DY258669

Overview
NameDY258669
Unique NameDY258669
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1234
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STRZP (6,7-dimethyl-8-ribityllumazine synthase OS=Streptococcus pneumoniae (strain P1031) GN=ribH PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 5.575e-37
Identity = 69/137 (50.36%), Postives = 103/137 (75.18%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            ++  +VVARFNE +T  LL GAL+  K+ +V E++I+V WVPG+FEI ++A ++ KS KY+A++C+GAV+RG+T+HYD V +  + G+    +NS +P +FGVLT D ++QA+ RAG K+GNKG+E A  AIEM +L
Sbjct:   13 IKIGIVVARFNEFITSKLLSGALDNLKRENVNEKDIEVAWVPGAFEIPLIASKMAKSKKYDAIICLGAVIRGNTSHYDYVCSEVSKGIAQISLNSEIPVMFGVLTTDTIEQAIERAGTKAGNKGSECAQGAIEMVNL 149
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STRZJ (6,7-dimethyl-8-ribityllumazine synthase OS=Streptococcus pneumoniae (strain JJA) GN=ribH PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 5.575e-37
Identity = 69/137 (50.36%), Postives = 103/137 (75.18%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            ++  +VVARFNE +T  LL GAL+  K+ +V E++I+V WVPG+FEI ++A ++ KS KY+A++C+GAV+RG+T+HYD V +  + G+    +NS +P +FGVLT D ++QA+ RAG K+GNKG+E A  AIEM +L
Sbjct:   13 IKIGIVVARFNEFITSKLLSGALDNLKRENVNEKDIEVAWVPGAFEIPLIASKMAKSKKYDAIICLGAVIRGNTSHYDYVCSEVSKGIAQISLNSEIPVMFGVLTTDTIEQAIERAGTKAGNKGSECAQGAIEMVNL 149
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STRR6 (6,7-dimethyl-8-ribityllumazine synthase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ribH PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 5.575e-37
Identity = 69/137 (50.36%), Postives = 103/137 (75.18%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            ++  +VVARFNE +T  LL GAL+  K+ +V E++I+V WVPG+FEI ++A ++ KS KY+A++C+GAV+RG+T+HYD V +  + G+    +NS +P +FGVLT D ++QA+ RAG K+GNKG+E A  AIEM +L
Sbjct:   13 IKIGIVVARFNEFITSKLLSGALDNLKRENVNEKDIEVAWVPGAFEIPLIASKMAKSKKYDAIICLGAVIRGNTSHYDYVCSEVSKGIAQISLNSEIPVMFGVLTTDTIEQAIERAGTKAGNKGSECAQGAIEMVNL 149
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STRPS (6,7-dimethyl-8-ribityllumazine synthase OS=Streptococcus pneumoniae (strain CGSP14) GN=ribH PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 5.575e-37
Identity = 69/137 (50.36%), Postives = 103/137 (75.18%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            ++  +VVARFNE +T  LL GAL+  K+ +V E++I+V WVPG+FEI ++A ++ KS KY+A++C+GAV+RG+T+HYD V +  + G+    +NS +P +FGVLT D ++QA+ RAG K+GNKG+E A  AIEM +L
Sbjct:   13 IKIGIVVARFNEFITSKLLSGALDNLKRENVNEKDIEVAWVPGAFEIPLIASKMAKSKKYDAIICLGAVIRGNTSHYDYVCSEVSKGIAQISLNSEIPVMFGVLTTDTIEQAIERAGTKAGNKGSECAQGAIEMVNL 149
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STRPN (6,7-dimethyl-8-ribityllumazine synthase OS=Streptococcus pneumoniae GN=ribH PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 5.575e-37
Identity = 69/137 (50.36%), Postives = 103/137 (75.18%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            ++  +VVARFNE +T  LL GAL+  K+ +V E++I+V WVPG+FEI ++A ++ KS KY+A++C+GAV+RG+T+HYD V +  + G+    +NS +P +FGVLT D ++QA+ RAG K+GNKG+E A  AIEM +L
Sbjct:   13 IKIGIVVARFNEFITSKLLSGALDNLKRENVNEKDIEVAWVPGAFEIPLIASKMAKSKKYDAIICLGAVIRGNTSHYDYVCSEVSKGIAQISLNSEIPVMFGVLTTDTIEQAIERAGTKAGNKGSECAQGAIEMVNL 149
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STRPJ (6,7-dimethyl-8-ribityllumazine synthase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=ribH PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 5.575e-37
Identity = 69/137 (50.36%), Postives = 103/137 (75.18%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            ++  +VVARFNE +T  LL GAL+  K+ +V E++I+V WVPG+FEI ++A ++ KS KY+A++C+GAV+RG+T+HYD V +  + G+    +NS +P +FGVLT D ++QA+ RAG K+GNKG+E A  AIEM +L
Sbjct:   13 IKIGIVVARFNEFITSKLLSGALDNLKRENVNEKDIEVAWVPGAFEIPLIASKMAKSKKYDAIICLGAVIRGNTSHYDYVCSEVSKGIAQISLNSEIPVMFGVLTTDTIEQAIERAGTKAGNKGSECAQGAIEMVNL 149
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STRPI (6,7-dimethyl-8-ribityllumazine synthase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=ribH PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 5.575e-37
Identity = 69/137 (50.36%), Postives = 103/137 (75.18%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            ++  +VVARFNE +T  LL GAL+  K+ +V E++I+V WVPG+FEI ++A ++ KS KY+A++C+GAV+RG+T+HYD V +  + G+    +NS +P +FGVLT D ++QA+ RAG K+GNKG+E A  AIEM +L
Sbjct:   13 IKIGIVVARFNEFITSKLLSGALDNLKRENVNEKDIEVAWVPGAFEIPLIASKMAKSKKYDAIICLGAVIRGNTSHYDYVCSEVSKGIAQISLNSEIPVMFGVLTTDTIEQAIERAGTKAGNKGSECAQGAIEMVNL 149
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STRP7 (6,7-dimethyl-8-ribityllumazine synthase OS=Streptococcus pneumoniae (strain 70585) GN=ribH PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 5.575e-37
Identity = 69/137 (50.36%), Postives = 103/137 (75.18%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            ++  +VVARFNE +T  LL GAL+  K+ +V E++I+V WVPG+FEI ++A ++ KS KY+A++C+GAV+RG+T+HYD V +  + G+    +NS +P +FGVLT D ++QA+ RAG K+GNKG+E A  AIEM +L
Sbjct:   13 IKIGIVVARFNEFITSKLLSGALDNLKRENVNEKDIEVAWVPGAFEIPLIASKMAKSKKYDAIICLGAVIRGNTSHYDYVCSEVSKGIAQISLNSEIPVMFGVLTTDTIEQAIERAGTKAGNKGSECAQGAIEMVNL 149
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STRP4 (6,7-dimethyl-8-ribityllumazine synthase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=ribH PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 5.575e-37
Identity = 69/137 (50.36%), Postives = 103/137 (75.18%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            ++  +VVARFNE +T  LL GAL+  K+ +V E++I+V WVPG+FEI ++A ++ KS KY+A++C+GAV+RG+T+HYD V +  + G+    +NS +P +FGVLT D ++QA+ RAG K+GNKG+E A  AIEM +L
Sbjct:   13 IKIGIVVARFNEFITSKLLSGALDNLKRENVNEKDIEVAWVPGAFEIPLIASKMAKSKKYDAIICLGAVIRGNTSHYDYVCSEVSKGIAQISLNSEIPVMFGVLTTDTIEQAIERAGTKAGNKGSECAQGAIEMVNL 149
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STRP2 (6,7-dimethyl-8-ribityllumazine synthase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=ribH PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 5.575e-37
Identity = 69/137 (50.36%), Postives = 103/137 (75.18%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            ++  +VVARFNE +T  LL GAL+  K+ +V E++I+V WVPG+FEI ++A ++ KS KY+A++C+GAV+RG+T+HYD V +  + G+    +NS +P +FGVLT D ++QA+ RAG K+GNKG+E A  AIEM +L
Sbjct:   13 IKIGIVVARFNEFITSKLLSGALDNLKRENVNEKDIEVAWVPGAFEIPLIASKMAKSKKYDAIICLGAVIRGNTSHYDYVCSEVSKGIAQISLNSEIPVMFGVLTTDTIEQAIERAGTKAGNKGSECAQGAIEMVNL 149
The following BLAST results are available for this feature:
BLAST of DY258669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RISB_STRZP5.575e-3750.366,7-dimethyl-8-ribityllumazine synthase OS=Strepto... [more]
RISB_STRZJ5.575e-3750.366,7-dimethyl-8-ribityllumazine synthase OS=Strepto... [more]
RISB_STRR65.575e-3750.366,7-dimethyl-8-ribityllumazine synthase OS=Strepto... [more]
RISB_STRPS5.575e-3750.366,7-dimethyl-8-ribityllumazine synthase OS=Strepto... [more]
RISB_STRPN5.575e-3750.366,7-dimethyl-8-ribityllumazine synthase OS=Strepto... [more]
RISB_STRPJ5.575e-3750.366,7-dimethyl-8-ribityllumazine synthase OS=Strepto... [more]
RISB_STRPI5.575e-3750.366,7-dimethyl-8-ribityllumazine synthase OS=Strepto... [more]
RISB_STRP75.575e-3750.366,7-dimethyl-8-ribityllumazine synthase OS=Strepto... [more]
RISB_STRP45.575e-3750.366,7-dimethyl-8-ribityllumazine synthase OS=Strepto... [more]
RISB_STRP25.575e-3750.366,7-dimethyl-8-ribityllumazine synthase OS=Strepto... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DG11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258669 ID=DY258669; Name=DY258669; organism=Citrus clementina; type=EST; length=1234bp
TCAGAACAAAAATGGCTTTAAACCTCAAAACAACAATTCATCACTCTCCT
CTCGCATCATCATCTCGTCAATTCATTAATGGGTTTTCTCCAAAACCAAC
TTCTATGTCCTTTTCACATTCTTCTTCACTCAAAGGATTTGGAACCCAGA
TTGCGATTGAGAGGAAGGAACGTTTATCGTTTGTACAAACGGAAGCTGTG
AGGCATTTGACTGGATTCCTTACAAAAAATGAGGGGCTCCGTTTTGCTTT
GGTTGTTGCACGGTTTAATGAGCTTGTGACAAAACTACTGTTAGAGGGAG
CTTTGGAGACCTTCAAGAAGTATTCAGTTAAAGAAGAAAACATTGATGTT
GTGTGGGTTCCTGGTAGTTTTGAAATTGGTGTTGTTGCACAACAGCTAGG
GAAGTCTGGGAAGTATAATGCAGTTTTGTGTATTGGTGCCGTGGTTAGAG
GTGATACTACTCACTATGATGCTGTAGCTAATTCTGCTGCATCCGGAGTT
CTTTCAGCTGGCATGAATTCAGGTGTTCCATGCATATTTGGTGTCCTGAC
TTGCGATAACATGGACCAGGCTTTGAATCGAGCTGGTGGTAAATCTGGGA
ATAAGGGTGCTGAGGCAGCTTTGACTGCTATTGAAATGGCATCTTTATTT
GAGCACCACCTGAAGTAGTGGTTTCACCAAGAAGAGTTGGACAGAGTCCT
TTTTCCGCTCATATTTTCTTTTTGAGAAAGTGGCCTTTTGTTGTAGTTTC
ATGATACCTGAAGCCTTTGTATGGACAGTTTTGGGATCTGCAAAAGGTTA
GCCTTAGCATTCCAAAATAAGATNAGCAAATTGTTCACTGCCTTCATACT
GGGAAACTTTTTCCTGCGCGTCACCCAGATACTGAAAAAACATTCCGTAA
TGTTCTGAATCAAAAACAATCTGGAATTCTGTATGCCTTCCCAAATGTTT
TTTCTAAATGAAAATAATCAAAAAAAAAGGCATTTGCATCCATGAATTGA
GGGCAAAATTGGAGGGAATATATGGGTGGTTTTTTGAAAAAACGAAAAAG
GGGGGACCTTTGCAACCAACCCTAATTTCCCTGGGTTTTGGGGAAAAAAA
ATTTGGATTTCAGGGGGGAAAAAAAAAAAAAAAGAAAAAGGGGGTATGGG
GTAAAGGTCTTTTGTCTTTGGAAATTTGTCCTAAATTTTTGCCTTATTTT
AGGTAAAATATTTTTCTTTTTTTTTTTTTTTTTA
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