DY258669

Overview
NameDY258669
Unique NameDY258669
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1234
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_BACC0 (6,7-dimethyl-8-ribityllumazine synthase OS=Bacillus cereus (strain AH820) GN=ribH PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.327e-38
Identity = 78/151 (51.66%), Postives = 107/151 (70.86%), Query Frame = 3
Query:  204 HLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFEH 656
            HL G      GL+  +VV RFNE +T  LL GAL+  K++ V+E +IDV WVPG+FEI ++A+++  SGKY+AV+ +G V+RG TTHYD V N  A GV S  + + +P IFGVLT + ++QA+ RAG K+GNKG E+A+ AIEMA L +H
Sbjct:    6 HLVG-----TGLKVGVVVGRFNEFITSKLLGGALDGLKRHGVEENDIDVAWVPGAFEIPLIAKKMANSGKYDAVITLGTVIRGATTHYDYVCNEVAKGVASLSLQTDIPVIFGVLTTETIEQAIERAGTKAGNKGYESAVAAIEMAHLSKH 151          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_BACAN (6,7-dimethyl-8-ribityllumazine synthase OS=Bacillus anthracis GN=ribH PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.327e-38
Identity = 78/151 (51.66%), Postives = 107/151 (70.86%), Query Frame = 3
Query:  204 HLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFEH 656
            HL G      GL+  +VV RFNE +T  LL GAL+  K++ V+E +IDV WVPG+FEI ++A+++  SGKY+AV+ +G V+RG TTHYD V N  A GV S  + + +P IFGVLT + ++QA+ RAG K+GNKG E+A+ AIEMA L +H
Sbjct:    6 HLVG-----TGLKVGVVVGRFNEFITSKLLGGALDGLKRHGVEENDIDVAWVPGAFEIPLIAKKMANSGKYDAVITLGTVIRGATTHYDYVCNEVAKGVASLSLQTDIPVIFGVLTTETIEQAIERAGTKAGNKGYESAVAAIEMAHLSKH 151          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_BACAC (6,7-dimethyl-8-ribityllumazine synthase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=ribH PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.327e-38
Identity = 78/151 (51.66%), Postives = 107/151 (70.86%), Query Frame = 3
Query:  204 HLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFEH 656
            HL G      GL+  +VV RFNE +T  LL GAL+  K++ V+E +IDV WVPG+FEI ++A+++  SGKY+AV+ +G V+RG TTHYD V N  A GV S  + + +P IFGVLT + ++QA+ RAG K+GNKG E+A+ AIEMA L +H
Sbjct:    6 HLVG-----TGLKVGVVVGRFNEFITSKLLGGALDGLKRHGVEENDIDVAWVPGAFEIPLIAKKMANSGKYDAVITLGTVIRGATTHYDYVCNEVAKGVASLSLQTDIPVIFGVLTTETIEQAIERAGTKAGNKGYESAVAAIEMAHLSKH 151          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_BACAA (6,7-dimethyl-8-ribityllumazine synthase OS=Bacillus anthracis (strain A0248) GN=ribH PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.327e-38
Identity = 78/151 (51.66%), Postives = 107/151 (70.86%), Query Frame = 3
Query:  204 HLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFEH 656
            HL G      GL+  +VV RFNE +T  LL GAL+  K++ V+E +IDV WVPG+FEI ++A+++  SGKY+AV+ +G V+RG TTHYD V N  A GV S  + + +P IFGVLT + ++QA+ RAG K+GNKG E+A+ AIEMA L +H
Sbjct:    6 HLVG-----TGLKVGVVVGRFNEFITSKLLGGALDGLKRHGVEENDIDVAWVPGAFEIPLIAKKMANSGKYDAVITLGTVIRGATTHYDYVCNEVAKGVASLSLQTDIPVIFGVLTTETIEQAIERAGTKAGNKGYESAVAAIEMAHLSKH 151          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_CLONN (6,7-dimethyl-8-ribityllumazine synthase OS=Clostridium novyi (strain NT) GN=ribH PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.733e-38
Identity = 71/140 (50.71%), Postives = 109/140 (77.86%), Query Frame = 3
Query:  228 NEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            +EG ++ +VV RFNE +   LL GAL+  K++ VKE+ I++ WVPG+FEI +VA+++ K+ KY++V+C+GAV++G T H+D V++  + G+ +  +++ VP IFGVLT DN++QA+ RAG K+GNKG EAA+TAIEMA+L
Sbjct:   10 SEGKKYGIVVGRFNEFIGSKLLSGALDALKRHGVKEDEIEISWVPGAFEIPLVAKKMAKTKKYDSVICLGAVIKGSTAHFDYVSSEVSKGIANVSLDTEVPVIFGVLTTDNIEQAIERAGTKAGNKGYEAAVTAIEMANL 149          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_ACIF5 (6,7-dimethyl-8-ribityllumazine synthase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=ribH PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.733e-38
Identity = 76/150 (50.67%), Postives = 111/150 (74.00%), Query Frame = 3
Query:  198 VRHLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            +RH+ G L   E  RFAL+V+RFN  +T+ L +GA++  +++  KEE + VV VPG++E+ ++AQ+L +SG Y+AVLC+GAV+RG T H+D VA   + GV    M++GVP IFGVLT D+++QA+ RAG K+GNKG +AA+TA+EM  L
Sbjct:    2 IRHIEGSLQAGEH-RFALLVSRFNSFITQQLEQGAIDALRRHGAKEEQLHVVHVPGAYEMPLIAQKLARSGNYDAVLCLGAVIRGGTPHFDYVAAEVSKGVAQVSMDTGVPVIFGVLTTDSIEQAIERAGTKAGNKGFDAAMTALEMVQL 150          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_ACIF2 (6,7-dimethyl-8-ribityllumazine synthase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=ribH PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.733e-38
Identity = 76/150 (50.67%), Postives = 111/150 (74.00%), Query Frame = 3
Query:  198 VRHLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            +RH+ G L   E  RFAL+V+RFN  +T+ L +GA++  +++  KEE + VV VPG++E+ ++AQ+L +SG Y+AVLC+GAV+RG T H+D VA   + GV    M++GVP IFGVLT D+++QA+ RAG K+GNKG +AA+TA+EM  L
Sbjct:    2 IRHIEGSLQAGEH-RFALLVSRFNSFITQQLEQGAIDALRRHGAKEEQLHVVHVPGAYEMPLIAQKLARSGNYDAVLCLGAVIRGGTPHFDYVAAEVSKGVAQVSMDTGVPVIFGVLTTDSIEQAIERAGTKAGNKGFDAAMTALEMVQL 150          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_THEP3 (6,7-dimethyl-8-ribityllumazine synthase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=ribH PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 2.264e-38
Identity = 73/141 (51.77%), Postives = 107/141 (75.89%), Query Frame = 3
Query:  231 EGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFE 653
            EG +F +VV+RFNE +T  LLEGAL+  K++    E+I++ WVPG+FEI ++A+++ +S +Y+AV+ +GAV+RG+T H+D VAN  + G+    +++ VP IFGVLT D ++QA+ RAG K GNKG EAA+TAIEMA+L E
Sbjct:   11 EGKKFGIVVSRFNEFITNKLLEGALDALKRHGALNEDIEIAWVPGAFEIPLIAKKMAESKRYDAVIALGAVIRGETPHFDYVANEVSKGIAKISLDTEVPVIFGVLTTDTIEQAIVRAGTKGGNKGFEAAVTAIEMANLME 151          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_LACLA (6,7-dimethyl-8-ribityllumazine synthase OS=Lactococcus lactis subsp. lactis GN=ribH PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 2.264e-38
Identity = 69/141 (48.94%), Postives = 101/141 (71.63%), Query Frame = 3
Query:  225 KNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            + E  ++ +VVA+FNE +   LL GAL+  K++ V+EE ID+ WVPG+FEI ++AQ++  S KY A++C+G V+RG T+HYD V N  + G+    +NS +P +FGVLT +N++QA+ RAG K+GNKG E A+ AIEM  L
Sbjct:    9 RTENAKYGIVVAQFNEFINAKLLSGALDALKRHGVQEEEIDIAWVPGAFEIPIIAQKMATSNKYEAIICLGTVIRGSTSHYDFVCNEVSKGIAHVSLNSNIPVMFGVLTTENIEQAIERAGTKAGNKGFEVAVGAIEMVDL 149          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_SYNFM (6,7-dimethyl-8-ribityllumazine synthase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=ribH PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.956e-38
Identity = 75/141 (53.19%), Postives = 107/141 (75.89%), Query Frame = 3
Query:  231 EGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFE 653
            +GLRF +VV+RFN+ + + LL GAL+  K+   +E+NIDV  VPG+FEI +VA++   +G+Y+AV+C+GAV+RG T H+D VAN  + G+  AG+ +GVP  FGVLT D ++QA+ RAG KSGNKG +AA+ AIEMA+L +
Sbjct:   11 QGLRFGIVVSRFNDFIGERLLGGALDALKRSGAEEKNIDVFKVPGAFEIPLVAKKAASTGRYDAVICLGAVIRGATPHFDYVANEVSKGIAHAGLEAGVPISFGVLTTDTIEQAIERAGSKSGNKGWDAAVAAIEMANLIK 151          
The following BLAST results are available for this feature:
BLAST of DY258669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RISB_BACC01.327e-3851.666,7-dimethyl-8-ribityllumazine synthase OS=Bacillu... [more]
RISB_BACAN1.327e-3851.666,7-dimethyl-8-ribityllumazine synthase OS=Bacillu... [more]
RISB_BACAC1.327e-3851.666,7-dimethyl-8-ribityllumazine synthase OS=Bacillu... [more]
RISB_BACAA1.327e-3851.666,7-dimethyl-8-ribityllumazine synthase OS=Bacillu... [more]
RISB_CLONN1.733e-3850.716,7-dimethyl-8-ribityllumazine synthase OS=Clostri... [more]
RISB_ACIF51.733e-3850.676,7-dimethyl-8-ribityllumazine synthase OS=Acidith... [more]
RISB_ACIF21.733e-3850.676,7-dimethyl-8-ribityllumazine synthase OS=Acidith... [more]
RISB_THEP32.264e-3851.776,7-dimethyl-8-ribityllumazine synthase OS=Thermoa... [more]
RISB_LACLA2.264e-3848.946,7-dimethyl-8-ribityllumazine synthase OS=Lactoco... [more]
RISB_SYNFM2.956e-3853.196,7-dimethyl-8-ribityllumazine synthase OS=Syntrop... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DG11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258669 ID=DY258669; Name=DY258669; organism=Citrus clementina; type=EST; length=1234bp
TCAGAACAAAAATGGCTTTAAACCTCAAAACAACAATTCATCACTCTCCT
CTCGCATCATCATCTCGTCAATTCATTAATGGGTTTTCTCCAAAACCAAC
TTCTATGTCCTTTTCACATTCTTCTTCACTCAAAGGATTTGGAACCCAGA
TTGCGATTGAGAGGAAGGAACGTTTATCGTTTGTACAAACGGAAGCTGTG
AGGCATTTGACTGGATTCCTTACAAAAAATGAGGGGCTCCGTTTTGCTTT
GGTTGTTGCACGGTTTAATGAGCTTGTGACAAAACTACTGTTAGAGGGAG
CTTTGGAGACCTTCAAGAAGTATTCAGTTAAAGAAGAAAACATTGATGTT
GTGTGGGTTCCTGGTAGTTTTGAAATTGGTGTTGTTGCACAACAGCTAGG
GAAGTCTGGGAAGTATAATGCAGTTTTGTGTATTGGTGCCGTGGTTAGAG
GTGATACTACTCACTATGATGCTGTAGCTAATTCTGCTGCATCCGGAGTT
CTTTCAGCTGGCATGAATTCAGGTGTTCCATGCATATTTGGTGTCCTGAC
TTGCGATAACATGGACCAGGCTTTGAATCGAGCTGGTGGTAAATCTGGGA
ATAAGGGTGCTGAGGCAGCTTTGACTGCTATTGAAATGGCATCTTTATTT
GAGCACCACCTGAAGTAGTGGTTTCACCAAGAAGAGTTGGACAGAGTCCT
TTTTCCGCTCATATTTTCTTTTTGAGAAAGTGGCCTTTTGTTGTAGTTTC
ATGATACCTGAAGCCTTTGTATGGACAGTTTTGGGATCTGCAAAAGGTTA
GCCTTAGCATTCCAAAATAAGATNAGCAAATTGTTCACTGCCTTCATACT
GGGAAACTTTTTCCTGCGCGTCACCCAGATACTGAAAAAACATTCCGTAA
TGTTCTGAATCAAAAACAATCTGGAATTCTGTATGCCTTCCCAAATGTTT
TTTCTAAATGAAAATAATCAAAAAAAAAGGCATTTGCATCCATGAATTGA
GGGCAAAATTGGAGGGAATATATGGGTGGTTTTTTGAAAAAACGAAAAAG
GGGGGACCTTTGCAACCAACCCTAATTTCCCTGGGTTTTGGGGAAAAAAA
ATTTGGATTTCAGGGGGGAAAAAAAAAAAAAAAGAAAAAGGGGGTATGGG
GTAAAGGTCTTTTGTCTTTGGAAATTTGTCCTAAATTTTTGCCTTATTTT
AGGTAAAATATTTTTCTTTTTTTTTTTTTTTTTA
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