNQVGLAFLSATDTYPIMKSIQPIRKMMTNPTIFNITGPIINPFKLDYQVMGVYETSKLEKIAQTLKDLGRKKAIVVYGANGMDEATLSGDNMIYEVNENEATKNYTVNPKDVGLAYAPNEALIGGTPLENLEITKNILTGVDRSAKRDVVVFNAGIALYVAEKVSSIKQGVIEAQRLIDNGNAI 323          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_STAHJ (Anthranilate phosphoribosyltransferase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.724e-23
Identity = 64/205 (31.22%), Postives = 115/205 (56.10%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQE-KIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG-ERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKAL 650
            D+L  LG+      E V   ++E G+ F+ + + +P MK+++PVRK +   T+FNI+GP++NP  + + V+GVY+ + +  +A  L+  G +RA+V+H + G+DE +  G   + ++ +   I  +  +  DYG+   + + LQGG P  N  +   +LSG ++                VS KV+T+A G++LA  +  SG+A+
Sbjct:  120 DLLNELGIKTTKVSE-VPLQIEEQGLAFISAMESYPIMKYIQPVRKMISTPTIFNIVGPLINPFKLTYQVLGVYDPSRLYMIAQTLKDLGRRRAIVLHGANGMDEATLSGNNEVYELNENGDITHYFINAKDYGLKVASNQDLQGGSPKENKMITLDILSGDDKTCRRDVVVLNAALALYVSEKVDTIASGISLATILIDSGRAM 323          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_BACLD (Anthranilate phosphoribosyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.724e-23
Identity = 72/209 (34.45%), Postives = 105/209 (50.24%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG--XXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 662
            DVLE LGV I   PE   + ++   +GF+ +  YH +MK V   RK L  +TVFN+LGP+ NP      V+GVY+      MA AL+ F  +  L V S +GLDE+S   P  ++++   K   ++ +P D G+P   L  +Q   P  +  ++  +L   RG                 V+ +   L EGVALA E    G+ALN L+
Sbjct:  120 DVLEYLGVSIQTSPEETIKSIERRNMGFLYAPSYHSSMKHVAGARKDLAFRTVFNLLGPLSNPMKAKRQVIGVYSIEKAKLMARALEAFEPEHVLFVSSRDGLDELSITSPTDVIELKGGKTYEYTVEPGDVGLPLGRLRDIQVATPEESGRLIVDILK-NRGPDSAVHIAAFNAGAALYVAEQAADLKEGVALALEAVAGGEALNQLE 327          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_LEPIN (Anthranilate phosphoribosyltransferase OS=Leptospira interrogans GN=trpD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.139e-22
Identity = 68/201 (33.83%), Postives = 97/201 (48.26%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGK 644
            D+L  LG   +   E V   +   G  F+ +  +HP+MK   PVRK+L  +TVFN++GP+ NP    F ++GVY   L+      LQ  GLKRALV HS +GLDE S         +    I R SFDP   G+     E +      +   + R+VL+ E                 V  K++T+ +G  +A+E  LSGK
Sbjct:  124 DILTRLGYQTETTQEEVEAHLVNRGFTFLFAPMWHPSMKHAGPVRKELGFRTVFNMIGPLSNPFSPQFQIIGVYQPELMELFIKVLQSLGLKRALVCHSRDGLDEFSIFQITDYTFLENGVISRHSFDPKILGLSSLNKEEVYASSSDHAEVLARKVLNSESIAGTHAVALNAGAGLFVMGKIDTIEQGYQIAKEAILSGK 324          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_LEPIC (Anthranilate phosphoribosyltransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=trpD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.139e-22
Identity = 68/201 (33.83%), Postives = 97/201 (48.26%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGK 644
            D+L  LG   +   E V   +   G  F+ +  +HP+MK   PVRK+L  +TVFN++GP+ NP    F ++GVY   L+      LQ  GLKRALV HS +GLDE S         +    I R SFDP   G+     E +      +   + R+VL+ E                 V  K++T+ +G  +A+E  LSGK
Sbjct:  124 DILTRLGYQTETTQEEVEAHLVNRGFTFLFAPMWHPSMKHAGPVRKELGFRTVFNMIGPLSNPFSPQFQIIGVYQPELMELFIKVLQSLGLKRALVCHSRDGLDEFSIFQITDYTFLENGVISRHSFDPKILGLSSLNKEEVYASSSDHAEVLARKVLNSESIAGTHAVALNAGAGLFVMGKIDTIEQGYQIAKEAILSGK 324          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_ALCBS (Anthranilate phosphoribosyltransferase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.139e-22
Identity = 55/142 (38.73%), Postives = 85/142 (59.86%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESL 467
            D+LE  G+ +DL P  + +CVD  G+GFM +  +H AMK+    RK+L ++T+FNILGPM NPA V   V+GV++E L   +A  + R G +  +VVHS +GLDE+S      + +    +++ +   P D G+   +L  L
Sbjct:  124 DLLETAGIALDLSPAQIGQCVDNVGVGFMFAPNHHKAMKYAVGPRKELGMRTLFNILGPMTNPAGVQRLVMGVFSEKLCRPLAEVMGRLGGEHIMVVHSKDGLDEISLAARTHVAEFRDGEVKEYDLTPEDLGLGSDSLVGL 265          
BLAST of DY258666 vs. ExPASy Swiss-Prot
Match: TRPD_LEPBL (Anthranilate phosphoribosyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.488e-22
Identity = 70/201 (34.83%), Postives = 94/201 (46.77%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGK 644
            D+L  LG   +   E V   +   G  F+ +  +HP+MK+   VRK+L  +TVFN++GP+ NP    F ++GVY   L       LQ  GLKRALV HS +GLDE S         +  E I R SFDP   G      E +      +   + RRVL+ E                 V  KV T+ +G  +A E  LSGK
Sbjct:  124 DILARLGYQTEATQEEVEAHLISRGFTFLFAPMWHPSMKYAGSVRKELGFRTVFNMIGPLSNPFSPQFQIIGVYQPELTELFIKVLQYLGLKRALVCHSRDGLDEFSIFQTTDYTLLENEVISRHSFDPRTLGFSSLKREEVYADSSEHAEVLARRVLNSEPIAGTHAVALNAGAGLFVMGKVKTIEQGYKIAWEALLSGK 324          
The following BLAST results are available for this feature:
BLAST of DY258666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPCD_ARCFU3.916e-2337.50Tryptophan biosynthesis protein trpCD OS=Archaeogl... [more]
TRPD_PYRAR5.114e-2334.57Anthranilate phosphoribosyltransferase OS=Pyrobacu... [more]
TRPD_DICT65.114e-2331.82Anthranilate phosphoribosyltransferase OS=Dictyogl... [more]
TRPD_STAS18.724e-2330.73Anthranilate phosphoribosyltransferase OS=Staphylo... [more]
TRPD_STAHJ8.724e-2331.22Anthranilate phosphoribosyltransferase OS=Staphylo... [more]
TRPD_BACLD8.724e-2334.45Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_LEPIN1.139e-2233.83Anthranilate phosphoribosyltransferase OS=Leptospi... [more]
TRPD_LEPIC1.139e-2233.83Anthranilate phosphoribosyltransferase OS=Leptospi... [more]
TRPD_ALCBS1.139e-2238.73Anthranilate phosphoribosyltransferase OS=Alcanivo... [more]
TRPD_LEPBL1.488e-2234.83Anthranilate phosphoribosyltransferase OS=Leptospi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DG06FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258666 ID=DY258666; Name=DY258666; organism=Citrus clementina; type=EST; length=916bp
CTCAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTG
TTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAG
GTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACAAAGTATCACC
CTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACT
GTATTCAATATATTGGGTCCTATGTTGAATCCTGCATGTGTGCCATTCGC
TGTGGTTGGTGTTTACAATGAAAACTTGGTACTCAAAATGGCCAATGCAC
TGCAACGATTTGGCCTGAAAAGAGCATTGGTTGTTCACTCAGAGGGTTTG
GATGAGATGAGTCCCCTTGGACCTGGTCTGATCCTTGATGTCACCCAAGA
AAAAATTGAGAGATTCTCATTTGATCCATTGGACTACGGCATTCCTCGCT
GCACTTTAGAAAGCTTGCAAGGTGGAGGCCCAGCATATAATGCAGAGGTC
TTAAGGCGTGTACTGTCTGGAGAAAGAGGGGCAATAGCTGATGCATTAAT
CCTAAATGCTGCAGCAGCACTCTTGGTCAGTTGCAAAGTGAACACCTTGG
CTGAGGGTGTAGCCCTGGCGCGTGAAATTCAATTATCAGGGAAAGCTCTT
AATACGCTGGATTTATGGATAGAAGTCTCAAAGGGGGCGCCAGCATTTGC
TTGTGCATGAGTAATGGAGTTTTGAAGACTAAGAAAGACTTCATTGCAGT
ACCATGAATAACAGGTAGGTCAAAAGTTGGCTTGCTTATGCACGTCTCGT
CGATCAACTATTAGAAAGAAATTAAAAGTCCCTAAATTAATATTGTTTAT
TGTAATGTATCAAAAGTATTGGCTTATGGAATGTATTATGGTAATGTTGA
ATACTTTTTTTGGGCA
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