DY258669

Overview
NameDY258669
Unique NameDY258669
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1234
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_PYRKO (6,7-dimethyl-8-ribityllumazine synthase OS=Pyrococcus kodakaraensis GN=ribH PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.622e-36
Identity = 81/143 (56.64%), Postives = 109/143 (76.22%), Query Frame = 3 
Query:  225 KNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFE 653
            K EG++  +VVARFN+L+T  LL GAL+ F+++SV+E  +DVV VPGSFEI +VA++L +SGKY+AVL +GAVVRG+T H+D VAN  A GV    ++SGVP IFGV+T ++  Q  NRAG KS NKG E A+ A+EMA+L +
Sbjct:   11 KGEGVKIGVVVARFNDLLTNELLSGALDCFERHSVEE--VDVVKVPGSFEIPLVAKKLAESGKYDAVLALGAVVRGETKHFDLVANEVAKGVAKVSLDSGVPVIFGVITVEDELQGFNRAGVKS-NKGFEYAMAALEMANLMK 150
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_BACAM (6,7-dimethyl-8-ribityllumazine synthase OS=Bacillus amyloliquefaciens GN=ribH PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.622e-36
Identity = 71/138 (51.45%), Postives = 102/138 (73.91%), Query Frame = 3 
Query:  234 GLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 647
            GL+  +VV RFNE +T  LL GA +T  ++ V+  +IDV WVPG+FEI   A+++ ++ KY+AV+ +G V+RG TTHYD V N AA G+  AG  +GVP IFG++T + ++QA+ RAG K+GNKGA+ A++AIEMA+L
Sbjct:   12 GLKIGIVVGRFNEFITSKLLSGAEDTLIRHGVESNDIDVAWVPGAFEIPFAAKKMAETKKYDAVITLGTVIRGATTHYDYVCNEAAKGIAQAGTATGVPVIFGIVTTETIEQAIERAGTKAGNKGADCAVSAIEMANL 149
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STAAW (6,7-dimethyl-8-ribityllumazine synthase OS=Staphylococcus aureus (strain MW2) GN=ribH PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.119e-36
Identity = 73/139 (52.52%), Postives = 105/139 (75.54%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFE 653
            L+ A+VV+RFN+ +T  LLEGA +T  ++ V E+NIDV +VPG+FEI +VA++L  SG Y+A++ +G V+RG T+HYD V N  A GV      + VP IFG+LT ++++QA+ RAG K+GNKGAEAA++AIEMA+L +
Sbjct:   12 LKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPLVAKKLASSGNYDAIITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESIEQAVERAGTKAGNKGAEAAVSAIEMANLLK 150
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STAAU (6,7-dimethyl-8-ribityllumazine synthase OS=Staphylococcus aureus GN=ribH PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.119e-36
Identity = 73/139 (52.52%), Postives = 105/139 (75.54%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFE 653
            L+ A+VV+RFN+ +T  LLEGA +T  ++ V E+NIDV +VPG+FEI +VA++L  SG Y+A++ +G V+RG T+HYD V N  A GV      + VP IFG+LT ++++QA+ RAG K+GNKGAEAA++AIEMA+L +
Sbjct:   12 LKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPLVAKKLASSGNYDAIITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESIEQAVERAGTKAGNKGAEAAVSAIEMANLLK 150
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STAAS (6,7-dimethyl-8-ribityllumazine synthase OS=Staphylococcus aureus (strain MSSA476) GN=ribH PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.119e-36
Identity = 73/139 (52.52%), Postives = 105/139 (75.54%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFE 653
            L+ A+VV+RFN+ +T  LLEGA +T  ++ V E+NIDV +VPG+FEI +VA++L  SG Y+A++ +G V+RG T+HYD V N  A GV      + VP IFG+LT ++++QA+ RAG K+GNKGAEAA++AIEMA+L +
Sbjct:   12 LKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPLVAKKLASSGNYDAIITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESIEQAVERAGTKAGNKGAEAAVSAIEMANLLK 150
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STAAN (6,7-dimethyl-8-ribityllumazine synthase OS=Staphylococcus aureus (strain N315) GN=ribH PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.119e-36
Identity = 73/139 (52.52%), Postives = 105/139 (75.54%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFE 653
            L+ A+VV+RFN+ +T  LLEGA +T  ++ V E+NIDV +VPG+FEI +VA++L  SG Y+A++ +G V+RG T+HYD V N  A GV      + VP IFG+LT ++++QA+ RAG K+GNKGAEAA++AIEMA+L +
Sbjct:   12 LKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPLVAKKLASSGNYDAIITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESIEQAVERAGTKAGNKGAEAAVSAIEMANLLK 150
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STAAM (6,7-dimethyl-8-ribityllumazine synthase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=ribH PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.119e-36
Identity = 73/139 (52.52%), Postives = 105/139 (75.54%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFE 653
            L+ A+VV+RFN+ +T  LLEGA +T  ++ V E+NIDV +VPG+FEI +VA++L  SG Y+A++ +G V+RG T+HYD V N  A GV      + VP IFG+LT ++++QA+ RAG K+GNKGAEAA++AIEMA+L +
Sbjct:   12 LKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPLVAKKLASSGNYDAIITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESIEQAVERAGTKAGNKGAEAAVSAIEMANLLK 150
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STAA9 (6,7-dimethyl-8-ribityllumazine synthase OS=Staphylococcus aureus (strain JH9) GN=ribH PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.119e-36
Identity = 73/139 (52.52%), Postives = 105/139 (75.54%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFE 653
            L+ A+VV+RFN+ +T  LLEGA +T  ++ V E+NIDV +VPG+FEI +VA++L  SG Y+A++ +G V+RG T+HYD V N  A GV      + VP IFG+LT ++++QA+ RAG K+GNKGAEAA++AIEMA+L +
Sbjct:   12 LKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPLVAKKLASSGNYDAIITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESIEQAVERAGTKAGNKGAEAAVSAIEMANLLK 150
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STAA2 (6,7-dimethyl-8-ribityllumazine synthase OS=Staphylococcus aureus (strain JH1) GN=ribH PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.119e-36
Identity = 73/139 (52.52%), Postives = 105/139 (75.54%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFE 653
            L+ A+VV+RFN+ +T  LLEGA +T  ++ V E+NIDV +VPG+FEI +VA++L  SG Y+A++ +G V+RG T+HYD V N  A GV      + VP IFG+LT ++++QA+ RAG K+GNKGAEAA++AIEMA+L +
Sbjct:   12 LKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPLVAKKLASSGNYDAIITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESIEQAVERAGTKAGNKGAEAAVSAIEMANLLK 150
[Close]
BLAST of DY258669 vs. ExPASy Swiss-Prot
Match: RISB_STAA1 (6,7-dimethyl-8-ribityllumazine synthase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=ribH PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.119e-36
Identity = 73/139 (52.52%), Postives = 105/139 (75.54%), Query Frame = 3 
Query:  237 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYNAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFE 653
            L+ A+VV+RFN+ +T  LLEGA +T  ++ V E+NIDV +VPG+FEI +VA++L  SG Y+A++ +G V+RG T+HYD V N  A GV      + VP IFG+LT ++++QA+ RAG K+GNKGAEAA++AIEMA+L +
Sbjct:   12 LKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPLVAKKLASSGNYDAIITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESIEQAVERAGTKAGNKGAEAAVSAIEMANLLK 150
The following BLAST results are available for this feature:
BLAST of DY258669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RISB_PYRKO1.622e-3656.646,7-dimethyl-8-ribityllumazine synthase OS=Pyrococ... [more]
RISB_BACAM1.622e-3651.456,7-dimethyl-8-ribityllumazine synthase OS=Bacillu... [more]
RISB_STAAW2.119e-3652.526,7-dimethyl-8-ribityllumazine synthase OS=Staphyl... [more]
RISB_STAAU2.119e-3652.526,7-dimethyl-8-ribityllumazine synthase OS=Staphyl... [more]
RISB_STAAS2.119e-3652.526,7-dimethyl-8-ribityllumazine synthase OS=Staphyl... [more]
RISB_STAAN2.119e-3652.526,7-dimethyl-8-ribityllumazine synthase OS=Staphyl... [more]
RISB_STAAM2.119e-3652.526,7-dimethyl-8-ribityllumazine synthase OS=Staphyl... [more]
RISB_STAA92.119e-3652.526,7-dimethyl-8-ribityllumazine synthase OS=Staphyl... [more]
RISB_STAA22.119e-3652.526,7-dimethyl-8-ribityllumazine synthase OS=Staphyl... [more]
RISB_STAA12.119e-3652.526,7-dimethyl-8-ribityllumazine synthase OS=Staphyl... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DG11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258669 ID=DY258669; Name=DY258669; organism=Citrus clementina; type=EST; length=1234bp
TCAGAACAAAAATGGCTTTAAACCTCAAAACAACAATTCATCACTCTCCT
CTCGCATCATCATCTCGTCAATTCATTAATGGGTTTTCTCCAAAACCAAC
TTCTATGTCCTTTTCACATTCTTCTTCACTCAAAGGATTTGGAACCCAGA
TTGCGATTGAGAGGAAGGAACGTTTATCGTTTGTACAAACGGAAGCTGTG
AGGCATTTGACTGGATTCCTTACAAAAAATGAGGGGCTCCGTTTTGCTTT
GGTTGTTGCACGGTTTAATGAGCTTGTGACAAAACTACTGTTAGAGGGAG
CTTTGGAGACCTTCAAGAAGTATTCAGTTAAAGAAGAAAACATTGATGTT
GTGTGGGTTCCTGGTAGTTTTGAAATTGGTGTTGTTGCACAACAGCTAGG
GAAGTCTGGGAAGTATAATGCAGTTTTGTGTATTGGTGCCGTGGTTAGAG
GTGATACTACTCACTATGATGCTGTAGCTAATTCTGCTGCATCCGGAGTT
CTTTCAGCTGGCATGAATTCAGGTGTTCCATGCATATTTGGTGTCCTGAC
TTGCGATAACATGGACCAGGCTTTGAATCGAGCTGGTGGTAAATCTGGGA
ATAAGGGTGCTGAGGCAGCTTTGACTGCTATTGAAATGGCATCTTTATTT
GAGCACCACCTGAAGTAGTGGTTTCACCAAGAAGAGTTGGACAGAGTCCT
TTTTCCGCTCATATTTTCTTTTTGAGAAAGTGGCCTTTTGTTGTAGTTTC
ATGATACCTGAAGCCTTTGTATGGACAGTTTTGGGATCTGCAAAAGGTTA
GCCTTAGCATTCCAAAATAAGATNAGCAAATTGTTCACTGCCTTCATACT
GGGAAACTTTTTCCTGCGCGTCACCCAGATACTGAAAAAACATTCCGTAA
TGTTCTGAATCAAAAACAATCTGGAATTCTGTATGCCTTCCCAAATGTTT
TTTCTAAATGAAAATAATCAAAAAAAAAGGCATTTGCATCCATGAATTGA
GGGCAAAATTGGAGGGAATATATGGGTGGTTTTTTGAAAAAACGAAAAAG
GGGGGACCTTTGCAACCAACCCTAATTTCCCTGGGTTTTGGGGAAAAAAA
ATTTGGATTTCAGGGGGGAAAAAAAAAAAAAAAGAAAAAGGGGGTATGGG
GTAAAGGTCTTTTGTCTTTGGAAATTTGTCCTAAATTTTTGCCTTATTTT
AGGTAAAATATTTTTCTTTTTTTTTTTTTTTTTA
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