DY258669

Overview
NameDY258669
Unique NameDY258669
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1234
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_GEOSW (6,7-dimethyl-8-ribityllumazine synthase OS=Geobacillus sp. (strain WCH70) GN=ribH PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 6.586e-38
Identity = 73/138 (52.90%), Postives = 106/138 (76.81%), Query Frame = 3
Query:  234 GLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            GL+ A+V++RFNE +T  LL GA++  K++ V E ++ V WVPG+FEI ++A++L +S +Y+AV+ +GAV+RG T+HYD V N  A GV  A +++G P IFGVLT D ++QA+ RAG K+GNKG EAA++AIEMA+L
Sbjct:   12 GLKIAIVISRFNEFITSKLLSGAMDGLKRHGVNENDVTVAWVPGAFEIPLIAKKLAESRQYDAVIALGAVIRGATSHYDYVCNEVAKGVSHAALSTGTPVIFGVLTTDTIEQAIERAGTKAGNKGWEAAVSAIEMANL 149          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_ACTP2 (6,7-dimethyl-8-ribityllumazine synthase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=ribH PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 6.586e-38
Identity = 74/149 (49.66%), Postives = 107/149 (71.81%), Query Frame = 3
Query:  207 LTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFE 653
            +TG L    GL+F +V ARFN+ +   LL GA++T  ++   E +ID  WVPG+FEI +VA+++  SGKY+AV+C+G V+ G TTHYD V N AA G+ +  + +GVP IFGVLT +N++QA+ RAG K+GNKG+E AL AIE+ ++ +
Sbjct:    4 ITGNLVAT-GLKFGIVTARFNDFINDKLLSGAIDTLVRHGAYENDIDTAWVPGAFEIPLVAKKMATSGKYDAVICLGTVISGSTTHYDYVCNEAAKGIGAVALETGVPVIFGVLTTENIEQAIERAGTKAGNKGSECALGAIEIVNVLK 151          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_CLOBB (6,7-dimethyl-8-ribityllumazine synthase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=ribH PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 8.601e-38
Identity = 70/141 (49.65%), Postives = 107/141 (75.89%), Query Frame = 3
Query:  231 EGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFE 653
            EGL+  ++V RFNE +   LL+GAL+ FK++ V  E+IDV WVPG+FE+ ++A+++ KS KY+AV+C+GAV++G T+HYD V +  + G+ +  + +G P +FGVLT +N++QA+ RAG K+GNKG E A+ AIEMA+L +
Sbjct:   11 EGLKVGIIVGRFNEFIGSKLLDGALDGFKRHGVNVEDIDVAWVPGAFEMPLIAKKMAKSPKYDAVICLGAVIKGSTSHYDYVCSEVSKGIANVSLETGKPVMFGVLTTNNIEQAIERAGTKAGNKGYECAVGAIEMANLIK 151          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_CLOAB (6,7-dimethyl-8-ribityllumazine synthase OS=Clostridium acetobutylicum GN=ribH PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 8.601e-38
Identity = 68/142 (47.89%), Postives = 107/142 (75.35%), Query Frame = 3
Query:  228 NEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFE 653
            ++ L+F +V  RFNE +   LL GA++  K++   E++I++ W PG+FEI +++Q++ +SGKY+AV+C+GAV+RG T+H+D V++  + G+    + +G P IFGVLT DN++QA+ RAG KSGNKG +AA+TAIEMA+L +
Sbjct:   10 SKNLKFGIVAGRFNEFIVSKLLSGAVDALKRHGCDEDSIELAWAPGAFEIPLISQKMAESGKYDAVICLGAVIRGATSHFDYVSSEVSKGIAQTSLKTGCPVIFGVLTTDNIEQAIERAGTKSGNKGFDAAVTAIEMANLIK 151          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_BACWK (6,7-dimethyl-8-ribityllumazine synthase OS=Bacillus weihenstephanensis (strain KBAB4) GN=ribH PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 8.601e-38
Identity = 77/148 (52.03%), Postives = 105/148 (70.95%), Query Frame = 3
Query:  204 HLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            HL G      GL+  +VV RFNE +T  LL GAL+  K++ V+E +IDV WVPG+FEI ++A+++  SGKY+AV+ +G V+RG TTHYD V N  A GV S  + + +P IFGVLT + ++QA+ RAG K+GNKG E+A+ AIEMA L
Sbjct:    6 HLVG-----TGLKVGVVVGRFNEFITSKLLGGALDGLKRHGVEENDIDVAWVPGAFEIPLIAKKMANSGKYDAVITLGTVIRGATTHYDYVCNEVAKGVASLSLQTDIPVIFGVLTTETIEQAIERAGTKAGNKGYESAVAAIEMAHL 148          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_BACLD (6,7-dimethyl-8-ribityllumazine synthase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=ribH PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 8.601e-38
Identity = 73/137 (53.28%), Postives = 106/137 (77.37%), Query Frame = 3
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            L+  +VV+RFN+ +T  LL GA +T  ++ VK ++IDV WVPG+FEI ++A+++ ++ KY+AV+ +G V+RG T+HYD V N AA G+ ++ M++GVP IFGVLT D ++QA+ RAG K+GNKGAEAA  AIEMA+L
Sbjct:   13 LKIGIVVSRFNDFITSKLLSGAEDTLLRHGVKADDIDVAWVPGAFEIPLIAKKMAETKKYDAVITLGTVIRGATSHYDYVCNEAAKGIAASSMSTGVPVIFGVLTTDTIEQAVERAGTKAGNKGAEAAAAAIEMANL 149          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_BACHK (6,7-dimethyl-8-ribityllumazine synthase OS=Bacillus thuringiensis subsp. konkukian GN=ribH PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 8.601e-38
Identity = 77/148 (52.03%), Postives = 105/148 (70.95%), Query Frame = 3
Query:  204 HLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            HL G      GL+  +VV RFNE +T  LL GAL+  K++ V+E +IDV WVPG+FEI ++A+++  SGKY+AV+ +G V+RG TTHYD V N  A GV S  + + +P IFGVLT + ++QA+ RAG K+GNKG E+A+ AIEMA L
Sbjct:    6 HLVG-----TGLKVGVVVGRFNEFITSKLLGGALDGLKRHGVEENDIDVAWVPGAFEIPLIAKKMANSGKYDAVITLGTVIRGATTHYDYVCNEVAKGVASLSLQTDIPVIFGVLTTETIEQAIERAGTKAGNKGYESAVAAIEMAHL 148          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_BACCZ (6,7-dimethyl-8-ribityllumazine synthase OS=Bacillus cereus (strain ZK / E33L) GN=ribH PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 8.601e-38
Identity = 77/148 (52.03%), Postives = 105/148 (70.95%), Query Frame = 3
Query:  204 HLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            HL G      GL+  +VV RFNE +T  LL GAL+  K++ V+E +IDV WVPG+FEI ++A+++  SGKY+AV+ +G V+RG TTHYD V N  A GV S  + + +P IFGVLT + ++QA+ RAG K+GNKG E+A+ AIEMA L
Sbjct:    6 HLVG-----TGLKVGVVVGRFNEFITSKLLGGALDGLKRHGVEENDIDVAWVPGAFEIPLIAKKMANSGKYDAVITLGTVIRGATTHYDYVCNEVAKGVASLSLQTDIPVIFGVLTTETIEQAIERAGTKAGNKGYESAVAAIEMAHL 148          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_BACC3 (6,7-dimethyl-8-ribityllumazine synthase OS=Bacillus cereus (strain 03BB102) GN=ribH PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 8.601e-38
Identity = 77/148 (52.03%), Postives = 105/148 (70.95%), Query Frame = 3
Query:  204 HLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            HL G      GL+  +VV RFNE +T  LL GAL+  K++ V+E +IDV WVPG+FEI ++A+++  SGKY+AV+ +G V+RG TTHYD V N  A GV S  + + +P IFGVLT + ++QA+ RAG K+GNKG E+A+ AIEMA L
Sbjct:    6 HLVG-----TGLKVGVVVGRFNEFITSKLLGGALDGLKRHGVEENDIDVAWVPGAFEIPLIAKKMANSGKYDAVITLGTVIRGATTHYDYVCNEVAKGVASLSLQTDIPVIFGVLTTETIEQAIERAGTKAGNKGYESAVAAIEMAHL 148          
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_BACAH (6,7-dimethyl-8-ribityllumazine synthase OS=Bacillus thuringiensis (strain Al Hakam) GN=ribH PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 8.601e-38
Identity = 77/148 (52.03%), Postives = 105/148 (70.95%), Query Frame = 3
Query:  204 HLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            HL G      GL+  +VV RFNE +T  LL GAL+  K++ V+E +IDV WVPG+FEI ++A+++  SGKY+AV+ +G V+RG TTHYD V N  A GV S  + + +P IFGVLT + ++QA+ RAG K+GNKG E+A+ AIEMA L
Sbjct:    6 HLVG-----TGLKVGVVVGRFNEFITSKLLGGALDGLKRHGVEENDIDVAWVPGAFEIPLIAKKMANSGKYDAVITLGTVIRGATTHYDYVCNEVAKGVASLSLQTDIPVIFGVLTTETIEQAIERAGTKAGNKGYESAVAAIEMAHL 148          
The following BLAST results are available for this feature:
BLAST of DY258669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RISB_GEOSW6.586e-3852.906,7-dimethyl-8-ribityllumazine synthase OS=Geobaci... [more]
RISB_ACTP26.586e-3849.666,7-dimethyl-8-ribityllumazine synthase OS=Actinob... [more]
RISB_CLOBB8.601e-3849.656,7-dimethyl-8-ribityllumazine synthase OS=Clostri... [more]
RISB_CLOAB8.601e-3847.896,7-dimethyl-8-ribityllumazine synthase OS=Clostri... [more]
RISB_BACWK8.601e-3852.036,7-dimethyl-8-ribityllumazine synthase OS=Bacillu... [more]
RISB_BACLD8.601e-3853.286,7-dimethyl-8-ribityllumazine synthase OS=Bacillu... [more]
RISB_BACHK8.601e-3852.036,7-dimethyl-8-ribityllumazine synthase OS=Bacillu... [more]
RISB_BACCZ8.601e-3852.036,7-dimethyl-8-ribityllumazine synthase OS=Bacillu... [more]
RISB_BACC38.601e-3852.036,7-dimethyl-8-ribityllumazine synthase OS=Bacillu... [more]
RISB_BACAH8.601e-3852.036,7-dimethyl-8-ribityllumazine synthase OS=Bacillu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DG11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258669 ID=DY258669; Name=DY258669; organism=Citrus clementina; type=EST; length=1234bp
TCAGAACAAAAATGGCTTTAAACCTCAAAACAACAATTCATCACTCTCCT
CTCGCATCATCATCTCGTCAATTCATTAATGGGTTTTCTCCAAAACCAAC
TTCTATGTCCTTTTCACATTCTTCTTCACTCAAAGGATTTGGAACCCAGA
TTGCGATTGAGAGGAAGGAACGTTTATCGTTTGTACAAACGGAAGCTGTG
AGGCATTTGACTGGATTCCTTACAAAAAATGAGGGGCTCCGTTTTGCTTT
GGTTGTTGCACGGTTTAATGAGCTTGTGACAAAACTACTGTTAGAGGGAG
CTTTGGAGACCTTCAAGAAGTATTCAGTTAAAGAAGAAAACATTGATGTT
GTGTGGGTTCCTGGTAGTTTTGAAATTGGTGTTGTTGCACAACAGCTAGG
GAAGTCTGGGAAGTATAATGCAGTTTTGTGTATTGGTGCCGTGGTTAGAG
GTGATACTACTCACTATGATGCTGTAGCTAATTCTGCTGCATCCGGAGTT
CTTTCAGCTGGCATGAATTCAGGTGTTCCATGCATATTTGGTGTCCTGAC
TTGCGATAACATGGACCAGGCTTTGAATCGAGCTGGTGGTAAATCTGGGA
ATAAGGGTGCTGAGGCAGCTTTGACTGCTATTGAAATGGCATCTTTATTT
GAGCACCACCTGAAGTAGTGGTTTCACCAAGAAGAGTTGGACAGAGTCCT
TTTTCCGCTCATATTTTCTTTTTGAGAAAGTGGCCTTTTGTTGTAGTTTC
ATGATACCTGAAGCCTTTGTATGGACAGTTTTGGGATCTGCAAAAGGTTA
GCCTTAGCATTCCAAAATAAGATNAGCAAATTGTTCACTGCCTTCATACT
GGGAAACTTTTTCCTGCGCGTCACCCAGATACTGAAAAAACATTCCGTAA
TGTTCTGAATCAAAAACAATCTGGAATTCTGTATGCCTTCCCAAATGTTT
TTTCTAAATGAAAATAATCAAAAAAAAAGGCATTTGCATCCATGAATTGA
GGGCAAAATTGGAGGGAATATATGGGTGGTTTTTTGAAAAAACGAAAAAG
GGGGGACCTTTGCAACCAACCCTAATTTCCCTGGGTTTTGGGGAAAAAAA
ATTTGGATTTCAGGGGGGAAAAAAAAAAAAAAAGAAAAAGGGGGTATGGG
GTAAAGGTCTTTTGTCTTTGGAAATTTGTCCTAAATTTTTGCCTTATTTT
AGGTAAAATATTTTTCTTTTTTTTTTTTTTTTTA
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