DY258669
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_METFK (6,7-dimethyl-8-ribityllumazine synthase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=ribH PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.203e-17 Identity = 45/139 (32.37%), Postives = 83/139 (59.71%), Query Frame = 3 Query: 237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFE 653 LR +V++RFN + + LL+ ++ K V +++I + VPG+ E + Q+ S +++ ++ +GAV+RG+T H++ V+N +A G+ +++G+P +LT +N +QA R KGAEAA +EM +L + Sbjct: 13 LRIGIVLSRFNSNIGEGLLKACVDQLHKLGVADDDITLATVPGALEAPAILLQMADSEQFDGLIALGAVIRGETYHFEVVSNESARGISDVQLSTGIPIANAILTTENDEQAEARV----AVKGAEAADVVVEMINLLK 147
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_KOCRD (6,7-dimethyl-8-ribityllumazine synthase OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=ribH PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.203e-17 Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 3 Query: 237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAG--GKSGNKGAEAALTAIEMA 641 LR A+V A ++ + LL+GA + ++ V VPGSFE+ V A +L +G +AV+ +G VVRG T H+D V ++A SG+ + +G P FG+LTCD +Q L+RAG G +KG EAA A+ A Sbjct: 19 LRVAVVAASWHTTIMDGLLDGARRALA--DARAGHVVQVRVPGSFELPVAASRL--AGDVDAVVALGVVVRGGTPHFDYVCHAATSGLTEVSVRTGTPVGFGLLTCDTEEQGLDRAGLEGSHEDKGYEAAHAALSTA 151
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_NOCSJ (6,7-dimethyl-8-ribityllumazine synthase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=ribH PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.757e-17 Identity = 53/134 (39.55%), Postives = 75/134 (55.97%), Query Frame = 3 Query: 237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAG--GKSGNKGAEAALTAI 632 LR A+V A ++ V L+ GA Y V E + V VPG+FE+ VVA L + Y+ V+ +G V+RG T H+D V + G++ ++ +P FGVLTCD QAL+RAG G +KG EA A+ Sbjct: 17 LRVAVVAASWHTQVMDGLIAGAQRALADYHVAEHRL--VRVPGAFELAVVADALARQ-HYDVVVALGVVIRGGTPHFDYVCQAVTEGLVRVALDRSLPVGFGVLTCDGDQQALDRAGLEGSKEDKGYEATSAAL 147
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_CLAM3 (6,7-dimethyl-8-ribityllumazine synthase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=ribH PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.093e-16 Identity = 54/142 (38.03%), Postives = 84/142 (59.15%), Query Frame = 3 Query: 234 GLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAG--GKSGNKGAEAALTAIEMASLFE 653 GLR +V R+++ ++ LL GA V V+ VPGSFE+ VVA+ +G +AV+ +G ++RG T H++ V+++A SG+ A + +G P FG+LT D+ Q ++RAG G +KGAEAA A+ A L + Sbjct: 18 GLRVTVVAGRWHDEISAGLLAGARRVLDAAGV---TTTVIRVPGSFELPVVARAALDAGA-DAVVALGVIIRGGTPHFEYVSDAATSGLTQASLLAGKPIGFGLLTLDDEQQGIDRAGLPGSKEDKGAEAAEAAVTTALLLK 155
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_CHLPN (6,7-dimethyl-8-ribityllumazine synthase OS=Chlamydia pneumoniae GN=ribH PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.428e-16 Identity = 47/152 (30.92%), Postives = 85/152 (55.92%), Query Frame = 3 Query: 198 VRHLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIG-VVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLF 650 ++ L G L+ + LR A+V + FN+ + L+ G ETF K+ E+ + + VPG+FEI + + L K++A++ G +++G+T HY+ + N A+G+ + + +P ++ + + A R+G K + G TAIEMA+LF Sbjct: 1 MKTLKGHLSA-KNLRIAIVGSCFNQAMADALVSGTQETFLKFGGSEDGLMTIRVPGAFEIPCTIKKLLSSERKFDAIVACGVLIQGETDHYNQIVNQVAAGIGALSLEFCLPITLSIVAAPSAEIAWQRSGIKGRHLGVSGMTTAIEMATLF 151
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_RHOBA (6,7-dimethyl-8-ribityllumazine synthase OS=Rhodopirellula baltica GN=ribH PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.865e-16 Identity = 41/136 (30.15%), Postives = 79/136 (58.09%), Query Frame = 3 Query: 240 RFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647 R A++ +R+N + +++ AL++ + E+ ++ VPG++E+ +Q + + +G V++G+TTH + + + + ++ + SG P FG+LTC+ ++QA+ R+GG GNKG EAA +EM L Sbjct: 15 RVAIIASRYNANICDSMVQAALQSLSDAGIPEDKQWLIRVPGAWELCWAVEQAFQHADVIGAITLGCVIKGETTHDEHINRAVSDTLMEQAVRSGRPVGFGLLTCNTVEQAIQRSGGAVGNKGHEAADAMLEMLRL 150
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_POLNA (6,7-dimethyl-8-ribityllumazine synthase OS=Polaromonas naphthalenivorans (strain CJ2) GN=ribH PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.865e-16 Identity = 48/137 (35.04%), Postives = 75/137 (54.74%), Query Frame = 3 Query: 237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647 L +V ARFNE +T L E L V +NI + VPG+ E+ Q L +S ++A++ +G ++RG+T H++ VAN + S V ++ +P +LT +N+ QA R KG +AA A+EMA+L Sbjct: 17 LSIGIVQARFNEGITNALAEACLRELAALGVDAKNITHLKVPGALEVPCALQALAESENFDALIALGCIIRGETYHFELVANESGSAVTRLALDYQLPIANAILTVENLAQAQAR----QEEKGRDAARVAVEMANL 149
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_SACEN (6,7-dimethyl-8-ribityllumazine synthase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=ribH PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.435e-16 Identity = 54/137 (39.42%), Postives = 77/137 (56.20%), Query Frame = 3 Query: 237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAG--GKSGNKGAEAALTAIEMA 641 LR + R++ +T LLE AL + V E VV VPGS E+ VV QQL +++AV+ +G V+RG T H++ V +S +G+ ++ P GVLTCD +QAL RAG + +KG EA A+E A Sbjct: 17 LRLGIAAIRWHAKITDRLLERALAAASEAGVAEPT--VVRVPGSIELPVVCQQLAH--QHDAVVALGVVIRGGTPHFEYVCDSVTAGLTRVSLDESTPVGNGVLTCDTEEQALARAGFEDSAEDKGFEATAAALETA 149
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_PROAC (6,7-dimethyl-8-ribityllumazine synthase OS=Propionibacterium acnes GN=ribH PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.181e-16 Identity = 52/135 (38.52%), Postives = 79/135 (58.52%), Query Frame = 3 Query: 234 GLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAG--GKSGNKGAEAALTAI 632 GL+ A+V A+++ V LL+GAL V + V+ VPGSFE+ V L + ++A++ +G ++RG T H+D V ++A G+ + + P FG+LTCD+ QAL+RAG G +KG EAA AI Sbjct: 21 GLKVAVVAAQWHGTVMTGLLDGALRGLVDSGVHDPA--VIRVPGSFELPVACASL--ADHFDALVALGVIIRGGTPHFDYVCDAATRGITDVAVRTKTPIGFGILTCDDEAQALDRAGLEGSHEDKGYEAAQAAI 151
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_MYCSS (6,7-dimethyl-8-ribityllumazine synthase OS=Mycobacterium sp. (strain MCS) GN=ribH PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 9.254e-16 Identity = 50/138 (36.23%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 234 GLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAG--GKSGNKGAEAALTAIEMA 641 G++ +V + ++ + LL+GAL+ + +V E VV V G+ EI VVAQ L + + AV+ +G V+RG T H+D V ++ G+ +++ P GVLT + +QAL+RAG G + +KGA+AA A+ A Sbjct: 17 GMKVGIVASTWHSTICDALLDGALKVTESANVSEPT--VVRVLGAIEIPVVAQAL--AADHEAVIALGVVIRGQTPHFDYVCDAVTQGLTRVSLDASTPVANGVLTTNTEEQALDRAGLPGSAEDKGAQAAAAALSTA 150 The following BLAST results are available for this feature:
BLAST of DY258669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258669 ID=DY258669; Name=DY258669; organism=Citrus clementina; type=EST; length=1234bpback to top |